RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 K7ERJ3 54 aa11.73□□□□□ -0.53
MBD4-202ENST00000393278 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
MBD4-202ENST00000393278 IBA57-AS1B1ANH7 110 aa11.71□□□□□ -0.53
MBD4-202ENST00000393278 CXCL5P42830 114 aa11.71□□□□□ -0.53
MBD4-202ENST00000393278 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
MBD4-202ENST00000393278 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
MBD4-202ENST00000393278 IFITM1P13164 125 aa11.71□□□□□ -0.54
MBD4-202ENST00000393278 DAND5Q8N907 189 aa11.71□□□□□ -0.54
MBD4-202ENST00000393278 RAB37Q96AX2 223 aa11.71□□□□□ -0.54
MBD4-202ENST00000393278 A0A0U1RRA0 63 aa11.7□□□□□ -0.54
MBD4-202ENST00000393278 A4D1N5 150 aa11.7□□□□□ -0.54
MBD4-202ENST00000393278 CKS1BP61024 79 aa11.7□□□□□ -0.54
MBD4-202ENST00000393278 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
MBD4-202ENST00000393278 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
MBD4-202ENST00000393278 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
MBD4-202ENST00000393278 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 C9orf118A6NHY6 69 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 CFC1P0CG37 223 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 NPC2P61916 151 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 Q9HAA7 133 aa11.68□□□□□ -0.54
MBD4-202ENST00000393278 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
MBD4-202ENST00000393278 UBE2DNLQ8IWF7 75 aa11.67□□□□□ -0.54
MBD4-202ENST00000393278 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
MBD4-202ENST00000393278 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
MBD4-202ENST00000393278 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
MBD4-202ENST00000393278 CSMD3Q7Z407 3707 aa11.66□□□□□ -0.54
MBD4-202ENST00000393278 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
MBD4-202ENST00000393278 LINC00158P58513 81 aa11.65□□□□□ -0.54
MBD4-202ENST00000393278 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
MBD4-202ENST00000393278 A0A0B4J2C4 111 aa11.65□□□□□ -0.55
MBD4-202ENST00000393278 H3BUT2 72 aa11.65□□□□□ -0.55
MBD4-202ENST00000393278 SOSTDC1Q6X4U4 206 aa11.65□□□□□ -0.55
MBD4-202ENST00000393278 C6orf223Q8N319 242 aa11.65□□□□□ -0.55
MBD4-202ENST00000393278 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.55
MBD4-202ENST00000393278 DNAH1Q9P2D7 4330 aa11.64□□□□□ -0.55
MBD4-202ENST00000393278 PFN2P35080 140 aa11.64□□□□□ -0.55
MBD4-202ENST00000393278 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
MBD4-202ENST00000393278 NAA38Q9BRA0 125 aaKnown RBP11.64□□□□□ -0.55
MBD4-202ENST00000393278 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
MBD4-202ENST00000393278 RMI2Q96E14 147 aa11.63□□□□□ -0.55
MBD4-202ENST00000393278 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
MBD4-202ENST00000393278 STARD9Q9P2P6 4700 aa11.62□□□□□ -0.55
MBD4-202ENST00000393278 UNQ6190/PRO20217Q6UXQ8 127 aa11.62□□□□□ -0.55
MBD4-202ENST00000393278 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
MBD4-202ENST00000393278 COX17Q14061 63 aa11.61□□□□□ -0.55
MBD4-202ENST00000393278 HIGD2BQ4VC39 106 aa11.61□□□□□ -0.55
MBD4-202ENST00000393278 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
MBD4-202ENST00000393278 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
MBD4-202ENST00000393278 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
MBD4-202ENST00000393278 VAMP3Q15836 100 aa11.6□□□□□ -0.55
MBD4-202ENST00000393278 KRTAP1-5Q9BYS1 174 aa11.6□□□□□ -0.55
MBD4-202ENST00000393278 A0A1W2PPM0 123 aa11.59□□□□□ -0.55
MBD4-202ENST00000393278 LYSTQ99698 3801 aa11.59□□□□□ -0.55
MBD4-202ENST00000393278 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
MBD4-202ENST00000393278 TSPAN13O95857 204 aa11.59□□□□□ -0.55
MBD4-202ENST00000393278 C9orf116Q5BN46 136 aaPredicted RBP11.59□□□□□ -0.55
MBD4-202ENST00000393278 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
MBD4-202ENST00000393278 CAMK2N2Q96S95 79 aa11.56□□□□□ -0.56
MBD4-202ENST00000393278 C6orf48Q9UBA6 75 aa11.56□□□□□ -0.56
MBD4-202ENST00000393278 F8WDY8 70 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 FABP2P12104 132 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
MBD4-202ENST00000393278 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
MBD4-202ENST00000393278 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
MBD4-202ENST00000393278 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
MBD4-202ENST00000393278 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
MBD4-202ENST00000393278 Q6ZRU5 148 aa11.53□□□□□ -0.56
MBD4-202ENST00000393278 UBE2V1Q13404 147 aa11.52□□□□□ -0.56
MBD4-202ENST00000393278 TGP01266 2768 aa11.52□□□□□ -0.57
MBD4-202ENST00000393278 NBDYA0A0U1RRE5 68 aa11.52□□□□□ -0.57
MBD4-202ENST00000393278 SPCS1Q9Y6A9 102 aa11.52□□□□□ -0.57
MBD4-202ENST00000393278 VPS13DQ5THJ4 4388 aa11.52□□□□□ -0.57
MBD4-202ENST00000393278 H7C2G1 150 aa11.51□□□□□ -0.57
MBD4-202ENST00000393278 K7EP34 96 aa11.51□□□□□ -0.57
MBD4-202ENST00000393278 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
MBD4-202ENST00000393278 GAGE10A6NGK3 116 aa11.5□□□□□ -0.57
MBD4-202ENST00000393278 GTF2H5Q6ZYL4 71 aa11.5□□□□□ -0.57
MBD4-202ENST00000393278 IGKV2-28A0A075B6P5 120 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 IGKV2D-28P01615 120 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 Q1RN00 199 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
MBD4-202ENST00000393278 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
MBD4-202ENST00000393278 LYRM7Q5U5X0 104 aa11.47□□□□□ -0.57
MBD4-202ENST00000393278 LECT2O14960 151 aa11.46□□□□□ -0.57
MBD4-202ENST00000393278 NDUFC2O95298 119 aa11.46□□□□□ -0.57
MBD4-202ENST00000393278 PSMB2P49721 201 aa11.46□□□□□ -0.57
MBD4-202ENST00000393278 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
MBD4-202ENST00000393278 CARD19Q96LW7 228 aa11.46□□□□□ -0.58
MBD4-202ENST00000393278 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
MBD4-202ENST00000393278 PSCAO43653 123 aa11.45□□□□□ -0.58
MBD4-202ENST00000393278 SLPIP03973 132 aa11.45□□□□□ -0.58
MBD4-202ENST00000393278 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
MBD4-202ENST00000393278 DNAH10Q8IVF4 4471 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms