RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 NBDYA0A0U1RRE5 68 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 TRBV6-4A0A1B0GX49 114 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 JMJD7-PLA2G4BH0Y9G9 81 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 M0R135 149 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 M0R3E3 92 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 HCRTO43612 131 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 PPYP01298 95 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 ZNF137PP52743 207 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 FDCSPQ8NFU4 85 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 SPRR4Q96PI1 79 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 LINC00846Q9NV44 126 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 R4GMQ9 66 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 ICE1Q9Y2F5 2266 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 KIAA0556O60303 1618 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 LRRC37A3O60309 1634 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 ABCC6O95255 1503 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 F5P12259 2224 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 TNCP24821 2201 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 COL4A1P02462 1669 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 PLCH1Q4KWH8 1693 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 NUP188Q5SRE5 1749 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 ABCA5Q8WWZ7 1642 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 ALKQ9UM73 1620 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 A0A087WTM6 91 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 LINC01549A6NIU2 74 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 IFI6P09912 130 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 RNASE3P12724 160 aaKnown RBP0.87□□□□□ -2.27
TRAV40-201ENST00000390467 KRTAP21-3Q3LHN1 58 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 NCBP2-AS2Q69YL0 99 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 DEFB107AQ8IZN7 70 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 TOMM5Q8N4H5 51 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 WFDC6Q9BQY6 131 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 WFDC10AQ9H1F0 79 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 KLK9Q9UKQ9 250 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 SHPRHQ149N8 1683 aa0.87□□□□□ -2.27
TRAV40-201ENST00000390467 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
TRAV40-201ENST00000390467 LRP6O75581 1613 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 BIVM-ERCC5R4GMW8 1640 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 CPS1P31327 1500 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 EFCAB6Q5THR3 1501 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 KIAA0586Q9BVV6 1533 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 WIZO95785 1651 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 SCN7AQ01118 1682 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 NHSQ6T4R5 1651 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV2-40A0A087WW87 121 aaPredicted RBP0.86□□□□□ -2.27
TRAV40-201ENST00000390467 TRBV30A0A0K0K1B3 111 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 A0A1B0GUT8 65 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 UQCR11O14957 56 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 DNAL4O96015 105 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV2D-40P01614 121 aaPredicted RBP0.86□□□□□ -2.27
TRAV40-201ENST00000390467 SPINK7P58062 85 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 PCOTHQ58A44 107 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 C10orf55Q5SWW7 151 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 C5orf56Q8N8D9 126 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 V9GYV3 84 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 CADP27708 2225 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 ANKRD50Q9ULJ7 1429 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 NESP48681 1621 aa0.86□□□□□ -2.27
TRAV40-201ENST00000390467 COL14A1Q05707 1796 aaKnown RBP0.85□□□□□ -2.27
TRAV40-201ENST00000390467 KNTC1P50748 2209 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 GOLGA4Q13439 2230 aaKnown RBP0.85□□□□□ -2.27
TRAV40-201ENST00000390467 AGLP35573 1532 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 ZMYM4Q5VZL5 1548 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 ZNF831Q5JPB2 1677 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 RREB1Q92766 1687 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 AHCTF1Q8WYP5 2266 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 TRAV21A0A0B4J279 112 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 LCE6AA0A183 80 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 CTXND1A0A1B0GTU2 59 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV2-29A2NJV5 120 aaPredicted RBP0.85□□□□□ -2.27
TRAV40-201ENST00000390467 MGPP08493 103 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 IL9P15248 144 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 FXYD4P59646 89 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 TJP1Q07157 1748 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 FXYD3Q14802 87 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 LINC00322Q6ZN03 302 aaPredicted RBP0.85□□□□□ -2.27
TRAV40-201ENST00000390467 TIAM2Q8IVF5 1701 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 LINC00208Q96KT6 92 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 Q96NJ1 140 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 NMES1Q9C002 83 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 LINC00472Q9H8W2 130 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 CMC2Q9NRP2 79 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 PARP4Q9UKK3 1724 aaKnown RBP0.85□□□□□ -2.27
TRAV40-201ENST00000390467 ASXL3Q9C0F0 2248 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 BCORQ6W2J9 1755 aa0.85□□□□□ -2.27
TRAV40-201ENST00000390467 POLR1AO95602 1720 aaPredicted RBP0.84□□□□□ -2.27
TRAV40-201ENST00000390467 RICTORQ6R327 1708 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 ADGRB2O60241 1585 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
TRAV40-201ENST00000390467 LOC110117498A0A087WWA1 95 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 TRGV4A0A0C4DH28 118 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 H0Y9P7 68 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 H3BRN7 92 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 M0R2N4 97 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 INE1O15225 51 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 NDUFB1O75438 58 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms