RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 SHROOM2Q13796 1616 aa-1.23□□□□□ -2.61
RNU6-550P-201ENST00000391057 ROBO1Q9Y6N7 1651 aa-1.23□□□□□ -2.61
RNU6-550P-201ENST00000391057 EHBP1L1Q8N3D4 1523 aa-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 ITPR3Q14573 2671 aa-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 COX6CP09669 75 aa-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 TSC22D3Q99576 134 aa-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 DPH3P1Q9H4G8 78 aa-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 TEP1Q99973 2627 aaKnown RBP-1.24□□□□□ -2.61
RNU6-550P-201ENST00000391057 A0A0G2JMZ2 1700 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 FAM24AA6NFZ4 105 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 FAM223BA6NKX1 122 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 K7EP13 123 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 ATP5EP56381 51 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 Q0VG73 95 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 SFTA2Q6UW10 78 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 PP6455Q8WZ26 134 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 MXRA5Q9NR99 2828 aa-1.25□□□□□ -2.61
RNU6-550P-201ENST00000391057 H1FX-AS1Q4G0G2 97 aa-1.26□□□□□ -2.61
RNU6-550P-201ENST00000391057 CRIPTQ9P021 101 aa-1.26□□□□□ -2.61
RNU6-550P-201ENST00000391057 ADGRL2O95490 1459 aa-1.26□□□□□ -2.61
RNU6-550P-201ENST00000391057 CCDC141Q6ZP82 1450 aa-1.26□□□□□ -2.61
RNU6-550P-201ENST00000391057 C1orf54Q8WWF1 131 aa-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 LINC00846Q9NV44 126 aa-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 PRO1854Q9UHT4 67 aa-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 A2ML1A8K2U0 1454 aa-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 RNF213Q63HN8 5207 aa-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 USP9YO00507 2555 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-550P-201ENST00000391057 XRN1Q8IZH2 1706 aaKnown RBP-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 QRICH2Q9H0J4 1663 aa-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 UBE2D3P61077 147 aa-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 UBE2D2P62837 147 aa-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 C9orf62Q8N4C0 152 aa-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 C12orf57Q99622 126 aa-1.28□□□□□ -2.61
RNU6-550P-201ENST00000391057 PAPPA2Q9BXP8 1791 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 TGP01266 2768 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 SCAPERQ9BY12 1400 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 A0A1B0GU69 56 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 I3L3M4 83 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 SAA2P0DJI9 122 aaPredicted RBP-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 DEFB112Q30KQ8 113 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 FAM107BQ9H098 131 aa-1.29□□□□□ -2.62
RNU6-550P-201ENST00000391057 PLEKHH2Q8IVE3 1493 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 EPG5Q9HCE0 2579 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 NAP1L6A6NFF2 107 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 SNAPC5O75971 98 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 S100A12P80511 92 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 HECTD1Q9ULT8 2610 aa-1.3□□□□□ -2.62
RNU6-550P-201ENST00000391057 NLRP1Q9C000 1473 aa-1.31□□□□□ -2.62
RNU6-550P-201ENST00000391057 SCN7AQ01118 1682 aa-1.31□□□□□ -2.62
RNU6-550P-201ENST00000391057 MUC17Q685J3 4493 aa-1.31□□□□□ -2.62
RNU6-550P-201ENST00000391057 NKTRP30414 1462 aaKnown RBP-1.31□□□□□ -2.62
RNU6-550P-201ENST00000391057 NBPF19A0A087WUL8 3843 aa-1.32□□□□□ -2.62
RNU6-550P-201ENST00000391057 ZFHX3Q15911 3703 aa-1.32□□□□□ -2.62
RNU6-550P-201ENST00000391057 DIP2CQ9Y2E4 1556 aa-1.33□□□□□ -2.62
RNU6-550P-201ENST00000391057 FASNP49327 2511 aaKnown RBP-1.33□□□□□ -2.62
RNU6-550P-201ENST00000391057 ROCK2O75116 1388 aaKnown RBP-1.34□□□□□ -2.62
RNU6-550P-201ENST00000391057 MRC2Q9UBG0 1479 aa-1.34□□□□□ -2.62
RNU6-550P-201ENST00000391057 SVBPQ8N300 66 aa-1.34□□□□□ -2.62
RNU6-550P-201ENST00000391057 DNAH6Q9C0G6 4158 aa-1.34□□□□□ -2.62
RNU6-550P-201ENST00000391057 NUP188Q5SRE5 1749 aa-1.35□□□□□ -2.62
RNU6-550P-201ENST00000391057 A0A087WVE0 104 aa-1.35□□□□□ -2.63
RNU6-550P-201ENST00000391057 HMGN1P05114 100 aa-1.35□□□□□ -2.63
RNU6-550P-201ENST00000391057 SNCAP37840 140 aa-1.35□□□□□ -2.63
RNU6-550P-201ENST00000391057 C6orf201Q7Z4U5 140 aa-1.35□□□□□ -2.63
RNU6-550P-201ENST00000391057 IER3IP1Q9Y5U9 82 aa-1.35□□□□□ -2.63
RNU6-550P-201ENST00000391057 TOP2BQ02880 1626 aa-1.36□□□□□ -2.63
RNU6-550P-201ENST00000391057 CRYM-AS1A6NIL9 109 aa-1.36□□□□□ -2.63
RNU6-550P-201ENST00000391057 VAMP8Q9BV40 100 aa-1.36□□□□□ -2.63
RNU6-550P-201ENST00000391057 MARF1Q9Y4F3 1742 aaKnown RBP-1.36□□□□□ -2.63
RNU6-550P-201ENST00000391057 MYOM2P54296 1465 aa-1.37□□□□□ -2.63
RNU6-550P-201ENST00000391057 MYO18BQ8IUG5 2567 aa-1.37□□□□□ -2.63
RNU6-550P-201ENST00000391057 CUL7Q14999 1698 aa-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 EDC4Q6P2E9 1401 aaKnown RBP-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 C7orf77A4D0Y5 90 aa-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 H3BQF6 201 aa-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 KRTDAPP60985 99 aa-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 MRPL34Q9BQ48 92 aaKnown RBP-1.38□□□□□ -2.63
RNU6-550P-201ENST00000391057 USP9XQ93008 2570 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-550P-201ENST00000391057 H3BQ15 152 aa-1.39□□□□□ -2.63
RNU6-550P-201ENST00000391057 HEPN1Q6WQI6 88 aa-1.39□□□□□ -2.63
RNU6-550P-201ENST00000391057 PDCD11Q14690 1871 aaKnown RBP-1.39□□□□□ -2.63
RNU6-550P-201ENST00000391057 PKHD1L1Q86WI1 4243 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 A0A0G2JND7 137 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 TMEM262E9PQX1 116 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 H0YGG7 62 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 CCL22O00626 93 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 GNG4P50150 75 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 PPP3R1P63098 170 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 HSD52Q0P140 79 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 RPL13AP3Q6NVV1 102 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 CGREF1Q99674 301 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 DNAH2Q9P225 4427 aa-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 DSPP15924 2871 aaKnown RBP-1.4□□□□□ -2.63
RNU6-550P-201ENST00000391057 TRAV30A0A087WSZ9 112 aa-1.41□□□□□ -2.64
RNU6-550P-201ENST00000391057 H0Y9P7 68 aa-1.41□□□□□ -2.64
RNU6-550P-201ENST00000391057 GNGT1P63211 74 aa-1.41□□□□□ -2.64
RNU6-550P-201ENST00000391057 DNHD1Q96M86 4753 aa-1.42□□□□□ -2.64
RNU6-550P-201ENST00000391057 DEFB107AQ8IZN7 70 aa-1.42□□□□□ -2.64
RNU6-550P-201ENST00000391057 CDKN2A-AS1Q9UH64 79 aa-1.42□□□□□ -2.64
RNU6-550P-201ENST00000391057 SPTBN4Q9H254 2564 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms