RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 TRAV25A0A0B4J276 109 aa11.78□□□□□ -0.52
SYNC-202ENST00000409190 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.53
SYNC-202ENST00000409190 LINC00643Q86TS7 51 aa11.77□□□□□ -0.53
SYNC-202ENST00000409190 TRBV7-7A0A0K0K1E9 115 aa11.77□□□□□ -0.53
SYNC-202ENST00000409190 A0A087WVE0 104 aa11.76□□□□□ -0.53
SYNC-202ENST00000409190 RPL28P46779 137 aaKnown RBP11.76□□□□□ -0.53
SYNC-202ENST00000409190 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
SYNC-202ENST00000409190 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
SYNC-202ENST00000409190 MRPL23Q16540 153 aaKnown RBP11.76□□□□□ -0.53
SYNC-202ENST00000409190 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
SYNC-202ENST00000409190 ATRQ13535 2644 aa11.76□□□□□ -0.53
SYNC-202ENST00000409190 TENM4Q6N022 2769 aa11.75□□□□□ -0.53
SYNC-202ENST00000409190 LINC00959A0A1B0GUT2 108 aa11.75□□□□□ -0.53
SYNC-202ENST00000409190 ACYP1P07311 99 aa11.75□□□□□ -0.53
SYNC-202ENST00000409190 INAFM2P0DMQ5 153 aa11.75□□□□□ -0.53
SYNC-202ENST00000409190 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
SYNC-202ENST00000409190 LINC00482Q8N8I6 264 aa11.73□□□□□ -0.53
SYNC-202ENST00000409190 FAM19A3Q7Z5A8 133 aa11.73□□□□□ -0.53
SYNC-202ENST00000409190 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
SYNC-202ENST00000409190 HTN3P15516 51 aa11.72□□□□□ -0.53
SYNC-202ENST00000409190 LINC00846Q9NV44 126 aa11.72□□□□□ -0.53
SYNC-202ENST00000409190 A0A087WZ39 114 aa11.71□□□□□ -0.53
SYNC-202ENST00000409190 WFDC9Q8NEX5 89 aa11.71□□□□□ -0.53
SYNC-202ENST00000409190 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
SYNC-202ENST00000409190 CSNK1G2-AS1Q8NCQ2 148 aa11.71□□□□□ -0.54
SYNC-202ENST00000409190 LINC00269Q8N2A0 174 aa11.7□□□□□ -0.54
SYNC-202ENST00000409190 SMR3AQ99954 134 aa11.7□□□□□ -0.54
SYNC-202ENST00000409190 IGLV1-51P01701 117 aa11.7□□□□□ -0.54
SYNC-202ENST00000409190 HIST1H4AP62805 103 aaKnown RBP11.7□□□□□ -0.54
SYNC-202ENST00000409190 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
SYNC-202ENST00000409190 PF4P02776 101 aa11.69□□□□□ -0.54
SYNC-202ENST00000409190 SS18Q15532 418 aa11.68□□□□□ -0.54
SYNC-202ENST00000409190 UNC79Q9P2D8 2635 aa11.68□□□□□ -0.54
SYNC-202ENST00000409190 CXCL5P42830 114 aa11.68□□□□□ -0.54
SYNC-202ENST00000409190 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
SYNC-202ENST00000409190 FAM222AQ5U5X8 452 aa11.68□□□□□ -0.54
SYNC-202ENST00000409190 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
SYNC-202ENST00000409190 TENM1Q9UKZ4 2725 aa11.67□□□□□ -0.54
SYNC-202ENST00000409190 TMEM86BQ8N661 226 aa11.67□□□□□ -0.54
SYNC-202ENST00000409190 DEFB135Q30KP9 77 aa11.66□□□□□ -0.54
SYNC-202ENST00000409190 SPATA3Q8NHX4 192 aa11.66□□□□□ -0.54
SYNC-202ENST00000409190 H0YGX0 51 aa11.65□□□□□ -0.54
SYNC-202ENST00000409190 OVOL2Q9BRP0 275 aa11.65□□□□□ -0.54
SYNC-202ENST00000409190 hADV29S1A0JD25 119 aa11.65□□□□□ -0.54
SYNC-202ENST00000409190 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.54
SYNC-202ENST00000409190 A0A1B0GX51 115 aa11.64□□□□□ -0.55
SYNC-202ENST00000409190 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
SYNC-202ENST00000409190 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
SYNC-202ENST00000409190 IMUPQ9GZP8 106 aa11.64□□□□□ -0.55
SYNC-202ENST00000409190 C6orf223Q8N319 242 aa11.62□□□□□ -0.55
SYNC-202ENST00000409190 HILS1P60008 231 aa11.62□□□□□ -0.55
SYNC-202ENST00000409190 CYSTM1Q9H1C7 97 aa11.61□□□□□ -0.55
SYNC-202ENST00000409190 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
SYNC-202ENST00000409190 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
SYNC-202ENST00000409190 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
SYNC-202ENST00000409190 UQCRQO14949 82 aa11.6□□□□□ -0.55
SYNC-202ENST00000409190 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
SYNC-202ENST00000409190 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
SYNC-202ENST00000409190 PRO0255Q9UI72 69 aa11.59□□□□□ -0.55
SYNC-202ENST00000409190 Q8NDZ9 215 aa11.59□□□□□ -0.55
SYNC-202ENST00000409190 PDZD2O15018 2839 aa11.58□□□□□ -0.56
SYNC-202ENST00000409190 C10orf25Q5T742 122 aa11.58□□□□□ -0.56
SYNC-202ENST00000409190 REG3AQ06141 175 aa11.57□□□□□ -0.56
SYNC-202ENST00000409190 TRRAPQ9Y4A5 3859 aa11.57□□□□□ -0.56
SYNC-202ENST00000409190 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
SYNC-202ENST00000409190 TRAV23DV6A0A075B6W5 121 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 COX7CP15954 63 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 NANOS2P60321 138 aaKnown RBP11.56□□□□□ -0.56
SYNC-202ENST00000409190 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 Q8IZM0 81 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 X6R8D5 127 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 HIVEP1P15822 2718 aa11.56□□□□□ -0.56
SYNC-202ENST00000409190 RPL18AQ02543 176 aaKnown RBP11.55□□□□□ -0.56
SYNC-202ENST00000409190 FAM19A1Q7Z5A9 133 aa11.55□□□□□ -0.56
SYNC-202ENST00000409190 Q8N814 137 aa11.55□□□□□ -0.56
SYNC-202ENST00000409190 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 XAGE1AQ9HD64 81 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 OTOGQ6ZRI0 2925 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 PKD1L1Q8TDX9 2849 aa11.54□□□□□ -0.56
SYNC-202ENST00000409190 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
SYNC-202ENST00000409190 ATOX1O00244 68 aa11.53□□□□□ -0.56
SYNC-202ENST00000409190 DAD1P61803 113 aa11.53□□□□□ -0.56
SYNC-202ENST00000409190 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
SYNC-202ENST00000409190 CELA1Q9UNI1 258 aa11.52□□□□□ -0.56
SYNC-202ENST00000409190 KIAA0087Q14695 138 aa11.51□□□□□ -0.57
SYNC-202ENST00000409190 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
SYNC-202ENST00000409190 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
SYNC-202ENST00000409190 KIR2DL5BQ8NHK3 375 aa11.51□□□□□ -0.57
SYNC-202ENST00000409190 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
SYNC-202ENST00000409190 IGHV4-28A0A0C4DH34 117 aa11.5□□□□□ -0.57
SYNC-202ENST00000409190 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
SYNC-202ENST00000409190 CCKP06307 115 aa11.5□□□□□ -0.57
SYNC-202ENST00000409190 Q6JHZ5 121 aa11.5□□□□□ -0.57
SYNC-202ENST00000409190 FLNBO75369 2602 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms