RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 IBA57-AS1B1ANH7 110 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 CRYGAP11844 174 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 Q6YL49 198 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 IGHV4-30-2A0A087WSY4 118 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
PTPRD-205ENST00000397611 FAM19A1Q7Z5A9 133 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 LINC01561Q8N1V8 128 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 ATRQ13535 2644 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 HRNRQ86YZ3 2850 aaPredicted RBP3.92□□□□□ -1.78
PTPRD-205ENST00000397611 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 C3orf84H3BNL1 204 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 PRM2P04554 102 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 APOC4P55056 127 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 FAM30AQ9NZY2 134 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
PTPRD-205ENST00000397611 IGKV2D-24A0A075B6R9 120 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 Q6ZQY7 126 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 TRBV6-4A0A1B0GX49 114 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 CCL18P55774 89 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 CHCHD7Q9BUK0 85 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 TNRC18O15417 2968 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-205ENST00000397611 LINC00269Q8N2A0 174 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 MAP6D1Q9H9H5 199 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
PTPRD-205ENST00000397611 LINC00242Q5T6M2 205 aa3.91□□□□□ -1.78
PTPRD-205ENST00000397611 COX6A2Q02221 97 aa3.9□□□□□ -1.78
PTPRD-205ENST00000397611 FAM104AQ969W3 186 aa3.9□□□□□ -1.78
PTPRD-205ENST00000397611 ZNF702PQ9H963 129 aa3.9□□□□□ -1.78
PTPRD-205ENST00000397611 CELA1Q9UNI1 258 aa3.9□□□□□ -1.78
PTPRD-205ENST00000397611 DEFB114Q30KQ6 69 aa3.9□□□□□ -1.78
PTPRD-205ENST00000397611 C19orf84I3L1E1 186 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 PSPHP1O15172 72 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 AVPP01185 164 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 RPL28P46779 137 aaKnown RBP3.9□□□□□ -1.79
PTPRD-205ENST00000397611 VCANP13611 3396 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 DEFB4AO15263 64 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 EDN2P20800 178 aa3.9□□□□□ -1.79
PTPRD-205ENST00000397611 TEP1Q99973 2627 aaKnown RBP3.89□□□□□ -1.79
PTPRD-205ENST00000397611 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 PSCAO43653 123 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 C4orf3Q8WVX3 66 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 ZANQ9Y493 2812 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 A6NED7 52 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 WFDC10BQ8IUB3 73 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
PTPRD-205ENST00000397611 KALRNO60229 2985 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
PTPRD-205ENST00000397611 EIF4EBP3O60516 100 aaPredicted RBP3.88□□□□□ -1.79
PTPRD-205ENST00000397611 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
PTPRD-205ENST00000397611 XAGE1AQ9HD64 81 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 PRYO14603 147 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 A0A0J9YWU9 116 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 C10orf99Q6UWK7 81 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 SMCR5Q8TEV8 140 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
PTPRD-205ENST00000397611 REG3AQ06141 175 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 Q8N3U1 123 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 Q8N814 137 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 UBR5O95071 2799 aaPredicted RBP3.88□□□□□ -1.79
PTPRD-205ENST00000397611 UBE2AP49459 152 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 BOD1L1Q8NFC6 3051 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 TACC2O95359 2948 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 ATMQ13315 3056 aa3.88□□□□□ -1.79
PTPRD-205ENST00000397611 H0Y9J4 135 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 FLNBO75369 2602 aaKnown RBP3.87□□□□□ -1.79
PTPRD-205ENST00000397611 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
PTPRD-205ENST00000397611 CCL24O00175 119 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 DMXL2Q8TDJ6 3036 aa3.87□□□□□ -1.79
PTPRD-205ENST00000397611 NDUFB1O75438 58 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 TMEM254Q8TBM7 123 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 A0A1B0GUV1 79 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 BCE1O60756 84 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 TRBV6-8A0A0A6YYG3 113 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
PTPRD-205ENST00000397611 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-205ENST00000397611 A0A087WZ39 114 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 MXRA5Q9NR99 2828 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 LYRM9A8MSI8 78 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 FHL2Q14192 279 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 Q6ZSN1 163 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 Q6ZVQ6 151 aa3.85□□□□□ -1.79
PTPRD-205ENST00000397611 HECTD1Q9ULT8 2610 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms