RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SPTY2D1-AS1A0A0U1RR47 76 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 COX6CP09669 75 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 DEFA4P12838 97 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 LYPD5Q6UWN5 251 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 FAM223AQ8IWN6 122 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 RNF5Q99942 180 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 GFRA4Q9GZZ7 299 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 NUP214P35658 2090 aaPredicted RBP4.36□□□□□ -1.71
SMCO1-201ENST00000397537 MDC1Q14676 2089 aaKnown RBP4.36□□□□□ -1.71
SMCO1-201ENST00000397537 CNTRLQ7Z7A1 2325 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 CACNA1CQ13936 2221 aa4.36□□□□□ -1.71
SMCO1-201ENST00000397537 IGKV1D-17A0A075B6S4 117 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 A0A096LNJ9 63 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 A0A0J9YWU9 116 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 MSMBP08118 114 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
SMCO1-201ENST00000397537 PLNP26678 52 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 C15orf32Q32M92 178 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 S100A7L2Q5SY68 101 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.35□□□□□ -1.71
SMCO1-201ENST00000397537 DYNAPQ8N1N2 210 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 RETNLBQ9BQ08 111 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 TRBV30A0A0K0K1B3 111 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 PIRTP0C851 137 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 Q5W150 140 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 ZNF818PQ6ZRF7 136 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 C20orf197Q8N268 126 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 Q96M85 177 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 TIMM21Q9BVV7 248 aa4.35□□□□□ -1.71
SMCO1-201ENST00000397537 IGKV2D-26A0A0A0MRZ7 120 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 TMEM14DPA8MWL7 114 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 CD24P25063 80 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 VMO1Q7Z5L0 202 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 Q8IYB0 196 aa4.34□□□□□ -1.71
SMCO1-201ENST00000397537 ARID1AO14497 2285 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 FAM223BA6NKX1 122 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 B4DSR2 109 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 H3BQ85 93 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 DNAH10OSP0CZ25 163 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 GDF5OSQ5U4N7 250 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 TMEM167BQ9NRX6 74 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 PSENENQ9NZ42 101 aa4.33□□□□□ -1.72
SMCO1-201ENST00000397537 TMEM30CPA0ZSE6 113 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 SLPIP03973 132 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
SMCO1-201ENST00000397537 FXYD3Q14802 87 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 ZNF826PQ6ZT77 177 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 FDCSPQ8NFU4 85 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
SMCO1-201ENST00000397537 WNK1Q9H4A3 2382 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 TRBV10-3A0A0K0K1G6 114 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 PANO1I0J062 215 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 LYPD6Q86Y78 171 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 PROK2Q9HC23 129 aa4.32□□□□□ -1.72
SMCO1-201ENST00000397537 AGRNO00468 2067 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 IGLV3-32A0A0A0MS00 114 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 TRBV6-6A0A0A6YYG2 114 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 HIGD1CA8MV81 97 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 GNRH2O43555 120 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 CLPSP04118 112 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 TTTY10Q9BZA0 68 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
SMCO1-201ENST00000397537 SVEP1Q4LDE5 3571 aa4.31□□□□□ -1.72
SMCO1-201ENST00000397537 F8WEM9 126 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 IGHV3-33P01772 117 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 UBE2D4Q9Y2X8 147 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 IGLV3-12A0A075B6K2 115 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 HMGN4O00479 90 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 Q8N814 137 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 WFDC6Q9BQY6 131 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 LHFPL6Q9Y693 200 aa4.3□□□□□ -1.72
SMCO1-201ENST00000397537 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
SMCO1-201ENST00000397537 K7EMI3 77 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 ARL14EPLP0DKL9 152 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 FAM27BQ5VT28 67 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 UBALD1Q8TB05 177 aa4.29□□□□□ -1.72
SMCO1-201ENST00000397537 HRNRQ86YZ3 2850 aaPredicted RBP4.29□□□□□ -1.72
SMCO1-201ENST00000397537 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 H3BPC8 53 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 ZNF861PO60384 105 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 MIFP14174 115 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 SFTA2Q6UW10 78 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 CYYR1Q96J86 154 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 ERC2-IT1O76042 136 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 ROMO1P60602 79 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 FAM215AQ9Y5M1 114 aa4.28□□□□□ -1.72
SMCO1-201ENST00000397537 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 A0A087WYN8 130 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 TRAV12-1A0A0B4J245 112 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
SMCO1-201ENST00000397537 DEFB113Q30KQ7 82 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms