RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 NUPR2A6NF83 97 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 TMEM258P61165 79 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 ATP5EP2Q5VTU8 51 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 NOTCH1P46531 2555 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 IGHV3OR16-9A0A0B4J2B5 98 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 ADAMTSL4-AS1Q5T5F5 129 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 HRCT1Q6UXD1 115 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 B9D2Q9BPU9 175 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 NHLRC4P0CG21 123 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 UNQ6190/PRO20217Q6UXQ8 127 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 KRTAP24-1Q3LI83 254 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 C14orf132Q9NPU4 83 aa3.32□□□□□ -1.88
PCDH11X-207ENST00000406881 ZNF292O60281 2723 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 IGKV3D-7A0A0C4DH55 119 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 IGKV2-24A0A0C4DH68 120 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 KRTAP1-1Q07627 177 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 SBSPONQ8IVN8 264 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 LINC00474Q9P2X8 69 aa3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 SETD2Q9BYW2 2564 aaPredicted RBP3.31□□□□□ -1.88
PCDH11X-207ENST00000406881 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 Q6Q795 121 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 Q8NAQ8 132 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 LINC00526Q96FQ7 95 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 IMUPQ9GZP8 106 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 C19orf73Q9NVV2 129 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 NDUFB1O75438 58 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 PRB2P02812 416 aaPredicted RBP3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 CDIP1Q9H305 208 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 MGAM2Q2M2H8 2515 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 SLPIP03973 132 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 C1orf195Q5TG92 126 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 Q6ZQY7 126 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 FAM19A1Q7Z5A9 133 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 WFDC10BQ8IUB3 73 aa3.3□□□□□ -1.88
PCDH11X-207ENST00000406881 RANBP2P49792 3224 aaKnown RBP3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 USP17L23D6RBM5 183 aa3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 COX7CP15954 63 aa3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
PCDH11X-207ENST00000406881 PRRC2CQ9Y520 2896 aaKnown RBP3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 ITPR3Q14573 2671 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 MUC4Q99102 2169 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 Q8N814 137 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 Q9UF83 564 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 BPY2O14599 106 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 BRCA2P51587 3418 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 TRBV10-3A0A0K0K1G6 114 aa3.28□□□□□ -1.88
PCDH11X-207ENST00000406881 FAM236DA0A1B0GTK5 79 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 GIG44P09565 113 aaPredicted RBP3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 FAM236CP0DP71 79 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 C9orf116Q5BN46 136 aaPredicted RBP3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 C20orf197Q8N268 126 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 ESRGQ1W209 222 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 PRYO14603 147 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 SEC61GP60059 68 aa3.27□□□□□ -1.89
PCDH11X-207ENST00000406881 IGKV2-28A0A075B6P5 120 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 IGKV2D-28P01615 120 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 KRTAP10-3P60369 221 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 LINC00337Q8N6G1 96 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 Q6JHZ5 121 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 SDIM1Q6ZPB5 146 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 UPK3BQ9BT76 320 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 CCKP06307 115 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 Q6ZRU5 148 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 MP68P56378 58 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 LINC00575Q6W349 94 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 SERP2Q8N6R1 65 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
PCDH11X-207ENST00000406881 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 ZNF575Q86XF7 245 aa3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 A0A087WYN8 130 aa3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 C4orf48Q5BLP8 95 aa3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 MKI67P46013 3256 aaKnown RBP3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 TRBV7-6A0A0J9YX20 115 aa3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 PRR3P79522 188 aaKnown RBP3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 LITAFQ99732 161 aa3.25□□□□□ -1.89
PCDH11X-207ENST00000406881 REG3GQ6UW15 175 aa3.24□□□□□ -1.89
PCDH11X-207ENST00000406881 SOSTDC1Q6X4U4 206 aa3.24□□□□□ -1.89
PCDH11X-207ENST00000406881 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
PCDH11X-207ENST00000406881 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms