RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ATP5G1P05496 136 aa10.89□□□□□ -0.67
HOXA3-202ENST00000396352 OBSCN-AS1Q96MR7 158 aa10.89□□□□□ -0.67
HOXA3-202ENST00000396352 PAX4O43316 350 aa10.88□□□□□ -0.67
HOXA3-202ENST00000396352 LY6G6DO95868 133 aa10.88□□□□□ -0.67
HOXA3-202ENST00000396352 GYPEP15421 78 aa10.88□□□□□ -0.67
HOXA3-202ENST00000396352 XCL1P47992 114 aa10.88□□□□□ -0.67
HOXA3-202ENST00000396352 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
HOXA3-202ENST00000396352 A0A1B0GUV1 79 aa10.87□□□□□ -0.67
HOXA3-202ENST00000396352 ACANP16112 2415 aa10.87□□□□□ -0.67
HOXA3-202ENST00000396352 LECT2O14960 151 aa10.87□□□□□ -0.67
HOXA3-202ENST00000396352 MTORP42345 2549 aa10.87□□□□□ -0.67
HOXA3-202ENST00000396352 CXCL5P42830 114 aa10.86□□□□□ -0.67
HOXA3-202ENST00000396352 Q8IZM0 81 aa10.86□□□□□ -0.67
HOXA3-202ENST00000396352 C14orf132Q9NPU4 83 aa10.86□□□□□ -0.67
HOXA3-202ENST00000396352 GCN1Q92616 2671 aaKnown RBP10.86□□□□□ -0.67
HOXA3-202ENST00000396352 SS18Q15532 418 aa10.85□□□□□ -0.67
HOXA3-202ENST00000396352 CLPSL2Q6UWE3 100 aa10.85□□□□□ -0.67
HOXA3-202ENST00000396352 OR13C6PQ8NH95 151 aa10.85□□□□□ -0.67
HOXA3-202ENST00000396352 X6R8D5 127 aa10.85□□□□□ -0.67
HOXA3-202ENST00000396352 KLK5Q9Y337 293 aaPredicted RBP10.83□□□□□ -0.68
HOXA3-202ENST00000396352 SLPIP03973 132 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 HILS1P60008 231 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 FN1P02751 2386 aaKnown RBP10.82□□□□□ -0.68
HOXA3-202ENST00000396352 A0A096LPF7 62 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 C3orf56Q8N813 242 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 NBEAL2Q6ZNJ1 2754 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 PRO0255Q9UI72 69 aa10.82□□□□□ -0.68
HOXA3-202ENST00000396352 NANOS2P60321 138 aaKnown RBP10.81□□□□□ -0.68
HOXA3-202ENST00000396352 NCR3O14931 201 aa10.81□□□□□ -0.68
HOXA3-202ENST00000396352 SVIPQ8NHG7 77 aa10.81□□□□□ -0.68
HOXA3-202ENST00000396352 KIAA0087Q14695 138 aa10.8□□□□□ -0.68
HOXA3-202ENST00000396352 LINC00482Q8N8I6 264 aa10.8□□□□□ -0.68
HOXA3-202ENST00000396352 HIST1H4AP62805 103 aaKnown RBP10.79□□□□□ -0.68
HOXA3-202ENST00000396352 PRR3P79522 188 aaKnown RBP10.79□□□□□ -0.68
HOXA3-202ENST00000396352 LINC00846Q9NV44 126 aa10.79□□□□□ -0.68
HOXA3-202ENST00000396352 LINC00167Q96N53 147 aa10.79□□□□□ -0.68
HOXA3-202ENST00000396352 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
HOXA3-202ENST00000396352 LINC00269Q8N2A0 174 aa10.78□□□□□ -0.68
HOXA3-202ENST00000396352 ORMDL1Q9P0S3 153 aa10.78□□□□□ -0.68
HOXA3-202ENST00000396352 VWFP04275 2813 aa10.78□□□□□ -0.68
HOXA3-202ENST00000396352 Q8N3U1 123 aa10.78□□□□□ -0.68
HOXA3-202ENST00000396352 SMIM9A6NGZ8 99 aa10.77□□□□□ -0.68
HOXA3-202ENST00000396352 C3orf22Q8N5N4 141 aa10.77□□□□□ -0.68
HOXA3-202ENST00000396352 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
HOXA3-202ENST00000396352 NDUFC2O95298 119 aa10.76□□□□□ -0.69
HOXA3-202ENST00000396352 COX17Q14061 63 aa10.75□□□□□ -0.69
HOXA3-202ENST00000396352 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
HOXA3-202ENST00000396352 UQCRQO14949 82 aa10.75□□□□□ -0.69
HOXA3-202ENST00000396352 Q6JHZ5 121 aa10.75□□□□□ -0.69
HOXA3-202ENST00000396352 TMEM126AQ9H061 195 aa10.75□□□□□ -0.69
HOXA3-202ENST00000396352 SMIM20Q8N5G0 67 aa10.75□□□□□ -0.69
HOXA3-202ENST00000396352 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 Q8N814 137 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 Q8NDZ9 215 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 SPATA3Q8NHX4 192 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 LYRM9A8MSI8 78 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
HOXA3-202ENST00000396352 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 C2orf48Q96LS8 159 aa10.74□□□□□ -0.69
HOXA3-202ENST00000396352 A0A1B0GX51 115 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 C9orf153Q5TBE3 101 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 DEFB4AO15263 64 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 REG3AQ06141 175 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 CFAP161Q6P656 301 aa10.73□□□□□ -0.69
HOXA3-202ENST00000396352 ANGP03950 147 aaKnown RBP10.72□□□□□ -0.69
HOXA3-202ENST00000396352 CCKP06307 115 aa10.71□□□□□ -0.69
HOXA3-202ENST00000396352 COX7CP15954 63 aa10.71□□□□□ -0.69
HOXA3-202ENST00000396352 DEFB135Q30KP9 77 aa10.7□□□□□ -0.7
HOXA3-202ENST00000396352 SMR3AQ99954 134 aa10.7□□□□□ -0.7
HOXA3-202ENST00000396352 ATOX1O00244 68 aa10.7□□□□□ -0.7
HOXA3-202ENST00000396352 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
HOXA3-202ENST00000396352 A0A087WVE0 104 aa10.68□□□□□ -0.7
HOXA3-202ENST00000396352 JMJD7-PLA2G4BH0Y9G9 81 aa10.68□□□□□ -0.7
HOXA3-202ENST00000396352 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
HOXA3-202ENST00000396352 C6orf99Q4VX62 202 aa10.67□□□□□ -0.7
HOXA3-202ENST00000396352 C10orf25Q5T742 122 aa10.67□□□□□ -0.7
HOXA3-202ENST00000396352 CELA1Q9UNI1 258 aa10.67□□□□□ -0.7
HOXA3-202ENST00000396352 UNC79Q9P2D8 2635 aa10.66□□□□□ -0.7
HOXA3-202ENST00000396352 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
HOXA3-202ENST00000396352 DAD1P61803 113 aa10.66□□□□□ -0.7
HOXA3-202ENST00000396352 CRYGAP11844 174 aa10.65□□□□□ -0.7
HOXA3-202ENST00000396352 UNQ6190/PRO20217Q6UXQ8 127 aa10.65□□□□□ -0.7
HOXA3-202ENST00000396352 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
HOXA3-202ENST00000396352 Q8NAQ8 132 aa10.64□□□□□ -0.71
HOXA3-202ENST00000396352 LINC00575Q6W349 94 aa10.64□□□□□ -0.71
HOXA3-202ENST00000396352 HIVEP2P31629 2446 aa10.63□□□□□ -0.71
HOXA3-202ENST00000396352 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
HOXA3-202ENST00000396352 TENM1Q9UKZ4 2725 aa10.63□□□□□ -0.71
HOXA3-202ENST00000396352 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
HOXA3-202ENST00000396352 APOC4P55056 127 aa10.62□□□□□ -0.71
HOXA3-202ENST00000396352 CYSTM1Q9H1C7 97 aa10.62□□□□□ -0.71
HOXA3-202ENST00000396352 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
HOXA3-202ENST00000396352 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
HOXA3-202ENST00000396352 USP17L23D6RBM5 183 aa10.61□□□□□ -0.71
HOXA3-202ENST00000396352 CYSRT1A8MQ03 144 aa10.6□□□□□ -0.71
HOXA3-202ENST00000396352 LELP1Q5T871 98 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms