RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 Q6ZR54 194 aa12.88□□□□□ -0.35
PDLIM2-205ENST00000397761 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-205ENST00000397761 RYR2Q92736 4967 aa12.86□□□□□ -0.35
PDLIM2-205ENST00000397761 TMEM238C9JI98 176 aa12.86□□□□□ -0.35
PDLIM2-205ENST00000397761 C2orf82Q6UX34 121 aa12.86□□□□□ -0.35
PDLIM2-205ENST00000397761 ALMS1Q8TCU4 4167 aa12.86□□□□□ -0.35
PDLIM2-205ENST00000397761 CKS1BP61024 79 aa12.85□□□□□ -0.35
PDLIM2-205ENST00000397761 F8WDY8 70 aa12.85□□□□□ -0.35
PDLIM2-205ENST00000397761 Q6ZRN7 208 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-205ENST00000397761 C2orf48Q96LS8 159 aa12.85□□□□□ -0.35
PDLIM2-205ENST00000397761 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
PDLIM2-205ENST00000397761 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
PDLIM2-205ENST00000397761 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
PDLIM2-205ENST00000397761 C6orf223Q8N319 242 aa12.84□□□□□ -0.35
PDLIM2-205ENST00000397761 USP17L23D6RBM5 183 aa12.83□□□□□ -0.36
PDLIM2-205ENST00000397761 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
PDLIM2-205ENST00000397761 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
PDLIM2-205ENST00000397761 ZNF561-AS1K7EIQ3 104 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 LY6G6CO95867 125 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 CIRBPQ14011 172 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 HIGD2BQ4VC39 106 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 BVES-AS1Q5T3Y7 98 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 Q6ZVH6 145 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 SNHG12Q9BXW3 62 aa12.82□□□□□ -0.36
PDLIM2-205ENST00000397761 M0R143 59 aa12.81□□□□□ -0.36
PDLIM2-205ENST00000397761 C10orf25Q5T742 122 aa12.81□□□□□ -0.36
PDLIM2-205ENST00000397761 CEND1Q8N111 149 aa12.81□□□□□ -0.36
PDLIM2-205ENST00000397761 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-205ENST00000397761 SRSF9Q13242 221 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDLIM2-205ENST00000397761 MEIG1Q5JSS6 88 aa12.8□□□□□ -0.36
PDLIM2-205ENST00000397761 UNQ6190/PRO20217Q6UXQ8 127 aa12.8□□□□□ -0.36
PDLIM2-205ENST00000397761 ERG28Q9UKR5 140 aa12.8□□□□□ -0.36
PDLIM2-205ENST00000397761 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
PDLIM2-205ENST00000397761 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
PDLIM2-205ENST00000397761 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
PDLIM2-205ENST00000397761 M0R2N4 97 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 COX17Q14061 63 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 EREGO14944 169 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 PSCAO43653 123 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
PDLIM2-205ENST00000397761 GCSHP23434 173 aa12.77□□□□□ -0.37
PDLIM2-205ENST00000397761 WFDC2Q14508 124 aa12.77□□□□□ -0.37
PDLIM2-205ENST00000397761 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
PDLIM2-205ENST00000397761 C6orf48Q9UBA6 75 aa12.77□□□□□ -0.37
PDLIM2-205ENST00000397761 LCE6AA0A183 80 aa12.76□□□□□ -0.37
PDLIM2-205ENST00000397761 IFITM1P13164 125 aa12.76□□□□□ -0.37
PDLIM2-205ENST00000397761 FXYD2P54710 66 aa12.76□□□□□ -0.37
PDLIM2-205ENST00000397761 DNAH10Q8IVF4 4471 aa12.76□□□□□ -0.37
PDLIM2-205ENST00000397761 LRCOL1A6NCL2 159 aa12.75□□□□□ -0.37
PDLIM2-205ENST00000397761 Q6ZRU5 148 aa12.75□□□□□ -0.37
PDLIM2-205ENST00000397761 DAND5Q8N907 189 aa12.75□□□□□ -0.37
PDLIM2-205ENST00000397761 A0A0U1RRA0 63 aa12.74□□□□□ -0.37
PDLIM2-205ENST00000397761 C9orf116Q5BN46 136 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-205ENST00000397761 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
PDLIM2-205ENST00000397761 LECT2O14960 151 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 SLPIP03973 132 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 PFN2P35080 140 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 LINC00158P58513 81 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 SYCNQ0VAF6 134 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 MIR7-3HGQ8N6C7 128 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 LINC00308Q8TCZ7 52 aa12.73□□□□□ -0.37
PDLIM2-205ENST00000397761 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 C14orf177Q52M58 125 aa12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 BATFQ16520 125 aa12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 SOSTDC1Q6X4U4 206 aa12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 COPS9Q8WXC6 57 aa12.72□□□□□ -0.37
PDLIM2-205ENST00000397761 LOC107984156A0A0G2JMH3 177 aa12.71□□□□□ -0.38
PDLIM2-205ENST00000397761 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.38
PDLIM2-205ENST00000397761 ARL17AQ8IVW1 177 aa12.71□□□□□ -0.38
PDLIM2-205ENST00000397761 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
PDLIM2-205ENST00000397761 CARD19Q96LW7 228 aa12.7□□□□□ -0.38
PDLIM2-205ENST00000397761 TMEM238LA0A1B0GVL6 79 aa12.69□□□□□ -0.38
PDLIM2-205ENST00000397761 A0A1B0GWB2 263 aa12.69□□□□□ -0.38
PDLIM2-205ENST00000397761 A6NJY4 79 aa12.69□□□□□ -0.38
PDLIM2-205ENST00000397761 CNBPP62633 177 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-205ENST00000397761 LBHQ53QV2 105 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-205ENST00000397761 HYDINQ4G0P3 5121 aa12.68□□□□□ -0.38
PDLIM2-205ENST00000397761 A4D1N5 150 aa12.68□□□□□ -0.38
PDLIM2-205ENST00000397761 A6NDN8 102 aa12.68□□□□□ -0.38
PDLIM2-205ENST00000397761 NPC2P61916 151 aa12.67□□□□□ -0.38
PDLIM2-205ENST00000397761 TLX1NBP0CAT3 122 aa12.66□□□□□ -0.38
PDLIM2-205ENST00000397761 COL5A1-AS1Q5SY13 56 aa12.65□□□□□ -0.38
PDLIM2-205ENST00000397761 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
PDLIM2-205ENST00000397761 NDUFC2-KCTD14E9PQ53 114 aa12.65□□□□□ -0.38
PDLIM2-205ENST00000397761 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-205ENST00000397761 A0A087WTM6 91 aa12.64□□□□□ -0.39
PDLIM2-205ENST00000397761 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-205ENST00000397761 CFC1BP0CG36 223 aa12.63□□□□□ -0.39
PDLIM2-205ENST00000397761 CFC1P0CG37 223 aa12.63□□□□□ -0.39
PDLIM2-205ENST00000397761 Q8N814 137 aa12.62□□□□□ -0.39
PDLIM2-205ENST00000397761 DNAH2Q9P225 4427 aa12.62□□□□□ -0.39
PDLIM2-205ENST00000397761 A0A0B4J2C4 111 aa12.61□□□□□ -0.39
PDLIM2-205ENST00000397761 K7ERJ3 54 aa12.6□□□□□ -0.39
PDLIM2-205ENST00000397761 Q6ZRP5 223 aa12.6□□□□□ -0.39
PDLIM2-205ENST00000397761 FRAS1Q86XX4 4008 aa12.59□□□□□ -0.39
PDLIM2-205ENST00000397761 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms