RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 CELA1Q9UNI1 258 aa3.54□□□□□ -1.84
HDAC9-204ENST00000406451 ATOX1O00244 68 aa3.54□□□□□ -1.84
HDAC9-204ENST00000406451 Q6ZQY7 126 aa3.54□□□□□ -1.84
HDAC9-204ENST00000406451 MAPKAPK5-AS1Q8N8E1 139 aa3.54□□□□□ -1.84
HDAC9-204ENST00000406451 CSDC2Q9Y534 153 aaKnown RBP3.54□□□□□ -1.84
HDAC9-204ENST00000406451 IGIPA6NJ69 53 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 TRIAP1O43715 76 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
HDAC9-204ENST00000406451 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
HDAC9-204ENST00000406451 LINC00694P0DN24 101 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 POM121L12Q8N7R1 296 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 UTRNP46939 3433 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 LINC01556Q5JQF7 62 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
HDAC9-204ENST00000406451 COX6A2Q02221 97 aa3.53□□□□□ -1.85
HDAC9-204ENST00000406451 C1orf137Q5JT78 98 aa3.53□□□□□ -1.85
HDAC9-204ENST00000406451 TMEM258P61165 79 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 C10orf25Q5T742 122 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 CASC2Q6XLA1 102 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 NDUFC2-KCTD14E9PQ53 114 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 Q6ZSN1 163 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 SBSPONQ8IVN8 264 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 FAM236AA0A1B0GUQ0 79 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 FAM236BA0A1B0GV22 79 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 C3orf84H3BNL1 204 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 SEC61GP60059 68 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 CEP350Q5VT06 3117 aa3.52□□□□□ -1.85
HDAC9-204ENST00000406451 TEX49A0A1B0GTD5 131 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 ATP5EP2Q5VTU8 51 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.51□□□□□ -1.85
HDAC9-204ENST00000406451 C11orf72Q8NBR9 251 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 BAHCC1Q9P281 2608 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 MRPL55Q7Z7F7 128 aaKnown RBP3.51□□□□□ -1.85
HDAC9-204ENST00000406451 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 LINC00643Q86TS7 51 aa3.51□□□□□ -1.85
HDAC9-204ENST00000406451 WWC2-AS2Q96NR7 200 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 AKAP13Q12802 2813 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 SCXQ7RTU7 201 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 AMELXQ99217 191 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 TEX15Q9BXT5 2789 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 CHD7Q9P2D1 2997 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 PRYO14603 147 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 LINC01561Q8N1V8 128 aa3.5□□□□□ -1.85
HDAC9-204ENST00000406451 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
HDAC9-204ENST00000406451 ESRGQ1W209 222 aa3.49□□□□□ -1.85
HDAC9-204ENST00000406451 H3BNG1 76 aa3.49□□□□□ -1.85
HDAC9-204ENST00000406451 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
HDAC9-204ENST00000406451 X6R8D5 127 aa3.49□□□□□ -1.85
HDAC9-204ENST00000406451 TRANK1O15050 2925 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 CR1P17927 2039 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 LST1O00453 97 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 Q6JHZ5 121 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 ENHOQ6UWT2 76 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 SPATA3Q8NHX4 192 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 C5orf42Q9H799 3197 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
HDAC9-204ENST00000406451 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 Q6ZRU5 148 aa3.48□□□□□ -1.85
HDAC9-204ENST00000406451 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 NBDYA0A0U1RRE5 68 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 Q8NAQ8 132 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 Q9BRP9 147 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 C16orf90A8MZG2 172 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 C2orf91Q6ZV80 131 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 A0A096LNT2 108 aa3.47□□□□□ -1.85
HDAC9-204ENST00000406451 FAM229AH3BQW9 127 aa3.46□□□□□ -1.85
HDAC9-204ENST00000406451 LINC00315P59091 139 aa3.46□□□□□ -1.85
HDAC9-204ENST00000406451 Q8N814 137 aa3.46□□□□□ -1.85
HDAC9-204ENST00000406451 CHD9Q3L8U1 2897 aa3.46□□□□□ -1.86
HDAC9-204ENST00000406451 COL6A5A8TX70 2615 aa3.46□□□□□ -1.86
HDAC9-204ENST00000406451 KIF25-AS1Q9Y6Z4 181 aa3.46□□□□□ -1.86
HDAC9-204ENST00000406451 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
HDAC9-204ENST00000406451 NDUFC2O95298 119 aa3.46□□□□□ -1.86
HDAC9-204ENST00000406451 PRLHP81277 87 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 K7EIL1 84 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 ADAMTSL4-AS1Q5T5F5 129 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 URB1-AS1Q96HZ7 61 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 B5MCH6 92 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 RTL8CO15255 209 aa3.45□□□□□ -1.86
HDAC9-204ENST00000406451 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 LINC00588Q9Y4M8 146 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 IGSF10Q6WRI0 2623 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 LINC00310P59036 64 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 KRTAP10-11P60412 298 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 CHD6Q8TD26 2715 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 XGP55808 180 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
HDAC9-204ENST00000406451 IGHV6-1A0A0B4J1U7 121 aa3.43□□□□□ -1.86
HDAC9-204ENST00000406451 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
HDAC9-204ENST00000406451 C3orf22Q8N5N4 141 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms