RNA–Protein interactions for RNA: ENST00000400866.4

ATRX-203, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-203ENST00000400866 K7EQZ3 153 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 DLEU1O43261 78 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 SSSCA1O60232 199 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 AKAIN1P0CW23 69 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 C8orf59Q8N0T1 100 aaPredicted RBP-0.37□□□□□ -2.47
ATRX-203ENST00000400866 SHANK2Q9UPX8 1470 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 DIP2CQ9Y2E4 1556 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 DNAJC13O75165 2243 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 TOPAZ1Q8N9V7 1692 aa-0.37□□□□□ -2.47
ATRX-203ENST00000400866 SCAPERQ9BY12 1400 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 TOP2BQ02880 1626 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 XRN1Q8IZH2 1706 aaKnown RBP-0.38□□□□□ -2.47
ATRX-203ENST00000400866 FXYD6-FXYD2A0A087WZ82 144 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 LINC00587B1AMM8 73 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 TPPP2P59282 170 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 UBE2D3P61077 147 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 UBE2D2P62837 147 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 C9orf153Q5TBE3 101 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 FAM223AQ8IWN6 122 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 TMEM263Q8WUH6 116 aaKnown RBP-0.38□□□□□ -2.47
ATRX-203ENST00000400866 C1orf54Q8WWF1 131 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 FAM167A-AS1Q96KT0 104 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 TSC22D3Q99576 134 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 NXT2Q9NPJ8 142 aaKnown RBP-0.38□□□□□ -2.47
ATRX-203ENST00000400866 GAPVD1Q14C86 1478 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 C1orf167Q5SNV9 1468 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 MRC2Q9UBG0 1479 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 ITPR3Q14573 2671 aa-0.38□□□□□ -2.47
ATRX-203ENST00000400866 ANKRD11Q6UB99 2663 aaPredicted RBP-0.38□□□□□ -2.47
ATRX-203ENST00000400866 NRKQ7Z2Y5 1582 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 PZPP20742 1482 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 WDR7Q9Y4E6 1490 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 UBE2L5PA0A1B0GUS4 154 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 APOC3P02656 99 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 COX6B1P14854 86 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 UBE2L3P68036 154 aaKnown RBP-0.39□□□□□ -2.47
ATRX-203ENST00000400866 DCDP81605 110 aaKnown RBP-0.39□□□□□ -2.47
ATRX-203ENST00000400866 Q0VG73 95 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 KLK9Q2XQG4 91 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 RPL13AP3Q6NVV1 102 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 IER3IP1Q9Y5U9 82 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 ARL2-SNX15V9GYD0 113 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 CNOT1A5YKK6 2376 aaKnown RBP-0.39□□□□□ -2.47
ATRX-203ENST00000400866 BIRC6Q9NR09 4857 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 NAIPQ13075 1403 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 PCNX1Q96RV3 2341 aa-0.39□□□□□ -2.47
ATRX-203ENST00000400866 TNRC18O15417 2968 aaPredicted RBP-0.4□□□□□ -2.47
ATRX-203ENST00000400866 KTN1Q86UP2 1357 aaKnown RBP-0.4□□□□□ -2.47
ATRX-203ENST00000400866 LOC285095A0A1B0GVY8 99 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 IFNGP01579 166 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 PIGYQ3MUY2 71 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 SFTA2Q6UW10 78 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 LINC01600Q96MT4 127 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 ZZEF1O43149 2961 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 MYO9AB2RTY4 2548 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 APOBP04114 4563 aaKnown RBP-0.4□□□□□ -2.47
ATRX-203ENST00000400866 DNAH3Q8TD57 4116 aa-0.4□□□□□ -2.47
ATRX-203ENST00000400866 POLA1P09884 1462 aaPredicted RBP-0.41□□□□□ -2.47
ATRX-203ENST00000400866 PLEKHH2Q8IVE3 1493 aa-0.41□□□□□ -2.47
ATRX-203ENST00000400866 NLRP1Q9C000 1473 aa-0.41□□□□□ -2.47
ATRX-203ENST00000400866 SLIT1O75093 1534 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 ARHGAP5Q13017 1502 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 EFCAB10A6NFE3 127 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 FAM223BA6NKX1 122 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 CORTO00230 105 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 MGPP08493 103 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 S100A3P33764 101 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 GNG11P61952 73 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 C2orf88Q9BSF0 95 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 CRIPTQ9P021 101 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 SHPRHQ149N8 1683 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 A0A0G2JMZ2 1700 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 KNDC1Q76NI1 1749 aa-0.41□□□□□ -2.48
ATRX-203ENST00000400866 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
ATRX-203ENST00000400866 TARBP1Q13395 1621 aaKnown RBP-0.42□□□□□ -2.48
ATRX-203ENST00000400866 VPS13DQ5THJ4 4388 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 MTORP42345 2549 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 TRBV7-4A0A0J9YYF1 115 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 SNAPC5O75971 98 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 KRTAP19-8Q3LI54 63 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 HTTP42858 3142 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 ABCC5O15440 1437 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 KIAA1551Q9HCM1 1747 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 LAMA3Q16787 3333 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 PKD1L2Q7Z442 2459 aa-0.42□□□□□ -2.48
ATRX-203ENST00000400866 ZFYVE16Q7Z3T8 1539 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 TACC2O95359 2948 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 VPS13BQ7Z7G8 4022 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 FAM186AA6NE01 2351 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 F6UZH7 168 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 PPP3R1P63098 170 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 MANBALQ9NQG1 85 aa-0.43□□□□□ -2.48
ATRX-203ENST00000400866 ITPR2Q14571 2701 aa-0.44□□□□□ -2.48
ATRX-203ENST00000400866 LAMA1P25391 3075 aa-0.44□□□□□ -2.48
ATRX-203ENST00000400866 EIF4G3O43432 1585 aaKnown RBP-0.44□□□□□ -2.48
ATRX-203ENST00000400866 KALRNO60229 2985 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms