RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
FAM49B-201ENST00000401979 LECT2O14960 151 aa10.35□□□□□ -0.75
FAM49B-201ENST00000401979 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
FAM49B-201ENST00000401979 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
FAM49B-201ENST00000401979 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
FAM49B-201ENST00000401979 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
FAM49B-201ENST00000401979 HIST1H4GQ99525 98 aa10.34□□□□□ -0.75
FAM49B-201ENST00000401979 Q6ZR54 194 aa10.33□□□□□ -0.76
FAM49B-201ENST00000401979 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
FAM49B-201ENST00000401979 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
FAM49B-201ENST00000401979 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
FAM49B-201ENST00000401979 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
FAM49B-201ENST00000401979 KMT2AQ03164 3969 aa10.31□□□□□ -0.76
FAM49B-201ENST00000401979 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
FAM49B-201ENST00000401979 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
FAM49B-201ENST00000401979 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
FAM49B-201ENST00000401979 PFN2P35080 140 aa10.3□□□□□ -0.76
FAM49B-201ENST00000401979 HSD52Q0P140 79 aa10.3□□□□□ -0.76
FAM49B-201ENST00000401979 ALMS1Q8TCU4 4167 aa10.3□□□□□ -0.76
FAM49B-201ENST00000401979 LINC00158P58513 81 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 C2orf48Q96LS8 159 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 TIMM17BO60830 172 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
FAM49B-201ENST00000401979 C10orf25Q5T742 122 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 DAND5Q8N907 189 aa10.29□□□□□ -0.76
FAM49B-201ENST00000401979 SPANXB1Q9NS25 103 aaPredicted RBP10.29□□□□□ -0.76
FAM49B-201ENST00000401979 GCSHP23434 173 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 BATFQ16520 125 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 Q6ZRN7 208 aaPredicted RBP10.28□□□□□ -0.76
FAM49B-201ENST00000401979 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 TAL2Q16559 108 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
FAM49B-201ENST00000401979 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 LITAFQ99732 161 aa10.28□□□□□ -0.76
FAM49B-201ENST00000401979 F8WDY8 70 aa10.27□□□□□ -0.77
FAM49B-201ENST00000401979 M0R143 59 aa10.27□□□□□ -0.77
FAM49B-201ENST00000401979 WFDC2Q14508 124 aa10.27□□□□□ -0.77
FAM49B-201ENST00000401979 Q6ZRU5 148 aa10.27□□□□□ -0.77
FAM49B-201ENST00000401979 NPC2P61916 151 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 Q6ZVH6 145 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 CEND1Q8N111 149 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
FAM49B-201ENST00000401979 COX17Q14061 63 aa10.25□□□□□ -0.77
FAM49B-201ENST00000401979 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
FAM49B-201ENST00000401979 DNAH10Q8IVF4 4471 aa10.25□□□□□ -0.77
FAM49B-201ENST00000401979 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
FAM49B-201ENST00000401979 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
FAM49B-201ENST00000401979 BVES-AS1Q5T3Y7 98 aa10.23□□□□□ -0.77
FAM49B-201ENST00000401979 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
FAM49B-201ENST00000401979 COPS9Q8WXC6 57 aa10.23□□□□□ -0.77
FAM49B-201ENST00000401979 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.23□□□□□ -0.77
FAM49B-201ENST00000401979 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.22□□□□□ -0.77
FAM49B-201ENST00000401979 IFITM1P13164 125 aa10.22□□□□□ -0.77
FAM49B-201ENST00000401979 LCE6AA0A183 80 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 TMEM238LA0A1B0GVL6 79 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 A6NJY4 79 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 FXYD2P54710 66 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
FAM49B-201ENST00000401979 SNHG12Q9BXW3 62 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.77
FAM49B-201ENST00000401979 SLPIP03973 132 aa10.21□□□□□ -0.78
FAM49B-201ENST00000401979 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.78
FAM49B-201ENST00000401979 A0A087WTM6 91 aa10.19□□□□□ -0.78
FAM49B-201ENST00000401979 A6NDN8 102 aa10.19□□□□□ -0.78
FAM49B-201ENST00000401979 EREGO14944 169 aa10.19□□□□□ -0.78
FAM49B-201ENST00000401979 NDUFC2-KCTD14E9PQ53 114 aa10.18□□□□□ -0.78
FAM49B-201ENST00000401979 RNF151Q2KHN1 245 aa10.18□□□□□ -0.78
FAM49B-201ENST00000401979 Q8N814 137 aa10.18□□□□□ -0.78
FAM49B-201ENST00000401979 A4D1N5 150 aa10.17□□□□□ -0.78
FAM49B-201ENST00000401979 CNBPP62633 177 aaKnown RBP10.17□□□□□ -0.78
FAM49B-201ENST00000401979 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
FAM49B-201ENST00000401979 EIF4EBP3O60516 100 aaPredicted RBP10.17□□□□□ -0.78
FAM49B-201ENST00000401979 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
FAM49B-201ENST00000401979 SND1-IT1Q9HBX3 110 aa10.17□□□□□ -0.78
FAM49B-201ENST00000401979 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
FAM49B-201ENST00000401979 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
FAM49B-201ENST00000401979 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
FAM49B-201ENST00000401979 Q6ZRP5 223 aa10.14□□□□□ -0.79
FAM49B-201ENST00000401979 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
FAM49B-201ENST00000401979 DNAH2Q9P225 4427 aa10.14□□□□□ -0.79
FAM49B-201ENST00000401979 RTL8CO15255 209 aa10.14□□□□□ -0.79
FAM49B-201ENST00000401979 COL5A1-AS1Q5SY13 56 aa10.14□□□□□ -0.79
FAM49B-201ENST00000401979 LOC107984640A0A0U1RRK4 108 aa10.13□□□□□ -0.79
FAM49B-201ENST00000401979 TNP2Q05952 138 aa10.13□□□□□ -0.79
FAM49B-201ENST00000401979 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
FAM49B-201ENST00000401979 K7ERJ3 54 aa10.12□□□□□ -0.79
FAM49B-201ENST00000401979 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
FAM49B-201ENST00000401979 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
FAM49B-201ENST00000401979 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
FAM49B-201ENST00000401979 HYDINQ4G0P3 5121 aa10.11□□□□□ -0.79
FAM49B-201ENST00000401979 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
FAM49B-201ENST00000401979 CFC1P0CG37 223 aa10.11□□□□□ -0.79
FAM49B-201ENST00000401979 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 272 ms