RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 A0A087WYN8 130 aa12.39□□□□□ -0.43
UBFD1-201ENST00000395878 C1orf137Q5JT78 98 aa12.39□□□□□ -0.43
UBFD1-201ENST00000395878 A0A0U1RQV1 116 aa12.38□□□□□ -0.43
UBFD1-201ENST00000395878 LY6G6CO95867 125 aa12.38□□□□□ -0.43
UBFD1-201ENST00000395878 PRR4Q16378 134 aa12.38□□□□□ -0.43
UBFD1-201ENST00000395878 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
UBFD1-201ENST00000395878 F8WDY8 70 aa12.37□□□□□ -0.43
UBFD1-201ENST00000395878 RETNQ9HD89 108 aa12.37□□□□□ -0.43
UBFD1-201ENST00000395878 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
UBFD1-201ENST00000395878 REG3GQ6UW15 175 aa12.37□□□□□ -0.43
UBFD1-201ENST00000395878 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
UBFD1-201ENST00000395878 Q6ZSN1 163 aa12.36□□□□□ -0.43
UBFD1-201ENST00000395878 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
UBFD1-201ENST00000395878 PRR3P79522 188 aaKnown RBP12.36□□□□□ -0.43
UBFD1-201ENST00000395878 COL5A1P20908 1838 aaPredicted RBP12.36□□□□□ -0.43
UBFD1-201ENST00000395878 CPAMD8Q8IZJ3 1885 aa12.35□□□□□ -0.43
UBFD1-201ENST00000395878 Q6ZTC4 211 aa12.35□□□□□ -0.43
UBFD1-201ENST00000395878 LINC01561Q8N1V8 128 aa12.35□□□□□ -0.43
UBFD1-201ENST00000395878 CELA1Q9UNI1 258 aa12.34□□□□□ -0.43
UBFD1-201ENST00000395878 A6NED7 52 aa12.33□□□□□ -0.43
UBFD1-201ENST00000395878 RAI1Q7Z5J4 1906 aaPredicted RBP12.33□□□□□ -0.44
UBFD1-201ENST00000395878 SERP1Q9Y6X1 66 aa12.33□□□□□ -0.44
UBFD1-201ENST00000395878 C2orf48Q96LS8 159 aa12.32□□□□□ -0.44
UBFD1-201ENST00000395878 SMIM26A0A096LP01 95 aa12.31□□□□□ -0.44
UBFD1-201ENST00000395878 A0A087WVE0 104 aa12.3□□□□□ -0.44
UBFD1-201ENST00000395878 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
UBFD1-201ENST00000395878 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.44
UBFD1-201ENST00000395878 PRYO14603 147 aa12.27□□□□□ -0.44
UBFD1-201ENST00000395878 LINC00208Q96KT6 92 aa12.27□□□□□ -0.45
UBFD1-201ENST00000395878 ESRGQ1W209 222 aa12.27□□□□□ -0.45
UBFD1-201ENST00000395878 Q8N3U1 123 aa12.25□□□□□ -0.45
UBFD1-201ENST00000395878 LINC01546A6NGU7 62 aa12.25□□□□□ -0.45
UBFD1-201ENST00000395878 LINC00575Q6W349 94 aa12.25□□□□□ -0.45
UBFD1-201ENST00000395878 Q9BRP9 147 aa12.24□□□□□ -0.45
UBFD1-201ENST00000395878 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
UBFD1-201ENST00000395878 JMJD1CQ15652 2540 aa12.22□□□□□ -0.45
UBFD1-201ENST00000395878 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
UBFD1-201ENST00000395878 ABCA12Q86UK0 2595 aa12.21□□□□□ -0.45
UBFD1-201ENST00000395878 LINC01547P58512 204 aaPredicted RBP12.21□□□□□ -0.45
UBFD1-201ENST00000395878 CIRBP-AS1Q8TBR5 109 aa12.21□□□□□ -0.45
UBFD1-201ENST00000395878 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.46
UBFD1-201ENST00000395878 LINC00337Q8N6G1 96 aa12.21□□□□□ -0.46
UBFD1-201ENST00000395878 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.46
UBFD1-201ENST00000395878 Q8N2B8 174 aa12.2□□□□□ -0.46
UBFD1-201ENST00000395878 IGHV6-1A0A0B4J1U7 121 aa12.19□□□□□ -0.46
UBFD1-201ENST00000395878 USP9XQ93008 2570 aaPredicted RBP12.19□□□□□ -0.46
UBFD1-201ENST00000395878 Q6ZRU5 148 aa12.19□□□□□ -0.46
UBFD1-201ENST00000395878 Q6ZVQ6 151 aa12.19□□□□□ -0.46
UBFD1-201ENST00000395878 A0A087WSZ3 146 aa12.19□□□□□ -0.46
UBFD1-201ENST00000395878 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
UBFD1-201ENST00000395878 FAM19A4Q96LR4 140 aa12.17□□□□□ -0.46
UBFD1-201ENST00000395878 LINC00846Q9NV44 126 aa12.17□□□□□ -0.46
UBFD1-201ENST00000395878 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
UBFD1-201ENST00000395878 LINC00315P59091 139 aa12.16□□□□□ -0.46
UBFD1-201ENST00000395878 AGRNO00468 2067 aa12.16□□□□□ -0.46
UBFD1-201ENST00000395878 WDR87Q6ZQQ6 2873 aa12.16□□□□□ -0.46
UBFD1-201ENST00000395878 TLN2Q9Y4G6 2542 aa12.16□□□□□ -0.46
UBFD1-201ENST00000395878 TRBV7-7A0A0K0K1E9 115 aa12.15□□□□□ -0.46
UBFD1-201ENST00000395878 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
UBFD1-201ENST00000395878 A8MTW9 85 aa12.14□□□□□ -0.47
UBFD1-201ENST00000395878 TRBV7-6A0A0J9YX20 115 aa12.13□□□□□ -0.47
UBFD1-201ENST00000395878 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
UBFD1-201ENST00000395878 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
UBFD1-201ENST00000395878 ZFYVE26Q68DK2 2539 aa12.13□□□□□ -0.47
UBFD1-201ENST00000395878 TMEM254Q8TBM7 123 aa12.11□□□□□ -0.47
UBFD1-201ENST00000395878 CXCL6P80162 114 aa12.11□□□□□ -0.47
UBFD1-201ENST00000395878 H0Y9P7 68 aa12.11□□□□□ -0.47
UBFD1-201ENST00000395878 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
UBFD1-201ENST00000395878 HCG22E2RYF7 251 aa12.1□□□□□ -0.47
UBFD1-201ENST00000395878 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
UBFD1-201ENST00000395878 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
UBFD1-201ENST00000395878 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
UBFD1-201ENST00000395878 FHL3Q13643 280 aa12.09□□□□□ -0.47
UBFD1-201ENST00000395878 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
UBFD1-201ENST00000395878 IGLV5-45A0A087WSX0 123 aa12.08□□□□□ -0.48
UBFD1-201ENST00000395878 PRLHP81277 87 aa12.07□□□□□ -0.48
UBFD1-201ENST00000395878 CEP295Q9C0D2 2601 aa12.07□□□□□ -0.48
UBFD1-201ENST00000395878 DEFB116Q30KQ4 102 aa12.06□□□□□ -0.48
UBFD1-201ENST00000395878 SMCR5Q8TEV8 140 aa12.06□□□□□ -0.48
UBFD1-201ENST00000395878 LRRK2Q5S007 2527 aa12.06□□□□□ -0.48
UBFD1-201ENST00000395878 ANKRD11Q6UB99 2663 aaPredicted RBP12.05□□□□□ -0.48
UBFD1-201ENST00000395878 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
UBFD1-201ENST00000395878 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
UBFD1-201ENST00000395878 hDV103S1A0JD37 113 aa12.04□□□□□ -0.48
UBFD1-201ENST00000395878 SETD2Q9BYW2 2564 aaPredicted RBP12.04□□□□□ -0.48
UBFD1-201ENST00000395878 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
UBFD1-201ENST00000395878 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
UBFD1-201ENST00000395878 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
UBFD1-201ENST00000395878 EP400Q96L91 3159 aa12.01□□□□□ -0.49
UBFD1-201ENST00000395878 PMAIP1Q13794 54 aa12.01□□□□□ -0.49
UBFD1-201ENST00000395878 LIMD2Q9BT23 127 aa12.01□□□□□ -0.49
UBFD1-201ENST00000395878 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
UBFD1-201ENST00000395878 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
UBFD1-201ENST00000395878 H3BNG1 76 aa11.99□□□□□ -0.49
UBFD1-201ENST00000395878 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
UBFD1-201ENST00000395878 SBSPONQ8IVN8 264 aa11.99□□□□□ -0.49
UBFD1-201ENST00000395878 PSPHP1O15172 72 aa11.97□□□□□ -0.49
UBFD1-201ENST00000395878 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
UBFD1-201ENST00000395878 A0A1B0GW54 56 aa11.96□□□□□ -0.5
UBFD1-201ENST00000395878 C1orf64Q8NEQ6 169 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms