RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MEIG1Q5JSS6 88 aa13.5□□□□□ -0.25
VCPKMT-202ENST00000395860 C6orf223Q8N319 242 aa13.5□□□□□ -0.25
VCPKMT-202ENST00000395860 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
VCPKMT-202ENST00000395860 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
VCPKMT-202ENST00000395860 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
VCPKMT-202ENST00000395860 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
VCPKMT-202ENST00000395860 GVQW2A0A096LPI5 108 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 Q6ZR54 194 aa13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 HSD52Q0P140 79 aa13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 SPANXB1Q9NS25 103 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-202ENST00000395860 TIMM17BO60830 172 aa13.47□□□□□ -0.25
VCPKMT-202ENST00000395860 LITAFQ99732 161 aa13.46□□□□□ -0.25
VCPKMT-202ENST00000395860 A0A0U1RRA0 63 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 LECT2O14960 151 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 TAL2Q16559 108 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 UNQ6190/PRO20217Q6UXQ8 127 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 HINT1P49773 126 aaPredicted RBP13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 C2orf48Q96LS8 159 aa13.45□□□□□ -0.26
VCPKMT-202ENST00000395860 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
VCPKMT-202ENST00000395860 ADAMTSL4-AS1Q5T5F5 129 aa13.44□□□□□ -0.26
VCPKMT-202ENST00000395860 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
VCPKMT-202ENST00000395860 Q6ZRN7 208 aaPredicted RBP13.44□□□□□ -0.26
VCPKMT-202ENST00000395860 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
VCPKMT-202ENST00000395860 F8WDY8 70 aa13.43□□□□□ -0.26
VCPKMT-202ENST00000395860 GCSHP23434 173 aa13.43□□□□□ -0.26
VCPKMT-202ENST00000395860 PFN2P35080 140 aa13.43□□□□□ -0.26
VCPKMT-202ENST00000395860 SPANXDQ9BXN6 97 aa13.43□□□□□ -0.26
VCPKMT-202ENST00000395860 SPANXCQ9NY87 97 aa13.43□□□□□ -0.26
VCPKMT-202ENST00000395860 M0R143 59 aa13.42□□□□□ -0.26
VCPKMT-202ENST00000395860 LINC00158P58513 81 aa13.42□□□□□ -0.26
VCPKMT-202ENST00000395860 CEND1Q8N111 149 aa13.42□□□□□ -0.26
VCPKMT-202ENST00000395860 BATFQ16520 125 aa13.41□□□□□ -0.26
VCPKMT-202ENST00000395860 DAND5Q8N907 189 aa13.41□□□□□ -0.26
VCPKMT-202ENST00000395860 WFDC2Q14508 124 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 Q6ZVH6 145 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 ALMS1Q8TCU4 4167 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 C9orf116Q5BN46 136 aaPredicted RBP13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 Q6ZRU5 148 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 C6orf48Q9UBA6 75 aa13.4□□□□□ -0.26
VCPKMT-202ENST00000395860 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
VCPKMT-202ENST00000395860 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
VCPKMT-202ENST00000395860 COX17Q14061 63 aa13.39□□□□□ -0.27
VCPKMT-202ENST00000395860 C1orf134Q5TEV5 83 aa13.39□□□□□ -0.27
VCPKMT-202ENST00000395860 NPC2P61916 151 aa13.38□□□□□ -0.27
VCPKMT-202ENST00000395860 SNHG12Q9BXW3 62 aa13.38□□□□□ -0.27
VCPKMT-202ENST00000395860 C14orf177Q52M58 125 aa13.37□□□□□ -0.27
VCPKMT-202ENST00000395860 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
VCPKMT-202ENST00000395860 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
VCPKMT-202ENST00000395860 PTTG1IPP53801 180 aa13.37□□□□□ -0.27
VCPKMT-202ENST00000395860 LRCOL1A6NCL2 159 aa13.36□□□□□ -0.27
VCPKMT-202ENST00000395860 EREGO14944 169 aa13.36□□□□□ -0.27
VCPKMT-202ENST00000395860 FXYD2P54710 66 aa13.36□□□□□ -0.27
VCPKMT-202ENST00000395860 CARD19Q96LW7 228 aa13.36□□□□□ -0.27
VCPKMT-202ENST00000395860 IFITM1P13164 125 aa13.35□□□□□ -0.27
VCPKMT-202ENST00000395860 SLPIP03973 132 aa13.35□□□□□ -0.27
VCPKMT-202ENST00000395860 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
VCPKMT-202ENST00000395860 LINC00308Q8TCZ7 52 aa13.34□□□□□ -0.27
VCPKMT-202ENST00000395860 COPS9Q8WXC6 57 aa13.34□□□□□ -0.27
VCPKMT-202ENST00000395860 KMT2AQ03164 3969 aa13.33□□□□□ -0.28
VCPKMT-202ENST00000395860 DNAH10Q8IVF4 4471 aa13.33□□□□□ -0.28
VCPKMT-202ENST00000395860 TMEM238LA0A1B0GVL6 79 aa13.32□□□□□ -0.28
VCPKMT-202ENST00000395860 A6NJY4 79 aa13.32□□□□□ -0.28
VCPKMT-202ENST00000395860 DNAH6Q9C0G6 4158 aa13.31□□□□□ -0.28
VCPKMT-202ENST00000395860 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
VCPKMT-202ENST00000395860 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 LCE6AA0A183 80 aa13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 EIF4EBP3O60516 100 aaPredicted RBP13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 A4D1N5 150 aa13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 A6NDN8 102 aa13.3□□□□□ -0.28
VCPKMT-202ENST00000395860 A0A087WTM6 91 aa13.29□□□□□ -0.28
VCPKMT-202ENST00000395860 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
VCPKMT-202ENST00000395860 NHP2Q9NX24 153 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-202ENST00000395860 CNBPP62633 177 aaKnown RBP13.28□□□□□ -0.28
VCPKMT-202ENST00000395860 NDUFC2-KCTD14E9PQ53 114 aa13.27□□□□□ -0.28
VCPKMT-202ENST00000395860 Q8N814 137 aa13.27□□□□□ -0.28
VCPKMT-202ENST00000395860 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.28
VCPKMT-202ENST00000395860 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.28
VCPKMT-202ENST00000395860 COL5A1-AS1Q5SY13 56 aa13.25□□□□□ -0.29
VCPKMT-202ENST00000395860 TLX1NBP0CAT3 122 aa13.24□□□□□ -0.29
VCPKMT-202ENST00000395860 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 GAGE2EQ4V326 116 aa13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 Q6ZRP5 223 aa13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 GAGE2DQ9UEU5 116 aa13.23□□□□□ -0.29
VCPKMT-202ENST00000395860 K7ERJ3 54 aa13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 CFC1BP0CG36 223 aa13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 CFC1P0CG37 223 aa13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 XAGE1AQ9HD64 81 aa13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 RTL8CO15255 209 aa13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
VCPKMT-202ENST00000395860 LOC107984640A0A0U1RRK4 108 aa13.21□□□□□ -0.29
VCPKMT-202ENST00000395860 A0A1B0GWB2 263 aa13.21□□□□□ -0.29
VCPKMT-202ENST00000395860 RAB37Q96AX2 223 aa13.21□□□□□ -0.29
VCPKMT-202ENST00000395860 TNP2Q05952 138 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms