RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IGKV2D-24A0A075B6R9 120 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
TDP1-203ENST00000393454 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 PRKDCP78527 4128 aaKnown RBP5.81□□□□□ -1.48
TDP1-203ENST00000393454 C2orf82Q6UX34 121 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 COX11Q9Y6N1 276 aa5.81□□□□□ -1.48
TDP1-203ENST00000393454 A4D1N5 150 aa5.8□□□□□ -1.48
TDP1-203ENST00000393454 LINC00158P58513 81 aa5.8□□□□□ -1.48
TDP1-203ENST00000393454 SFTA2Q6UW10 78 aa5.8□□□□□ -1.48
TDP1-203ENST00000393454 NAA38Q9BRA0 125 aaKnown RBP5.8□□□□□ -1.48
TDP1-203ENST00000393454 UPK3BQ9BT76 320 aa5.8□□□□□ -1.48
TDP1-203ENST00000393454 PFN2P35080 140 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 SPAG11BQ08648 103 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 KIAA0087Q14695 138 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 H3BUT2 72 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 IFITM1P13164 125 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 CXCL5P42830 114 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 LINC00526Q96FQ7 95 aa5.79□□□□□ -1.48
TDP1-203ENST00000393454 IBA57-AS1B1ANH7 110 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 VAMP3Q15836 100 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 COPS9Q8WXC6 57 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
TDP1-203ENST00000393454 A0A1B0GWB2 263 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 CFC1BP0CG36 223 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 CFC1P0CG37 223 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
TDP1-203ENST00000393454 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
TDP1-203ENST00000393454 EIF4EBP3O60516 100 aaPredicted RBP5.77□□□□□ -1.49
TDP1-203ENST00000393454 RMI2Q96E14 147 aa5.77□□□□□ -1.49
TDP1-203ENST00000393454 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
TDP1-203ENST00000393454 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
TDP1-203ENST00000393454 UNQ6190/PRO20217Q6UXQ8 127 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 PGPEP1Q9NXJ5 209 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 H7C2G1 150 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 C9orf116Q5BN46 136 aaPredicted RBP5.76□□□□□ -1.49
TDP1-203ENST00000393454 SOSTDC1Q6X4U4 206 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 PRO1854Q9UHT4 67 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
TDP1-203ENST00000393454 C10orf25Q5T742 122 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
TDP1-203ENST00000393454 A0A0B4J2C4 111 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 FABP2P12104 132 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
TDP1-203ENST00000393454 CSMD3Q7Z407 3707 aa5.74□□□□□ -1.49
TDP1-203ENST00000393454 TSPAN13O95857 204 aa5.74□□□□□ -1.49
TDP1-203ENST00000393454 Q1RN00 199 aa5.74□□□□□ -1.49
TDP1-203ENST00000393454 COX17Q14061 63 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 PLECQ15149 4684 aaKnown RBP5.73□□□□□ -1.49
TDP1-203ENST00000393454 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 GAGE10A6NGK3 116 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 CASC10Q5T4H9 136 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 SND1-IT1Q9HBX3 110 aa5.73□□□□□ -1.49
TDP1-203ENST00000393454 DNAH7Q8WXX0 4024 aa5.72□□□□□ -1.49
TDP1-203ENST00000393454 PSMB2P49721 201 aa5.72□□□□□ -1.49
TDP1-203ENST00000393454 KRTAP1-5Q9BYS1 174 aa5.72□□□□□ -1.49
TDP1-203ENST00000393454 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
TDP1-203ENST00000393454 SPCS1Q9Y6A9 102 aa5.72□□□□□ -1.49
TDP1-203ENST00000393454 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.49
TDP1-203ENST00000393454 USP17L23D6RBM5 183 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 LECT2O14960 151 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 RPL13AP40429 203 aaKnown RBP5.71□□□□□ -1.49
TDP1-203ENST00000393454 UBE2V1Q13404 147 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 Q6ZRU5 148 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 MUC7Q8TAX7 377 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 C2orf48Q96LS8 159 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 TGP01266 2768 aa5.71□□□□□ -1.49
TDP1-203ENST00000393454 PSCAO43653 123 aa5.71□□□□□ -1.5
TDP1-203ENST00000393454 SCGB1C2P0DMR2 95 aa5.71□□□□□ -1.5
TDP1-203ENST00000393454 LYSTQ99698 3801 aa5.71□□□□□ -1.5
TDP1-203ENST00000393454 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
TDP1-203ENST00000393454 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
TDP1-203ENST00000393454 TTC32Q5I0X7 151 aa5.7□□□□□ -1.5
TDP1-203ENST00000393454 NBDYA0A0U1RRE5 68 aa5.7□□□□□ -1.5
TDP1-203ENST00000393454 K7EP34 96 aa5.7□□□□□ -1.5
TDP1-203ENST00000393454 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
TDP1-203ENST00000393454 STARD9Q9P2P6 4700 aa5.69□□□□□ -1.5
TDP1-203ENST00000393454 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
TDP1-203ENST00000393454 F8WDY8 70 aa5.69□□□□□ -1.5
TDP1-203ENST00000393454 M0R2N4 97 aa5.69□□□□□ -1.5
TDP1-203ENST00000393454 LYRM7Q5U5X0 104 aa5.69□□□□□ -1.5
TDP1-203ENST00000393454 TRAV13-2A0A0B4J235 113 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 OR13C6PQ8NH95 151 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 IGKV2-28A0A075B6P5 120 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 IGKV2D-28P01615 120 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
TDP1-203ENST00000393454 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms