RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NTN5Q8WTR8 489 aaPredicted RBP14.44□□□□□ -0.1
EPCAM-202ENST00000405271 C2orf48Q96LS8 159 aa14.44□□□□□ -0.1
EPCAM-202ENST00000405271 NDUFA12Q9UI09 145 aa14.44□□□□□ -0.1
EPCAM-202ENST00000405271 CKS1BP61024 79 aa14.43□□□□□ -0.1
EPCAM-202ENST00000405271 WFDC2Q14508 124 aa14.43□□□□□ -0.1
EPCAM-202ENST00000405271 ZNF815PA8K554 130 aa14.42□□□□□ -0.1
EPCAM-202ENST00000405271 PCP2Q8IVA1 136 aa14.42□□□□□ -0.1
EPCAM-202ENST00000405271 ZNF625Q96I27 306 aaPredicted RBP14.42□□□□□ -0.1
EPCAM-202ENST00000405271 MYMXA0A1B0GTQ4 84 aa14.41□□□□□ -0.1
EPCAM-202ENST00000405271 TTTY13Q9BZ97 58 aa14.41□□□□□ -0.1
EPCAM-202ENST00000405271 DNAH17Q9UFH2 4485 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 A0A087WTM6 91 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 HERV-K104P63124 156 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 BOD1L2Q8IYS8 172 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 LINC00526Q96FQ7 95 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 CAMK2N2Q96S95 79 aa14.4□□□□□ -0.1
EPCAM-202ENST00000405271 DLEU1O43261 78 aa14.39□□□□□ -0.11
EPCAM-202ENST00000405271 C14orf144Q96I85 54 aa14.39□□□□□ -0.11
EPCAM-202ENST00000405271 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
EPCAM-202ENST00000405271 SLC25A34Q6PIV7 304 aa14.37□□□□□ -0.11
EPCAM-202ENST00000405271 A0A1B0GVY2 172 aa14.36□□□□□ -0.11
EPCAM-202ENST00000405271 SYCNQ0VAF6 134 aa14.36□□□□□ -0.11
EPCAM-202ENST00000405271 Q8N814 137 aa14.36□□□□□ -0.11
EPCAM-202ENST00000405271 TRBV30A0A0K0K1B3 111 aa14.35□□□□□ -0.11
EPCAM-202ENST00000405271 EREGO14944 169 aa14.35□□□□□ -0.11
EPCAM-202ENST00000405271 CARD19Q96LW7 228 aa14.35□□□□□ -0.11
EPCAM-202ENST00000405271 UQCR10Q9UDW1 63 aa14.35□□□□□ -0.11
EPCAM-202ENST00000405271 CNBPP62633 177 aaKnown RBP14.34□□□□□ -0.11
EPCAM-202ENST00000405271 TNP2Q05952 138 aa14.34□□□□□ -0.11
EPCAM-202ENST00000405271 UNQ6190/PRO20217Q6UXQ8 127 aa14.34□□□□□ -0.11
EPCAM-202ENST00000405271 Q6ZRU5 148 aa14.34□□□□□ -0.11
EPCAM-202ENST00000405271 A0A0J9YXY3 114 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 TSTD3H0UI37 97 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 C10orf25Q5T742 122 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 SCGB1D4Q6XE38 83 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 PRO1933Q9H354 126 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 PKHD1P08F94 4074 aa14.33□□□□□ -0.12
EPCAM-202ENST00000405271 LINC00587B1AMM8 73 aa14.32□□□□□ -0.12
EPCAM-202ENST00000405271 PKD1P98161 4303 aa14.32□□□□□ -0.12
EPCAM-202ENST00000405271 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.31□□□□□ -0.12
EPCAM-202ENST00000405271 MEIG1Q5JSS6 88 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 C6orf48Q9UBA6 75 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 TP73-AS1Q9UF72 201 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.31□□□□□ -0.12
EPCAM-202ENST00000405271 SLPIP03973 132 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 RNF151Q2KHN1 245 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 ERG28Q9UKR5 140 aa14.31□□□□□ -0.12
EPCAM-202ENST00000405271 TIMM17BO60830 172 aa14.3□□□□□ -0.12
EPCAM-202ENST00000405271 COX17Q14061 63 aa14.29□□□□□ -0.12
EPCAM-202ENST00000405271 MIEN1Q9BRT3 115 aa14.29□□□□□ -0.12
EPCAM-202ENST00000405271 CIRBPQ14011 172 aaKnown RBP14.28□□□□□ -0.12
EPCAM-202ENST00000405271 TMEM238C9JI98 176 aa14.27□□□□□ -0.12
EPCAM-202ENST00000405271 HIGD1BQ9P298 99 aa14.27□□□□□ -0.12
EPCAM-202ENST00000405271 C2orf91Q6ZV80 131 aa14.25□□□□□ -0.13
EPCAM-202ENST00000405271 SMIM13P0DJ93 91 aa14.25□□□□□ -0.13
EPCAM-202ENST00000405271 C9orf116Q5BN46 136 aaPredicted RBP14.25□□□□□ -0.13
EPCAM-202ENST00000405271 PFN2P35080 140 aa14.24□□□□□ -0.13
EPCAM-202ENST00000405271 LITAFQ99732 161 aa14.24□□□□□ -0.13
EPCAM-202ENST00000405271 SPANXB1Q9NS25 103 aaPredicted RBP14.24□□□□□ -0.13
EPCAM-202ENST00000405271 PKIGQ9Y2B9 76 aa14.24□□□□□ -0.13
EPCAM-202ENST00000405271 TLX1NBP0CAT3 122 aa14.23□□□□□ -0.13
EPCAM-202ENST00000405271 HNRNPA3P51991 378 aaKnown RBP14.23□□□□□ -0.13
EPCAM-202ENST00000405271 LINC00158P58513 81 aa14.23□□□□□ -0.13
EPCAM-202ENST00000405271 C9orf163Q8N9P6 203 aa14.22□□□□□ -0.13
EPCAM-202ENST00000405271 SPANXDQ9BXN6 97 aa14.21□□□□□ -0.13
EPCAM-202ENST00000405271 SPANXCQ9NY87 97 aa14.21□□□□□ -0.13
EPCAM-202ENST00000405271 A0A0U1RRA0 63 aa14.2□□□□□ -0.14
EPCAM-202ENST00000405271 NDUFC2-KCTD14E9PQ53 114 aa14.2□□□□□ -0.14
EPCAM-202ENST00000405271 Q6ZVH6 145 aa14.2□□□□□ -0.14
EPCAM-202ENST00000405271 LOC107984640A0A0U1RRK4 108 aa14.2□□□□□ -0.14
EPCAM-202ENST00000405271 KIAA1109Q2LD37 5005 aa14.19□□□□□ -0.14
EPCAM-202ENST00000405271 ADAMTSL4-AS1Q5T5F5 129 aa14.19□□□□□ -0.14
EPCAM-202ENST00000405271 MIR7-3HGQ8N6C7 128 aa14.19□□□□□ -0.14
EPCAM-202ENST00000405271 IGLV5-52A0A0A0MRZ9 124 aa14.18□□□□□ -0.14
EPCAM-202ENST00000405271 DNAH11Q96DT5 4516 aa14.18□□□□□ -0.14
EPCAM-202ENST00000405271 GCSHP23434 173 aa14.17□□□□□ -0.14
EPCAM-202ENST00000405271 SRSF9Q13242 221 aaKnown RBP eCLIP14.17□□□□□ -0.14
EPCAM-202ENST00000405271 RPL18AQ02543 176 aaKnown RBP14.16□□□□□ -0.14
EPCAM-202ENST00000405271 TAL2Q16559 108 aa14.16□□□□□ -0.14
EPCAM-202ENST00000405271 DAND5Q8N907 189 aa14.16□□□□□ -0.14
EPCAM-202ENST00000405271 DDTP30046 118 aa14.15□□□□□ -0.14
EPCAM-202ENST00000405271 COPS9Q8WXC6 57 aa14.15□□□□□ -0.14
EPCAM-202ENST00000405271 HIST1H4GQ99525 98 aa14.15□□□□□ -0.14
EPCAM-202ENST00000405271 DYNC1H1Q14204 4646 aaKnown RBP14.15□□□□□ -0.14
EPCAM-202ENST00000405271 Q6ZRP5 223 aa14.15□□□□□ -0.14
EPCAM-202ENST00000405271 PGPEP1Q9NXJ5 209 aa14.15□□□□□ -0.14
EPCAM-202ENST00000405271 IFITM1P13164 125 aa14.14□□□□□ -0.15
EPCAM-202ENST00000405271 HSD52Q0P140 79 aa14.14□□□□□ -0.15
EPCAM-202ENST00000405271 PPDPFQ9H3Y8 114 aa14.14□□□□□ -0.15
EPCAM-202ENST00000405271 SND1-IT1Q9HBX3 110 aa14.14□□□□□ -0.15
EPCAM-202ENST00000405271 PTTG1IPP53801 180 aa14.13□□□□□ -0.15
EPCAM-202ENST00000405271 KRTAP10-2P60368 255 aa14.13□□□□□ -0.15
EPCAM-202ENST00000405271 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
EPCAM-202ENST00000405271 LINC00308Q8TCZ7 52 aa14.11□□□□□ -0.15
EPCAM-202ENST00000405271 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
EPCAM-202ENST00000405271 HERC2O95714 4834 aa14.11□□□□□ -0.15
EPCAM-202ENST00000405271 LOC107984156A0A0G2JMH3 177 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 C16orf90A8MZG2 172 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 ARL17AQ8IVW1 177 aa14.1□□□□□ -0.15
EPCAM-202ENST00000405271 FUSP35637 526 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms