RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MAPKAPK5-AS1Q8N8E1 139 aa13.51□□□□□ -0.25
CXXC4-201ENST00000394767 DIRC1Q969H9 104 aa13.51□□□□□ -0.25
CXXC4-201ENST00000394767 GIG44P09565 113 aaPredicted RBP13.51□□□□□ -0.25
CXXC4-201ENST00000394767 USP17L23D6RBM5 183 aa13.5□□□□□ -0.25
CXXC4-201ENST00000394767 HIVEP1P15822 2718 aa13.5□□□□□ -0.25
CXXC4-201ENST00000394767 NTM-AS1Q6ZSK4 140 aa13.5□□□□□ -0.25
CXXC4-201ENST00000394767 CDK2AP2O75956 126 aa13.5□□□□□ -0.25
CXXC4-201ENST00000394767 H3BNG1 76 aa13.49□□□□□ -0.25
CXXC4-201ENST00000394767 COX6A2Q02221 97 aa13.49□□□□□ -0.25
CXXC4-201ENST00000394767 Q8IZM0 81 aa13.49□□□□□ -0.25
CXXC4-201ENST00000394767 H0YGX0 51 aa13.49□□□□□ -0.25
CXXC4-201ENST00000394767 UNQ6190/PRO20217Q6UXQ8 127 aa13.48□□□□□ -0.25
CXXC4-201ENST00000394767 A0A1W2PPM0 123 aa13.48□□□□□ -0.25
CXXC4-201ENST00000394767 C21orf62-AS1Q17RA5 79 aa13.48□□□□□ -0.25
CXXC4-201ENST00000394767 LOC107984640A0A0U1RRK4 108 aa13.47□□□□□ -0.25
CXXC4-201ENST00000394767 AMELXQ99217 191 aa13.47□□□□□ -0.25
CXXC4-201ENST00000394767 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
CXXC4-201ENST00000394767 HIGD2AQ9BW72 106 aa13.47□□□□□ -0.25
CXXC4-201ENST00000394767 LINC00308Q8TCZ7 52 aa13.46□□□□□ -0.25
CXXC4-201ENST00000394767 A0A096LNJ9 63 aa13.46□□□□□ -0.25
CXXC4-201ENST00000394767 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
CXXC4-201ENST00000394767 H3BMG7 143 aa13.45□□□□□ -0.26
CXXC4-201ENST00000394767 LINC01556Q5JQF7 62 aa13.45□□□□□ -0.26
CXXC4-201ENST00000394767 GAGE2AQ6NT46 116 aa13.44□□□□□ -0.26
CXXC4-201ENST00000394767 UBE2V1Q13404 147 aa13.44□□□□□ -0.26
CXXC4-201ENST00000394767 ORMDL1Q9P0S3 153 aa13.44□□□□□ -0.26
CXXC4-201ENST00000394767 C7orf33Q8WU49 177 aa13.44□□□□□ -0.26
CXXC4-201ENST00000394767 LRCOL1A6NCL2 159 aa13.43□□□□□ -0.26
CXXC4-201ENST00000394767 DMDP11532 3685 aa13.42□□□□□ -0.26
CXXC4-201ENST00000394767 DSCR8Q96T75 97 aa13.42□□□□□ -0.26
CXXC4-201ENST00000394767 IGLV5-52A0A0A0MRZ9 124 aa13.42□□□□□ -0.26
CXXC4-201ENST00000394767 FAM19A1Q7Z5A9 133 aa13.41□□□□□ -0.26
CXXC4-201ENST00000394767 C9orf116Q5BN46 136 aaPredicted RBP13.41□□□□□ -0.26
CXXC4-201ENST00000394767 COX7BP24311 80 aa13.41□□□□□ -0.26
CXXC4-201ENST00000394767 BAALC-AS2P0C853 105 aa13.41□□□□□ -0.26
CXXC4-201ENST00000394767 TM2D3Q9BRN9 247 aa13.41□□□□□ -0.26
CXXC4-201ENST00000394767 INAFM2P0DMQ5 153 aa13.4□□□□□ -0.26
CXXC4-201ENST00000394767 IGKV2-28A0A075B6P5 120 aa13.4□□□□□ -0.26
CXXC4-201ENST00000394767 IGKV2D-28P01615 120 aa13.4□□□□□ -0.26
CXXC4-201ENST00000394767 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
CXXC4-201ENST00000394767 SPANXDQ9BXN6 97 aa13.39□□□□□ -0.27
CXXC4-201ENST00000394767 LINC00588Q9Y4M8 146 aa13.39□□□□□ -0.27
CXXC4-201ENST00000394767 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
CXXC4-201ENST00000394767 K7EP34 96 aa13.38□□□□□ -0.27
CXXC4-201ENST00000394767 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
CXXC4-201ENST00000394767 LINC00474Q9P2X8 69 aa13.37□□□□□ -0.27
CXXC4-201ENST00000394767 ETDBQ3ZM63 59 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 TRBV30A0A0K0K1B3 111 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 COX17Q14061 63 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 Q8N3U1 123 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 K7EP13 123 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 TIMM17BO60830 172 aa13.36□□□□□ -0.27
CXXC4-201ENST00000394767 CLEC2BQ92478 149 aa13.35□□□□□ -0.27
CXXC4-201ENST00000394767 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
CXXC4-201ENST00000394767 RPL37AP8A6NKH3 93 aa13.33□□□□□ -0.28
CXXC4-201ENST00000394767 A0A0B4J2C4 111 aa13.32□□□□□ -0.28
CXXC4-201ENST00000394767 M0R378 163 aa13.32□□□□□ -0.28
CXXC4-201ENST00000394767 C4orf48Q5BLP8 95 aa13.31□□□□□ -0.28
CXXC4-201ENST00000394767 NBDYA0A0U1RRE5 68 aa13.31□□□□□ -0.28
CXXC4-201ENST00000394767 NBEAL1Q6ZS30 2694 aa13.31□□□□□ -0.28
CXXC4-201ENST00000394767 F8W1H4 67 aa13.31□□□□□ -0.28
CXXC4-201ENST00000394767 C6orf99Q4VX62 202 aa13.31□□□□□ -0.28
CXXC4-201ENST00000394767 NTN5Q8WTR8 489 aaPredicted RBP13.3□□□□□ -0.28
CXXC4-201ENST00000394767 C9orf153Q5TBE3 101 aa13.3□□□□□ -0.28
CXXC4-201ENST00000394767 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 TSPEAR-AS2P59090 65 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 WIPF1O43516 503 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 LAMA5O15230 3695 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 IGHV3OR16-9A0A0B4J2B5 98 aa13.29□□□□□ -0.28
CXXC4-201ENST00000394767 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
CXXC4-201ENST00000394767 CRYBG3Q68DQ2 2970 aa13.28□□□□□ -0.28
CXXC4-201ENST00000394767 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
CXXC4-201ENST00000394767 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
CXXC4-201ENST00000394767 LINC01620Q4KN68 170 aa13.28□□□□□ -0.28
CXXC4-201ENST00000394767 Q6ZRU5 148 aa13.28□□□□□ -0.28
CXXC4-201ENST00000394767 hADV29S1A0JD25 119 aa13.27□□□□□ -0.28
CXXC4-201ENST00000394767 A0A096LNI7 61 aa13.27□□□□□ -0.28
CXXC4-201ENST00000394767 NDUFC2-KCTD14E9PQ53 114 aa13.26□□□□□ -0.29
CXXC4-201ENST00000394767 M0QXV9 152 aa13.26□□□□□ -0.29
CXXC4-201ENST00000394767 FUSP35637 526 aaKnown RBP eCLIP13.26□□□□□ -0.29
CXXC4-201ENST00000394767 HAMPP81172 84 aa13.26□□□□□ -0.29
CXXC4-201ENST00000394767 OCIAD2Q56VL3 154 aa13.25□□□□□ -0.29
CXXC4-201ENST00000394767 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
CXXC4-201ENST00000394767 UBL5Q9BZL1 73 aa13.25□□□□□ -0.29
CXXC4-201ENST00000394767 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
CXXC4-201ENST00000394767 TAX1BP3O14907 124 aa13.25□□□□□ -0.29
CXXC4-201ENST00000394767 LINC01546A6NGU7 62 aa13.24□□□□□ -0.29
CXXC4-201ENST00000394767 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
CXXC4-201ENST00000394767 LINC00612Q8N6U2 182 aa13.24□□□□□ -0.29
CXXC4-201ENST00000394767 ANKRD29Q8N6D5 301 aa13.24□□□□□ -0.29
CXXC4-201ENST00000394767 C3orf84H3BNL1 204 aa13.23□□□□□ -0.29
CXXC4-201ENST00000394767 FOXI1Q12951 378 aa13.23□□□□□ -0.29
CXXC4-201ENST00000394767 C2orf91Q6ZV80 131 aa13.23□□□□□ -0.29
CXXC4-201ENST00000394767 F8WDY8 70 aa13.22□□□□□ -0.29
CXXC4-201ENST00000394767 H3BQ85 93 aa13.22□□□□□ -0.29
CXXC4-201ENST00000394767 ENHOQ6UWT2 76 aa13.21□□□□□ -0.29
CXXC4-201ENST00000394767 RELNP78509 3460 aa13.21□□□□□ -0.29
CXXC4-201ENST00000394767 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.3
CXXC4-201ENST00000394767 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms