RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
MKS1-203ENST00000393120 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
MKS1-203ENST00000393120 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
MKS1-203ENST00000393120 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
MKS1-203ENST00000393120 H3BNG1 76 aa9.8□□□□□ -0.84
MKS1-203ENST00000393120 ANGP03950 147 aaKnown RBP9.8□□□□□ -0.84
MKS1-203ENST00000393120 COX7A2LO14548 114 aa9.79□□□□□ -0.84
MKS1-203ENST00000393120 HTN3P15516 51 aa9.79□□□□□ -0.84
MKS1-203ENST00000393120 CLPSL2Q6UWE3 100 aa9.79□□□□□ -0.84
MKS1-203ENST00000393120 CHCHD10Q8WYQ3 142 aaPredicted RBP9.79□□□□□ -0.84
MKS1-203ENST00000393120 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
MKS1-203ENST00000393120 H3BT86 120 aa9.78□□□□□ -0.84
MKS1-203ENST00000393120 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
MKS1-203ENST00000393120 F8P00451 2351 aa9.78□□□□□ -0.84
MKS1-203ENST00000393120 CCL18P55774 89 aa9.78□□□□□ -0.84
MKS1-203ENST00000393120 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
MKS1-203ENST00000393120 CXCL5P42830 114 aa9.77□□□□□ -0.85
MKS1-203ENST00000393120 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
MKS1-203ENST00000393120 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
MKS1-203ENST00000393120 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 Q8N3U1 123 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 PRR34Q9NV39 138 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 PFN2P35080 140 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
MKS1-203ENST00000393120 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
MKS1-203ENST00000393120 CRPP02741 224 aa9.75□□□□□ -0.85
MKS1-203ENST00000393120 COX17Q14061 63 aa9.75□□□□□ -0.85
MKS1-203ENST00000393120 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
MKS1-203ENST00000393120 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
MKS1-203ENST00000393120 CKS1BP61024 79 aa9.74□□□□□ -0.85
MKS1-203ENST00000393120 RETNQ9HD89 108 aa9.74□□□□□ -0.85
MKS1-203ENST00000393120 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
MKS1-203ENST00000393120 TRACP01848 142 aa9.73□□□□□ -0.85
MKS1-203ENST00000393120 MALP21145 153 aa9.73□□□□□ -0.85
MKS1-203ENST00000393120 CFAP161Q6P656 301 aa9.73□□□□□ -0.85
MKS1-203ENST00000393120 NTN5Q8WTR8 489 aaPredicted RBP9.73□□□□□ -0.85
MKS1-203ENST00000393120 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
MKS1-203ENST00000393120 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
MKS1-203ENST00000393120 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
MKS1-203ENST00000393120 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.86
MKS1-203ENST00000393120 KPRPQ5T749 579 aaPredicted RBP9.7□□□□□ -0.86
MKS1-203ENST00000393120 ENHOQ6UWT2 76 aa9.7□□□□□ -0.86
MKS1-203ENST00000393120 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
MKS1-203ENST00000393120 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
MKS1-203ENST00000393120 MUC7Q8TAX7 377 aa9.7□□□□□ -0.86
MKS1-203ENST00000393120 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
MKS1-203ENST00000393120 TEX49A0A1B0GTD5 131 aa9.69□□□□□ -0.86
MKS1-203ENST00000393120 SCGB1A1P11684 91 aa9.69□□□□□ -0.86
MKS1-203ENST00000393120 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
MKS1-203ENST00000393120 Q6ZTC4 211 aa9.69□□□□□ -0.86
MKS1-203ENST00000393120 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
MKS1-203ENST00000393120 NDUFC2O95298 119 aa9.68□□□□□ -0.86
MKS1-203ENST00000393120 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
MKS1-203ENST00000393120 H0YGX0 51 aa9.68□□□□□ -0.86
MKS1-203ENST00000393120 A0A0J9YWU9 116 aa9.66□□□□□ -0.86
MKS1-203ENST00000393120 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
MKS1-203ENST00000393120 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
MKS1-203ENST00000393120 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
MKS1-203ENST00000393120 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
MKS1-203ENST00000393120 WFDC10BQ8IUB3 73 aa9.64□□□□□ -0.87
MKS1-203ENST00000393120 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
MKS1-203ENST00000393120 OR13C6PQ8NH95 151 aa9.63□□□□□ -0.87
MKS1-203ENST00000393120 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
MKS1-203ENST00000393120 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
MKS1-203ENST00000393120 NANOS2P60321 138 aaKnown RBP9.62□□□□□ -0.87
MKS1-203ENST00000393120 ESRGQ1W209 222 aa9.62□□□□□ -0.87
MKS1-203ENST00000393120 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
MKS1-203ENST00000393120 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
MKS1-203ENST00000393120 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
MKS1-203ENST00000393120 XGP55808 180 aa9.61□□□□□ -0.87
MKS1-203ENST00000393120 C10orf25Q5T742 122 aa9.61□□□□□ -0.87
MKS1-203ENST00000393120 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
MKS1-203ENST00000393120 C6orf223Q8N319 242 aa9.61□□□□□ -0.87
MKS1-203ENST00000393120 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
MKS1-203ENST00000393120 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
MKS1-203ENST00000393120 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
MKS1-203ENST00000393120 C22orf24Q9Y442 160 aa9.6□□□□□ -0.87
MKS1-203ENST00000393120 A0A087WYN8 130 aa9.58□□□□□ -0.88
MKS1-203ENST00000393120 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
MKS1-203ENST00000393120 A0A1B0GX51 115 aa9.58□□□□□ -0.88
MKS1-203ENST00000393120 DNAL4O96015 105 aa9.58□□□□□ -0.88
MKS1-203ENST00000393120 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
MKS1-203ENST00000393120 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
MKS1-203ENST00000393120 Q9HAA7 133 aa9.57□□□□□ -0.88
MKS1-203ENST00000393120 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
MKS1-203ENST00000393120 ACYP1P07311 99 aa9.56□□□□□ -0.88
MKS1-203ENST00000393120 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
MKS1-203ENST00000393120 TRAV10A0A0B4J240 114 aa9.55□□□□□ -0.88
MKS1-203ENST00000393120 Q8NDZ9 215 aa9.55□□□□□ -0.88
MKS1-203ENST00000393120 STAB1Q9NY15 2570 aa9.55□□□□□ -0.88
MKS1-203ENST00000393120 LECT2O14960 151 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 F8WDY8 70 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
MKS1-203ENST00000393120 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms