RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SERP1Q9Y6X1 66 aa11.29□□□□□ -0.6
CHMP1A-201ENST00000397901 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
CHMP1A-201ENST00000397901 ATP5EP2Q5VTU8 51 aa11.28□□□□□ -0.6
CHMP1A-201ENST00000397901 FAM19A3Q7Z5A8 133 aa11.28□□□□□ -0.6
CHMP1A-201ENST00000397901 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 TMEM86BQ8N661 226 aa11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 PDZD2O15018 2839 aa11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 TRBV10-1A0A0K0K1A3 114 aa11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 UBE2L6O14933 153 aa11.27□□□□□ -0.61
CHMP1A-201ENST00000397901 NF1P21359 2839 aa11.26□□□□□ -0.61
CHMP1A-201ENST00000397901 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
CHMP1A-201ENST00000397901 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
CHMP1A-201ENST00000397901 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
CHMP1A-201ENST00000397901 LINC00337Q8N6G1 96 aa11.26□□□□□ -0.61
CHMP1A-201ENST00000397901 LOC100131303A0A0U1RQF7 123 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 NCR3O14931 201 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 HILS1P60008 231 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 CCKP06307 115 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 C20orf197Q8N268 126 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
CHMP1A-201ENST00000397901 XCL1P47992 114 aa11.24□□□□□ -0.61
CHMP1A-201ENST00000397901 TRAV23DV6A0A075B6W5 121 aa11.24□□□□□ -0.61
CHMP1A-201ENST00000397901 F8WDY8 70 aa11.24□□□□□ -0.61
CHMP1A-201ENST00000397901 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 C1orf43Q9BWL3 253 aa11.23□□□□□ -0.61
CHMP1A-201ENST00000397901 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
CHMP1A-201ENST00000397901 DNAJC9-AS1A6NH13 148 aa11.22□□□□□ -0.61
CHMP1A-201ENST00000397901 LECT2O14960 151 aa11.22□□□□□ -0.61
CHMP1A-201ENST00000397901 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CHMP1A-201ENST00000397901 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
CHMP1A-201ENST00000397901 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
CHMP1A-201ENST00000397901 WFDC10AQ9H1F0 79 aa11.21□□□□□ -0.61
CHMP1A-201ENST00000397901 KRTAP1-1Q07627 177 aa11.2□□□□□ -0.62
CHMP1A-201ENST00000397901 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
CHMP1A-201ENST00000397901 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
CHMP1A-201ENST00000397901 PLA2G2AP14555 144 aa11.2□□□□□ -0.62
CHMP1A-201ENST00000397901 ESM1Q9NQ30 184 aa11.2□□□□□ -0.62
CHMP1A-201ENST00000397901 CCL24O00175 119 aa11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 LYPD5Q6UWN5 251 aa11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 ORMDL1Q9P0S3 153 aa11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 H7BZZ5 65 aa11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
CHMP1A-201ENST00000397901 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
CHMP1A-201ENST00000397901 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
CHMP1A-201ENST00000397901 BCE1O60756 84 aa11.18□□□□□ -0.62
CHMP1A-201ENST00000397901 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
CHMP1A-201ENST00000397901 LINC00158P58513 81 aa11.18□□□□□ -0.62
CHMP1A-201ENST00000397901 HELZ2Q9BYK8 2649 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-201ENST00000397901 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
CHMP1A-201ENST00000397901 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
CHMP1A-201ENST00000397901 SMIM26A0A096LP01 95 aa11.17□□□□□ -0.62
CHMP1A-201ENST00000397901 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
CHMP1A-201ENST00000397901 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 J3QKU1 62 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 SLPIP03973 132 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 SS18Q15532 418 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
CHMP1A-201ENST00000397901 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
CHMP1A-201ENST00000397901 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
CHMP1A-201ENST00000397901 CCL18P55774 89 aa11.14□□□□□ -0.63
CHMP1A-201ENST00000397901 C11orf68Q9H3H3 251 aaKnown RBP11.14□□□□□ -0.63
CHMP1A-201ENST00000397901 UBL5Q9BZL1 73 aa11.13□□□□□ -0.63
CHMP1A-201ENST00000397901 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
CHMP1A-201ENST00000397901 TRBV6-4A0A1B0GX49 114 aa11.13□□□□□ -0.63
CHMP1A-201ENST00000397901 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
CHMP1A-201ENST00000397901 UNC79Q9P2D8 2635 aa11.12□□□□□ -0.63
CHMP1A-201ENST00000397901 ACANP16112 2415 aa11.12□□□□□ -0.63
CHMP1A-201ENST00000397901 FP248Q71RG6 208 aaPredicted RBP11.12□□□□□ -0.63
CHMP1A-201ENST00000397901 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
CHMP1A-201ENST00000397901 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
CHMP1A-201ENST00000397901 IGHV3OR16-9A0A0B4J2B5 98 aa11.11□□□□□ -0.63
CHMP1A-201ENST00000397901 LINC00167Q96N53 147 aa11.11□□□□□ -0.63
CHMP1A-201ENST00000397901 PAX4O43316 350 aa11.1□□□□□ -0.63
CHMP1A-201ENST00000397901 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
CHMP1A-201ENST00000397901 LINC01006Q8NI28 216 aa11.09□□□□□ -0.63
CHMP1A-201ENST00000397901 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
CHMP1A-201ENST00000397901 A0A087WZ39 114 aa11.08□□□□□ -0.64
CHMP1A-201ENST00000397901 IBA57-AS1B1ANH7 110 aa11.08□□□□□ -0.64
CHMP1A-201ENST00000397901 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.64
CHMP1A-201ENST00000397901 LY6G6DO95868 133 aa11.08□□□□□ -0.64
CHMP1A-201ENST00000397901 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
CHMP1A-201ENST00000397901 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
CHMP1A-201ENST00000397901 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
CHMP1A-201ENST00000397901 C19orf73Q9NVV2 129 aa11.07□□□□□ -0.64
CHMP1A-201ENST00000397901 MTORP42345 2549 aa11.06□□□□□ -0.64
CHMP1A-201ENST00000397901 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
CHMP1A-201ENST00000397901 LINC00959A0A1B0GUT2 108 aa11.05□□□□□ -0.64
CHMP1A-201ENST00000397901 F8WEM9 126 aa11.05□□□□□ -0.64
CHMP1A-201ENST00000397901 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
CHMP1A-201ENST00000397901 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
CHMP1A-201ENST00000397901 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
CHMP1A-201ENST00000397901 NDUFC1O43677 76 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms