RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 NDUFA1O15239 70 aa17.51■□□□□ 0.39
CGREF1-204ENST00000402550 FUSP35637 526 aaKnown RBP eCLIP17.51■□□□□ 0.39
CGREF1-204ENST00000402550 LGALS3P17931 250 aaKnown RBP17.5■□□□□ 0.39
CGREF1-204ENST00000402550 J3QQQ9 107 aa17.49■□□□□ 0.39
CGREF1-204ENST00000402550 SYCNQ0VAF6 134 aa17.49■□□□□ 0.39
CGREF1-204ENST00000402550 SFTA2Q6UW10 78 aa17.49■□□□□ 0.39
CGREF1-204ENST00000402550 CNBPP62633 177 aaKnown RBP17.49■□□□□ 0.39
CGREF1-204ENST00000402550 MAJINQ3KP22 176 aa17.48■□□□□ 0.39
CGREF1-204ENST00000402550 C2orf82Q6UX34 121 aa17.48■□□□□ 0.39
CGREF1-204ENST00000402550 CARD19Q96LW7 228 aa17.48■□□□□ 0.39
CGREF1-204ENST00000402550 ANKRD39Q53RE8 183 aa17.47■□□□□ 0.39
CGREF1-204ENST00000402550 VAMP8Q9BV40 100 aa17.47■□□□□ 0.39
CGREF1-204ENST00000402550 NMUP48645 174 aa17.46■□□□□ 0.39
CGREF1-204ENST00000402550 SLPIP03973 132 aa17.45■□□□□ 0.38
CGREF1-204ENST00000402550 CDPF1Q6NVV7 123 aa17.45■□□□□ 0.38
CGREF1-204ENST00000402550 UNQ6190/PRO20217Q6UXQ8 127 aa17.45■□□□□ 0.38
CGREF1-204ENST00000402550 Q6ZRU5 148 aa17.45■□□□□ 0.38
CGREF1-204ENST00000402550 NDUFA12Q9UI09 145 aa17.45■□□□□ 0.38
CGREF1-204ENST00000402550 IGLV5-52A0A0A0MRZ9 124 aa17.44■□□□□ 0.38
CGREF1-204ENST00000402550 TSPEAR-AS2P59090 65 aa17.44■□□□□ 0.38
CGREF1-204ENST00000402550 IGKV2D-26A0A0A0MRZ7 120 aa17.43■□□□□ 0.38
CGREF1-204ENST00000402550 TRBV30A0A0K0K1B3 111 aa17.42■□□□□ 0.38
CGREF1-204ENST00000402550 MYMXA0A1B0GTQ4 84 aa17.42■□□□□ 0.38
CGREF1-204ENST00000402550 PAM16Q9Y3D7 125 aa17.42■□□□□ 0.38
CGREF1-204ENST00000402550 C10orf25Q5T742 122 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 ZNF625Q96I27 306 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-204ENST00000402550 DNAH5Q8TE73 4624 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 C16orf90A8MZG2 172 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 SMIM6P0DI80 62 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 HERV-K104P63124 156 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 S100A12P80511 92 aa17.4■□□□□ 0.38
CGREF1-204ENST00000402550 RNF151Q2KHN1 245 aa17.39■□□□□ 0.37
CGREF1-204ENST00000402550 SPATA45Q537H7 98 aa17.39■□□□□ 0.37
CGREF1-204ENST00000402550 C6orf48Q9UBA6 75 aa17.39■□□□□ 0.37
CGREF1-204ENST00000402550 C9orf163Q8N9P6 203 aa17.37■□□□□ 0.37
CGREF1-204ENST00000402550 ZNF815PA8K554 130 aa17.36■□□□□ 0.37
CGREF1-204ENST00000402550 PKIGQ9Y2B9 76 aa17.36■□□□□ 0.37
CGREF1-204ENST00000402550 GCSHP23434 173 aa17.34■□□□□ 0.37
CGREF1-204ENST00000402550 DYNC1H1Q14204 4646 aaKnown RBP17.33■□□□□ 0.37
CGREF1-204ENST00000402550 LINC00587B1AMM8 73 aa17.33■□□□□ 0.37
CGREF1-204ENST00000402550 MEIG1Q5JSS6 88 aa17.33■□□□□ 0.37
CGREF1-204ENST00000402550 PCP2Q8IVA1 136 aa17.33■□□□□ 0.37
CGREF1-204ENST00000402550 TTTY13Q9BZ97 58 aa17.33■□□□□ 0.37
CGREF1-204ENST00000402550 LINC01620Q4KN68 170 aa17.32■□□□□ 0.36
CGREF1-204ENST00000402550 C9orf116Q5BN46 136 aaPredicted RBP17.32■□□□□ 0.36
CGREF1-204ENST00000402550 ERG28Q9UKR5 140 aa17.32■□□□□ 0.36
CGREF1-204ENST00000402550 LOC107984640A0A0U1RRK4 108 aa17.3■□□□□ 0.36
CGREF1-204ENST00000402550 COX17Q14061 63 aa17.3■□□□□ 0.36
CGREF1-204ENST00000402550 PFN2P35080 140 aa17.29■□□□□ 0.36
CGREF1-204ENST00000402550 KRTAP10-1P60331 282 aa17.29■□□□□ 0.36
CGREF1-204ENST00000402550 SCGB1D4Q6XE38 83 aa17.29■□□□□ 0.36
CGREF1-204ENST00000402550 LRP1BQ9NZR2 4599 aa17.29■□□□□ 0.36
CGREF1-204ENST00000402550 NDUFC2-KCTD14E9PQ53 114 aa17.28■□□□□ 0.36
CGREF1-204ENST00000402550 COX8AP10176 69 aa17.28■□□□□ 0.36
CGREF1-204ENST00000402550 CIRBPQ14011 172 aaKnown RBP17.28■□□□□ 0.36
CGREF1-204ENST00000402550 TLX1NBP0CAT3 122 aa17.28■□□□□ 0.36
CGREF1-204ENST00000402550 RPL18AQ02543 176 aaKnown RBP17.28■□□□□ 0.36
CGREF1-204ENST00000402550 A0A0J9YXY3 114 aa17.27■□□□□ 0.35
CGREF1-204ENST00000402550 LINC00158P58513 81 aa17.26■□□□□ 0.35
CGREF1-204ENST00000402550 C14orf144Q96I85 54 aa17.26■□□□□ 0.35
CGREF1-204ENST00000402550 SDIM1Q6ZPB5 146 aa17.24■□□□□ 0.35
CGREF1-204ENST00000402550 BOD1L2Q8IYS8 172 aa17.24■□□□□ 0.35
CGREF1-204ENST00000402550 A0A0U1RRA0 63 aa17.23■□□□□ 0.35
CGREF1-204ENST00000402550 SMIM13P0DJ93 91 aa17.23■□□□□ 0.35
CGREF1-204ENST00000402550 BIRC6Q9NR09 4857 aa17.23■□□□□ 0.35
CGREF1-204ENST00000402550 DLEU1O43261 78 aa17.22■□□□□ 0.35
CGREF1-204ENST00000402550 GAGE2BQ13066 116 aa17.22■□□□□ 0.35
CGREF1-204ENST00000402550 SLC25A34Q6PIV7 304 aa17.22■□□□□ 0.35
CGREF1-204ENST00000402550 Q6ZRP5 223 aa17.22■□□□□ 0.35
CGREF1-204ENST00000402550 C12orf57Q99622 126 aa17.22■□□□□ 0.35
CGREF1-204ENST00000402550 GAGE2EQ4V326 116 aa17.21■□□□□ 0.35
CGREF1-204ENST00000402550 GAGE2DQ9UEU5 116 aa17.21■□□□□ 0.35
CGREF1-204ENST00000402550 TIMM17BO60830 172 aa17.19■□□□□ 0.34
CGREF1-204ENST00000402550 LINC00474Q9P2X8 69 aa17.19■□□□□ 0.34
CGREF1-204ENST00000402550 IGKV2-24A0A0C4DH68 120 aa17.19■□□□□ 0.34
CGREF1-204ENST00000402550 PTTG1IPP53801 180 aa17.19■□□□□ 0.34
CGREF1-204ENST00000402550 TMEM238C9JI98 176 aa17.18■□□□□ 0.34
CGREF1-204ENST00000402550 A0A096LNI7 61 aa17.17■□□□□ 0.34
CGREF1-204ENST00000402550 MIR7-3HGQ8N6C7 128 aa17.17■□□□□ 0.34
CGREF1-204ENST00000402550 FAM30AQ9NZY2 134 aa17.17■□□□□ 0.34
CGREF1-204ENST00000402550 TP73-AS1Q9UF72 201 aa17.15■□□□□ 0.34
CGREF1-204ENST00000402550 Q6ZSA8 131 aa17.14■□□□□ 0.33
CGREF1-204ENST00000402550 DAND5Q8N907 189 aa17.14■□□□□ 0.33
CGREF1-204ENST00000402550 SND1-IT1Q9HBX3 110 aa17.14■□□□□ 0.33
CGREF1-204ENST00000402550 XAGE1AQ9HD64 81 aa17.14■□□□□ 0.33
CGREF1-204ENST00000402550 LINC00518Q8N0U6 118 aa17.13■□□□□ 0.33
CGREF1-204ENST00000402550 DPH3Q96FX2 82 aa17.13■□□□□ 0.33
CGREF1-204ENST00000402550 UQCR10Q9UDW1 63 aa17.13■□□□□ 0.33
CGREF1-204ENST00000402550 CHTF8P0CG12 524 aa17.12■□□□□ 0.33
CGREF1-204ENST00000402550 ADAMTSL4-AS1Q5T5F5 129 aa17.12■□□□□ 0.33
CGREF1-204ENST00000402550 LITAFQ99732 161 aa17.12■□□□□ 0.33
CGREF1-204ENST00000402550 MIEN1Q9BRT3 115 aa17.12■□□□□ 0.33
CGREF1-204ENST00000402550 KIAA1109Q2LD37 5005 aa17.11■□□□□ 0.33
CGREF1-204ENST00000402550 DNAH8Q96JB1 4490 aa17.1■□□□□ 0.33
CGREF1-204ENST00000402550 CDK2AP2O75956 126 aa17.1■□□□□ 0.33
CGREF1-204ENST00000402550 Q6ZVH6 145 aa17.1■□□□□ 0.33
CGREF1-204ENST00000402550 XGP55808 180 aa17.09■□□□□ 0.33
CGREF1-204ENST00000402550 SRSF9Q13242 221 aaKnown RBP eCLIP17.09■□□□□ 0.33
CGREF1-204ENST00000402550 SPACA4Q8TDM5 124 aa17.09■□□□□ 0.33
CGREF1-204ENST00000402550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms