RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 Q6JHZ5 121 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 PDZD2O15018 2839 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 J3QLI3 93 aa12.14□□□□□ -0.47
PTPRA-205ENST00000399903 TMEM243Q9BU79 118 aa12.13□□□□□ -0.47
PTPRA-205ENST00000399903 CCL18P55774 89 aa12.11□□□□□ -0.47
PTPRA-205ENST00000399903 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
PTPRA-205ENST00000399903 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
PTPRA-205ENST00000399903 FSHBP01225 129 aa12.1□□□□□ -0.47
PTPRA-205ENST00000399903 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
PTPRA-205ENST00000399903 ORMDL1Q9P0S3 153 aa12.09□□□□□ -0.47
PTPRA-205ENST00000399903 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
PTPRA-205ENST00000399903 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
PTPRA-205ENST00000399903 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
PTPRA-205ENST00000399903 Q6ZTI0 123 aa12.08□□□□□ -0.48
PTPRA-205ENST00000399903 DYNLRB2Q8TF09 96 aa12.08□□□□□ -0.48
PTPRA-205ENST00000399903 H0YGX0 51 aa12.07□□□□□ -0.48
PTPRA-205ENST00000399903 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 PF4P02776 101 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 SMR3AQ99954 134 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 ESM1Q9NQ30 184 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 ANK3Q12955 4377 aaKnown RBP12.06□□□□□ -0.48
PTPRA-205ENST00000399903 INSP01308 110 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 Q5XG85 94 aa12.06□□□□□ -0.48
PTPRA-205ENST00000399903 NBEAL2Q6ZNJ1 2754 aa12.05□□□□□ -0.48
PTPRA-205ENST00000399903 OTOGQ6ZRI0 2925 aa12.05□□□□□ -0.48
PTPRA-205ENST00000399903 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
PTPRA-205ENST00000399903 SNURFQ9Y675 71 aa12.04□□□□□ -0.48
PTPRA-205ENST00000399903 C6orf226Q5I0X4 101 aa12.04□□□□□ -0.48
PTPRA-205ENST00000399903 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
PTPRA-205ENST00000399903 DNAJC9-AS1A6NH13 148 aa12.03□□□□□ -0.48
PTPRA-205ENST00000399903 HAMPP81172 84 aa12.03□□□□□ -0.48
PTPRA-205ENST00000399903 C1orf43Q9BWL3 253 aa12.03□□□□□ -0.48
PTPRA-205ENST00000399903 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
PTPRA-205ENST00000399903 K7EQD1 137 aa12.03□□□□□ -0.48
PTPRA-205ENST00000399903 TRGV2A0A075B6R0 118 aa12.03□□□□□ -0.48
PTPRA-205ENST00000399903 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
PTPRA-205ENST00000399903 FAM236DA0A1B0GTK5 79 aa12.02□□□□□ -0.49
PTPRA-205ENST00000399903 FAM236CP0DP71 79 aa12.02□□□□□ -0.49
PTPRA-205ENST00000399903 TMEM89A2RUT3 159 aa12.01□□□□□ -0.49
PTPRA-205ENST00000399903 CCKP06307 115 aa12.01□□□□□ -0.49
PTPRA-205ENST00000399903 PKIGQ9Y2B9 76 aa12.01□□□□□ -0.49
PTPRA-205ENST00000399903 UBL5Q9BZL1 73 aa12.01□□□□□ -0.49
PTPRA-205ENST00000399903 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
PTPRA-205ENST00000399903 VWFP04275 2813 aa12□□□□□ -0.49
PTPRA-205ENST00000399903 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
PTPRA-205ENST00000399903 XCL1P47992 114 aa11.99□□□□□ -0.49
PTPRA-205ENST00000399903 STHQ8IWL8 128 aa11.99□□□□□ -0.49
PTPRA-205ENST00000399903 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
PTPRA-205ENST00000399903 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
PTPRA-205ENST00000399903 PLA2G2AP14555 144 aa11.97□□□□□ -0.49
PTPRA-205ENST00000399903 LAMTOR3Q9UHA4 124 aa11.97□□□□□ -0.49
PTPRA-205ENST00000399903 WIPF1O43516 503 aa11.96□□□□□ -0.49
PTPRA-205ENST00000399903 ATRQ13535 2644 aa11.96□□□□□ -0.49
PTPRA-205ENST00000399903 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.5
PTPRA-205ENST00000399903 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 NDUFC2O95298 119 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 SS18Q15532 418 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 TMEM86BQ8N661 226 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 A8MTW9 85 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 WFDC10AQ9H1F0 79 aa11.95□□□□□ -0.5
PTPRA-205ENST00000399903 RMI2Q96E14 147 aa11.94□□□□□ -0.5
PTPRA-205ENST00000399903 J3QKU1 62 aa11.94□□□□□ -0.5
PTPRA-205ENST00000399903 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
PTPRA-205ENST00000399903 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
PTPRA-205ENST00000399903 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
PTPRA-205ENST00000399903 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
PTPRA-205ENST00000399903 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 A0A096LPF7 62 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 RBM3P98179 157 aaKnown RBP11.92□□□□□ -0.5
PTPRA-205ENST00000399903 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 IBA57-AS1B1ANH7 110 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 KRTAP1-1Q07627 177 aa11.92□□□□□ -0.5
PTPRA-205ENST00000399903 A0A0U1RQV1 116 aa11.91□□□□□ -0.5
PTPRA-205ENST00000399903 CCL24O00175 119 aa11.91□□□□□ -0.5
PTPRA-205ENST00000399903 Q8N814 137 aa11.91□□□□□ -0.5
PTPRA-205ENST00000399903 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
PTPRA-205ENST00000399903 TRAV10A0A0B4J240 114 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 F8WEM9 126 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 TMEM256-PLSCR3K7ERE1 68 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 C6orf99Q4VX62 202 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 M0R2N4 97 aa11.89□□□□□ -0.51
PTPRA-205ENST00000399903 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
PTPRA-205ENST00000399903 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
PTPRA-205ENST00000399903 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
PTPRA-205ENST00000399903 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
PTPRA-205ENST00000399903 TRRAPQ9Y4A5 3859 aa11.87□□□□□ -0.51
PTPRA-205ENST00000399903 TEP1Q99973 2627 aaKnown RBP11.87□□□□□ -0.51
PTPRA-205ENST00000399903 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
PTPRA-205ENST00000399903 H7BZZ5 65 aa11.86□□□□□ -0.51
PTPRA-205ENST00000399903 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
PTPRA-205ENST00000399903 BRK1Q8WUW1 75 aa11.86□□□□□ -0.51
PTPRA-205ENST00000399903 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
PTPRA-205ENST00000399903 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms