RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RELNP78509 3460 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 DEFB1P60022 68 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 FBN1P35555 2871 aaKnown RBP4.12□□□□□ -1.75
PTPRD-206ENST00000397617 CCL18P55774 89 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 NOP10Q9NPE3 64 aaKnown RBP4.12□□□□□ -1.75
PTPRD-206ENST00000397617 CDKN2A-AS1Q9UH64 79 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 FAM104AQ969W3 186 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 C1orf43Q9BWL3 253 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 ICOSQ9Y6W8 199 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 TENM2Q9NT68 2774 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 UBE2BP63146 152 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 hADV29S1A0JD25 119 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
PTPRD-206ENST00000397617 RBX1P62877 108 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.11□□□□□ -1.75
PTPRD-206ENST00000397617 C2orf48Q96LS8 159 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 A0A1B0GW54 56 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 KRTAP21-3Q3LHN1 58 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 BSNQ9UPA5 3926 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 Q6ZQT7 251 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 NTM-AS1Q6ZSK4 140 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 LITAFQ99732 161 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 A4D1N5 150 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 Q6ZUT4 128 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 TRAV13-1A0A0B4J241 112 aa4.11□□□□□ -1.75
PTPRD-206ENST00000397617 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
PTPRD-206ENST00000397617 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
PTPRD-206ENST00000397617 K7ERS5 55 aa4.1□□□□□ -1.75
PTPRD-206ENST00000397617 RPL28P46779 137 aaKnown RBP4.1□□□□□ -1.75
PTPRD-206ENST00000397617 DAND5Q8N907 189 aa4.1□□□□□ -1.75
PTPRD-206ENST00000397617 EDN2P20800 178 aa4.1□□□□□ -1.75
PTPRD-206ENST00000397617 MAPKAPK5-AS1Q8N8E1 139 aa4.1□□□□□ -1.75
PTPRD-206ENST00000397617 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 SEC61GP60059 68 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 ASPMQ8IZT6 3477 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 LINC01556Q5JQF7 62 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 HIST2H2BCQ6DN03 193 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 HIST2H2BDQ6DRA6 164 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.75
PTPRD-206ENST00000397617 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.76
PTPRD-206ENST00000397617 GYPEP15421 78 aa4.09□□□□□ -1.76
PTPRD-206ENST00000397617 TRAV8-3A0A0A6YYJ7 113 aa4.09□□□□□ -1.76
PTPRD-206ENST00000397617 ETDCA0A1B0GVM5 59 aa4.09□□□□□ -1.76
PTPRD-206ENST00000397617 IGHV3-64A0A075B6Q5 118 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 LINC00643Q86TS7 51 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 A0A0U1RQV1 116 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 NHLRC4P0CG21 123 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-206ENST00000397617 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
PTPRD-206ENST00000397617 LST1O00453 97 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 COX7A2LO14548 114 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 PRO0461Q9UI25 63 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 BCE1O60756 84 aa4.08□□□□□ -1.76
PTPRD-206ENST00000397617 TGP01266 2768 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
PTPRD-206ENST00000397617 Q9H8V8 135 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 OPRPNQ99935 248 aaPredicted RBP4.07□□□□□ -1.76
PTPRD-206ENST00000397617 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 DNAH10OSP0CZ25 163 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 HAMPP81172 84 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 ORMDL1Q9P0S3 153 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 TRAV10A0A0B4J240 114 aa4.07□□□□□ -1.76
PTPRD-206ENST00000397617 ANGP03950 147 aaKnown RBP4.06□□□□□ -1.76
PTPRD-206ENST00000397617 TM2D3Q9BRN9 247 aa4.06□□□□□ -1.76
PTPRD-206ENST00000397617 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
PTPRD-206ENST00000397617 Q6ZSN1 163 aa4.06□□□□□ -1.76
PTPRD-206ENST00000397617 SPENQ96T58 3664 aaKnown RBP4.06□□□□□ -1.76
PTPRD-206ENST00000397617 IGHV3-38A0A0C4DH36 116 aa4.06□□□□□ -1.76
PTPRD-206ENST00000397617 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
PTPRD-206ENST00000397617 C9JAW5 83 aa4.05□□□□□ -1.76
PTPRD-206ENST00000397617 DEFB135Q30KP9 77 aa4.05□□□□□ -1.76
PTPRD-206ENST00000397617 LINC01620Q4KN68 170 aa4.05□□□□□ -1.76
PTPRD-206ENST00000397617 FOXI1Q12951 378 aa4.05□□□□□ -1.76
PTPRD-206ENST00000397617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.05□□□□□ -1.76
PTPRD-206ENST00000397617 IGKV2-29A2NJV5 120 aaPredicted RBP4.05□□□□□ -1.76
PTPRD-206ENST00000397617 C3orf22Q8N5N4 141 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 IGKV2D-24A0A075B6R9 120 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 CAMK2N2Q96S95 79 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
PTPRD-206ENST00000397617 FXYD7P58549 80 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 KRTAP24-1Q3LI83 254 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 KRTAP10-3P60369 221 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 A0A096LPF7 62 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 REG3AQ06141 175 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 MUSTN1Q8IVN3 82 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
PTPRD-206ENST00000397617 PLA2G2DQ9UNK4 145 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 NDUFS5O43920 106 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 PFN2P35080 140 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 ETDBQ3ZM63 59 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 TTTY13Q9BZ97 58 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms