RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 STAB2Q8WWQ8 2551 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 NPC2P61916 151 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 EIF4EBP3O60516 100 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-205ENST00000401607 CFC1BP0CG36 223 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 CFC1P0CG37 223 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 SFTA2Q6UW10 78 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 UPK3BQ9BT76 320 aa17.2■□□□□ 0.34
CPNE1-205ENST00000401607 H3BUT2 72 aa17.19■□□□□ 0.34
CPNE1-205ENST00000401607 APOMO95445 188 aa17.19■□□□□ 0.34
CPNE1-205ENST00000401607 IFITM1P13164 125 aa17.18■□□□□ 0.34
CPNE1-205ENST00000401607 C2orf82Q6UX34 121 aa17.18■□□□□ 0.34
CPNE1-205ENST00000401607 APLNQ9ULZ1 77 aa17.18■□□□□ 0.34
CPNE1-205ENST00000401607 KLK5Q9Y337 293 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-205ENST00000401607 LINC00308Q8TCZ7 52 aa17.16■□□□□ 0.34
CPNE1-205ENST00000401607 CFAP161Q6P656 301 aa17.15■□□□□ 0.34
CPNE1-205ENST00000401607 IBA57-AS1B1ANH7 110 aa17.15■□□□□ 0.34
CPNE1-205ENST00000401607 SOSTDC1Q6X4U4 206 aa17.15■□□□□ 0.34
CPNE1-205ENST00000401607 MEGF8Q7Z7M0 2845 aa17.14■□□□□ 0.33
CPNE1-205ENST00000401607 CXCL5P42830 114 aa17.14■□□□□ 0.33
CPNE1-205ENST00000401607 CKS1BP61024 79 aa17.13■□□□□ 0.33
CPNE1-205ENST00000401607 SPAG11BQ08648 103 aa17.13■□□□□ 0.33
CPNE1-205ENST00000401607 C1orf43Q9BWL3 253 aa17.13■□□□□ 0.33
CPNE1-205ENST00000401607 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-205ENST00000401607 VAMP3Q15836 100 aa17.12■□□□□ 0.33
CPNE1-205ENST00000401607 ERG28Q9UKR5 140 aa17.12■□□□□ 0.33
CPNE1-205ENST00000401607 A0A0B4J2C4 111 aa17.12■□□□□ 0.33
CPNE1-205ENST00000401607 MIR7-3HGQ8N6C7 128 aa17.11■□□□□ 0.33
CPNE1-205ENST00000401607 A0A1W2PPM0 123 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 LINC00158P58513 81 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 PGPEP1Q9NXJ5 209 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 DNAH1Q9P2D7 4330 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 IGKV2D-24A0A075B6R9 120 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 NUPR2A6NF83 97 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 C6orf223Q8N319 242 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 Q9HAA7 133 aa17.1■□□□□ 0.33
CPNE1-205ENST00000401607 PFN2P35080 140 aa17.09■□□□□ 0.33
CPNE1-205ENST00000401607 LINC00526Q96FQ7 95 aa17.09■□□□□ 0.33
CPNE1-205ENST00000401607 PRO1854Q9UHT4 67 aa17.09■□□□□ 0.33
CPNE1-205ENST00000401607 TSPAN13O95857 204 aa17.08■□□□□ 0.33
CPNE1-205ENST00000401607 PPDPFQ9H3Y8 114 aa17.07■□□□□ 0.32
CPNE1-205ENST00000401607 COPS9Q8WXC6 57 aa17.07■□□□□ 0.32
CPNE1-205ENST00000401607 C10orf25Q5T742 122 aa17.05■□□□□ 0.32
CPNE1-205ENST00000401607 C15orf56Q8N910 161 aa17.05■□□□□ 0.32
CPNE1-205ENST00000401607 UBE2V1Q13404 147 aa17.04■□□□□ 0.32
CPNE1-205ENST00000401607 UNQ6190/PRO20217Q6UXQ8 127 aa17.04■□□□□ 0.32
CPNE1-205ENST00000401607 NTN5Q8WTR8 489 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-205ENST00000401607 FABP2P12104 132 aa17.03■□□□□ 0.32
CPNE1-205ENST00000401607 UBE2DNLQ8IWF7 75 aa17.02■□□□□ 0.32
CPNE1-205ENST00000401607 HIGD2BQ4VC39 106 aa17.02■□□□□ 0.31
CPNE1-205ENST00000401607 C9orf116Q5BN46 136 aaPredicted RBP17.02■□□□□ 0.31
CPNE1-205ENST00000401607 DNAH7Q8WXX0 4024 aa17.01■□□□□ 0.31
CPNE1-205ENST00000401607 PLECQ15149 4684 aaKnown RBP17.01■□□□□ 0.31
CPNE1-205ENST00000401607 COX17Q14061 63 aa17■□□□□ 0.31
CPNE1-205ENST00000401607 CSMD3Q7Z407 3707 aa17■□□□□ 0.31
CPNE1-205ENST00000401607 K7EP34 96 aa17■□□□□ 0.31
CPNE1-205ENST00000401607 SPCS1Q9Y6A9 102 aa17■□□□□ 0.31
CPNE1-205ENST00000401607 GAGE10A6NGK3 116 aa16.98■□□□□ 0.31
CPNE1-205ENST00000401607 KRTAP1-5Q9BYS1 174 aa16.98■□□□□ 0.31
CPNE1-205ENST00000401607 ZNF561-AS1K7EIQ3 104 aa16.97■□□□□ 0.31
CPNE1-205ENST00000401607 GVQW2A0A096LPI5 108 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-205ENST00000401607 H7C2G1 150 aa16.96■□□□□ 0.31
CPNE1-205ENST00000401607 SND1-IT1Q9HBX3 110 aa16.96■□□□□ 0.31
CPNE1-205ENST00000401607 C6orf48Q9UBA6 75 aa16.96■□□□□ 0.31
CPNE1-205ENST00000401607 CASC10Q5T4H9 136 aa16.95■□□□□ 0.3
CPNE1-205ENST00000401607 RMI2Q96E14 147 aa16.95■□□□□ 0.3
CPNE1-205ENST00000401607 GTF2H5Q6ZYL4 71 aa16.94■□□□□ 0.3
CPNE1-205ENST00000401607 STARD9Q9P2P6 4700 aa16.94■□□□□ 0.3
CPNE1-205ENST00000401607 LYSTQ99698 3801 aa16.94■□□□□ 0.3
CPNE1-205ENST00000401607 LOC107984156A0A0G2JMH3 177 aa16.93■□□□□ 0.3
CPNE1-205ENST00000401607 ARL17AQ8IVW1 177 aa16.93■□□□□ 0.3
CPNE1-205ENST00000401607 C2orf48Q96LS8 159 aa16.93■□□□□ 0.3
CPNE1-205ENST00000401607 CAMK2N2Q96S95 79 aa16.93■□□□□ 0.3
CPNE1-205ENST00000401607 RPL13AP40429 203 aaKnown RBP16.92■□□□□ 0.3
CPNE1-205ENST00000401607 IGKV2-28A0A075B6P5 120 aa16.91■□□□□ 0.3
CPNE1-205ENST00000401607 IGKV2D-28P01615 120 aa16.91■□□□□ 0.3
CPNE1-205ENST00000401607 Q1RN00 199 aa16.91■□□□□ 0.3
CPNE1-205ENST00000401607 Q6ZRU5 148 aa16.9■□□□□ 0.3
CPNE1-205ENST00000401607 TRBV30A0A0K0K1B3 111 aa16.89■□□□□ 0.3
CPNE1-205ENST00000401607 MUC7Q8TAX7 377 aa16.88■□□□□ 0.29
CPNE1-205ENST00000401607 PSMB2P49721 201 aa16.87■□□□□ 0.29
CPNE1-205ENST00000401607 USP17L23D6RBM5 183 aa16.87■□□□□ 0.29
CPNE1-205ENST00000401607 F8WDY8 70 aa16.87■□□□□ 0.29
CPNE1-205ENST00000401607 LINC00337Q8N6G1 96 aa16.87■□□□□ 0.29
CPNE1-205ENST00000401607 TRIAP1O43715 76 aa16.85■□□□□ 0.29
CPNE1-205ENST00000401607 FBN3Q75N90 2809 aa16.85■□□□□ 0.29
CPNE1-205ENST00000401607 LYRM7Q5U5X0 104 aa16.84■□□□□ 0.29
CPNE1-205ENST00000401607 TRAV13-2A0A0B4J235 113 aa16.84■□□□□ 0.29
CPNE1-205ENST00000401607 VPS13DQ5THJ4 4388 aa16.83■□□□□ 0.28
CPNE1-205ENST00000401607 SCGB1C2P0DMR2 95 aa16.82■□□□□ 0.28
CPNE1-205ENST00000401607 SYCNQ0VAF6 134 aa16.82■□□□□ 0.28
CPNE1-205ENST00000401607 Q8NDZ9 215 aa16.82■□□□□ 0.28
CPNE1-205ENST00000401607 H3BMG7 143 aa16.81■□□□□ 0.28
CPNE1-205ENST00000401607 NDUFC2O95298 119 aa16.81■□□□□ 0.28
CPNE1-205ENST00000401607 TCL1BO95988 128 aa16.81■□□□□ 0.28
CPNE1-205ENST00000401607 NBDYA0A0U1RRE5 68 aa16.8■□□□□ 0.28
CPNE1-205ENST00000401607 LECT2O14960 151 aa16.79■□□□□ 0.28
CPNE1-205ENST00000401607 SLPIP03973 132 aa16.79■□□□□ 0.28
CPNE1-205ENST00000401607 TTC32Q5I0X7 151 aa16.78■□□□□ 0.28
CPNE1-205ENST00000401607 PRR3P79522 188 aaKnown RBP16.77■□□□□ 0.28
CPNE1-205ENST00000401607 TRBV20-1A0A075B6N2 111 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms