RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PPDPFLQ8WWR9 84 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 SPATA25Q9BR10 227 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 LELP1Q5T871 98 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 CD164L2Q6UWJ8 174 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
TDP1-202ENST00000393452 LST1O00453 97 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 CLPSL2Q6UWE3 100 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 Q8N3U1 123 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 TRBV10-2A0A0K0K1G8 114 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 A0A1B0GV72 72 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 REG3AQ06141 175 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
TDP1-202ENST00000393452 FBN1P35555 2871 aaKnown RBP6.19□□□□□ -1.42
TDP1-202ENST00000393452 ANGP03950 147 aaKnown RBP6.19□□□□□ -1.42
TDP1-202ENST00000393452 HTN3P15516 51 aa6.19□□□□□ -1.42
TDP1-202ENST00000393452 LINC00158P58513 81 aa6.19□□□□□ -1.42
TDP1-202ENST00000393452 CLEC2BQ92478 149 aa6.19□□□□□ -1.42
TDP1-202ENST00000393452 C3orf56Q8N813 242 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
TDP1-202ENST00000393452 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 TRAV13-2A0A0B4J235 113 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 COX7A2LO14548 114 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 CCL18P55774 89 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 STAB1Q9NY15 2570 aa6.18□□□□□ -1.42
TDP1-202ENST00000393452 H3BNG1 76 aa6.17□□□□□ -1.42
TDP1-202ENST00000393452 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
TDP1-202ENST00000393452 H3BT86 120 aa6.17□□□□□ -1.42
TDP1-202ENST00000393452 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
TDP1-202ENST00000393452 RETNQ9HD89 108 aa6.17□□□□□ -1.42
TDP1-202ENST00000393452 PRR34Q9NV39 138 aa6.17□□□□□ -1.42
TDP1-202ENST00000393452 PFN2P35080 140 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 CKS1BP61024 79 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 C2orf82Q6UX34 121 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 CRPP02741 224 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 CXCL5P42830 114 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
TDP1-202ENST00000393452 LYPD5Q6UWN5 251 aa6.16□□□□□ -1.42
TDP1-202ENST00000393452 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.43
TDP1-202ENST00000393452 CDIP1Q9H305 208 aa6.15□□□□□ -1.43
TDP1-202ENST00000393452 COX17Q14061 63 aa6.14□□□□□ -1.43
TDP1-202ENST00000393452 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
TDP1-202ENST00000393452 TRACP01848 142 aa6.14□□□□□ -1.43
TDP1-202ENST00000393452 MALP21145 153 aa6.14□□□□□ -1.43
TDP1-202ENST00000393452 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
TDP1-202ENST00000393452 TEX49A0A1B0GTD5 131 aa6.13□□□□□ -1.43
TDP1-202ENST00000393452 KPRPQ5T749 579 aaPredicted RBP6.13□□□□□ -1.43
TDP1-202ENST00000393452 Q6ZTC4 211 aa6.13□□□□□ -1.43
TDP1-202ENST00000393452 KLK12Q9UKR0 248 aa6.13□□□□□ -1.43
TDP1-202ENST00000393452 UBE2WQ96B02 151 aa6.13□□□□□ -1.43
TDP1-202ENST00000393452 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
TDP1-202ENST00000393452 PKD1L1Q8TDX9 2849 aa6.12□□□□□ -1.43
TDP1-202ENST00000393452 SMIM11BQ8TCY0 68 aa6.12□□□□□ -1.43
TDP1-202ENST00000393452 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
TDP1-202ENST00000393452 DEFB121Q5J5C9 76 aa6.11□□□□□ -1.43
TDP1-202ENST00000393452 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
TDP1-202ENST00000393452 TRAV8-4A0A0B4J246 113 aa6.11□□□□□ -1.43
TDP1-202ENST00000393452 NDUFC2O95298 119 aa6.11□□□□□ -1.43
TDP1-202ENST00000393452 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
TDP1-202ENST00000393452 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 WFDC10BQ8IUB3 73 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 MUC7Q8TAX7 377 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 ANK2Q01484 3957 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 DNAH3Q8TD57 4116 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 COL6A5A8TX70 2615 aa6.1□□□□□ -1.43
TDP1-202ENST00000393452 H0YGX0 51 aa6.09□□□□□ -1.43
TDP1-202ENST00000393452 XGP55808 180 aa6.09□□□□□ -1.43
TDP1-202ENST00000393452 C9orf116Q5BN46 136 aaPredicted RBP6.09□□□□□ -1.43
TDP1-202ENST00000393452 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
TDP1-202ENST00000393452 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
TDP1-202ENST00000393452 NANOS2P60321 138 aaKnown RBP6.08□□□□□ -1.44
TDP1-202ENST00000393452 ESRGQ1W209 222 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 KRTAP26-1Q6PEX3 210 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 C6orf223Q8N319 242 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 C22orf24Q9Y442 160 aa6.08□□□□□ -1.44
TDP1-202ENST00000393452 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 DEFB131BA0A096LNP1 70 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 MDFIQ99750 246 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 A0A087WYN8 130 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
TDP1-202ENST00000393452 FBN3Q75N90 2809 aa6.06□□□□□ -1.44
TDP1-202ENST00000393452 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
TDP1-202ENST00000393452 LINC01556Q5JQF7 62 aa6.06□□□□□ -1.44
TDP1-202ENST00000393452 Q8NDZ9 215 aa6.06□□□□□ -1.44
TDP1-202ENST00000393452 LINC00526Q96FQ7 95 aa6.06□□□□□ -1.44
TDP1-202ENST00000393452 TMEM126AQ9H061 195 aa6.06□□□□□ -1.44
TDP1-202ENST00000393452 TM2D3Q9BRN9 247 aa6.05□□□□□ -1.44
TDP1-202ENST00000393452 Q9HAA7 133 aa6.05□□□□□ -1.44
TDP1-202ENST00000393452 C6orf48Q9UBA6 75 aa6.04□□□□□ -1.44
TDP1-202ENST00000393452 DNAL4O96015 105 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms