RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
NME1-203ENST00000393196 STPG4Q8N801 248 aa11.89□□□□□ -0.51
NME1-203ENST00000393196 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
NME1-203ENST00000393196 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
NME1-203ENST00000393196 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
NME1-203ENST00000393196 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
NME1-203ENST00000393196 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
NME1-203ENST00000393196 FAT1Q14517 4588 aa11.87□□□□□ -0.51
NME1-203ENST00000393196 SERF1AO75920 110 aa11.87□□□□□ -0.51
NME1-203ENST00000393196 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
NME1-203ENST00000393196 C6orf48Q9UBA6 75 aa11.87□□□□□ -0.51
NME1-203ENST00000393196 F8VRH5 84 aa11.86□□□□□ -0.51
NME1-203ENST00000393196 SCO1O75880 301 aa11.86□□□□□ -0.51
NME1-203ENST00000393196 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
NME1-203ENST00000393196 S100A1P23297 94 aa11.85□□□□□ -0.51
NME1-203ENST00000393196 RPL37AP61513 92 aaKnown RBP11.85□□□□□ -0.51
NME1-203ENST00000393196 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
NME1-203ENST00000393196 COX7B2Q8TF08 81 aa11.85□□□□□ -0.51
NME1-203ENST00000393196 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
NME1-203ENST00000393196 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
NME1-203ENST00000393196 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
NME1-203ENST00000393196 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
NME1-203ENST00000393196 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
NME1-203ENST00000393196 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
NME1-203ENST00000393196 FAM19A2Q8N3H0 131 aa11.83□□□□□ -0.52
NME1-203ENST00000393196 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
NME1-203ENST00000393196 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
NME1-203ENST00000393196 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
NME1-203ENST00000393196 TMEM170BQ5T4T1 132 aa11.81□□□□□ -0.52
NME1-203ENST00000393196 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
NME1-203ENST00000393196 Q6ZRP5 223 aa11.8□□□□□ -0.52
NME1-203ENST00000393196 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
NME1-203ENST00000393196 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 LINC00310P59036 64 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
NME1-203ENST00000393196 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
NME1-203ENST00000393196 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
NME1-203ENST00000393196 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
NME1-203ENST00000393196 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.52
NME1-203ENST00000393196 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
NME1-203ENST00000393196 PLNP26678 52 aa11.75□□□□□ -0.53
NME1-203ENST00000393196 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
NME1-203ENST00000393196 MAP1LC3CQ9BXW4 147 aa11.75□□□□□ -0.53
NME1-203ENST00000393196 A0A1W2PNN7 141 aa11.74□□□□□ -0.53
NME1-203ENST00000393196 FABP4P15090 132 aa11.74□□□□□ -0.53
NME1-203ENST00000393196 ODF1Q14990 250 aa11.74□□□□□ -0.53
NME1-203ENST00000393196 H0Y8G0 127 aa11.73□□□□□ -0.53
NME1-203ENST00000393196 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
NME1-203ENST00000393196 NUPR1O60356 82 aa11.72□□□□□ -0.53
NME1-203ENST00000393196 ATP6V1G1O75348 118 aa11.72□□□□□ -0.53
NME1-203ENST00000393196 DPM2O94777 84 aa11.7□□□□□ -0.54
NME1-203ENST00000393196 PRR3P79522 188 aaKnown RBP11.7□□□□□ -0.54
NME1-203ENST00000393196 COX17Q14061 63 aa11.7□□□□□ -0.54
NME1-203ENST00000393196 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
NME1-203ENST00000393196 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
NME1-203ENST00000393196 M0QXV9 152 aa11.68□□□□□ -0.54
NME1-203ENST00000393196 HERVK_113P61574 105 aa11.68□□□□□ -0.54
NME1-203ENST00000393196 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
NME1-203ENST00000393196 FLG2Q5D862 2391 aaPredicted RBP11.68□□□□□ -0.54
NME1-203ENST00000393196 XAGE1AQ9HD64 81 aa11.67□□□□□ -0.54
NME1-203ENST00000393196 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
NME1-203ENST00000393196 FAM168BA1KXE4 195 aa11.66□□□□□ -0.54
NME1-203ENST00000393196 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
NME1-203ENST00000393196 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
NME1-203ENST00000393196 LINC00587B1AMM8 73 aa11.65□□□□□ -0.54
NME1-203ENST00000393196 IGKCP01834 107 aa11.65□□□□□ -0.54
NME1-203ENST00000393196 HERV-K104P63124 156 aa11.65□□□□□ -0.54
NME1-203ENST00000393196 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
NME1-203ENST00000393196 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.54
NME1-203ENST00000393196 TP73-AS1Q9UF72 201 aa11.65□□□□□ -0.54
NME1-203ENST00000393196 SYS1-DBNDD2H3BUS1 97 aa11.64□□□□□ -0.55
NME1-203ENST00000393196 PLA2G2DQ9UNK4 145 aa11.64□□□□□ -0.55
NME1-203ENST00000393196 DMBT1Q9UGM3 2413 aaPredicted RBP11.63□□□□□ -0.55
NME1-203ENST00000393196 OXTP01178 125 aa11.63□□□□□ -0.55
NME1-203ENST00000393196 PFN2P35080 140 aa11.63□□□□□ -0.55
NME1-203ENST00000393196 UBE2BP63146 152 aa11.63□□□□□ -0.55
NME1-203ENST00000393196 PET117Q6UWS5 81 aa11.63□□□□□ -0.55
NME1-203ENST00000393196 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
NME1-203ENST00000393196 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
NME1-203ENST00000393196 LEPROTO15243 131 aa11.61□□□□□ -0.55
NME1-203ENST00000393196 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
NME1-203ENST00000393196 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
NME1-203ENST00000393196 NMUP48645 174 aa11.6□□□□□ -0.55
NME1-203ENST00000393196 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
NME1-203ENST00000393196 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
NME1-203ENST00000393196 C22orf24Q9Y442 160 aa11.6□□□□□ -0.55
NME1-203ENST00000393196 IGLV5-37A0A075B6J1 123 aa11.59□□□□□ -0.55
NME1-203ENST00000393196 AKR1D1P51857 326 aa11.59□□□□□ -0.55
NME1-203ENST00000393196 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
NME1-203ENST00000393196 SERTAD4-AS1Q5TG53 156 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms