RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 WFDC2Q14508 124 aa13.11□□□□□ -0.31
GMDS-201ENST00000380805 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
GMDS-201ENST00000380805 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
GMDS-201ENST00000380805 COX7A2LO14548 114 aa13.1□□□□□ -0.31
GMDS-201ENST00000380805 Q1RN00 199 aa13.1□□□□□ -0.31
GMDS-201ENST00000380805 MEGF8Q7Z7M0 2845 aa13.1□□□□□ -0.31
GMDS-201ENST00000380805 TRIAP1O43715 76 aa13.09□□□□□ -0.31
GMDS-201ENST00000380805 SCGB1C2P0DMR2 95 aa13.09□□□□□ -0.31
GMDS-201ENST00000380805 FOXI1Q12951 378 aa13.09□□□□□ -0.31
GMDS-201ENST00000380805 H7C2G1 150 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 K7EIL1 84 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 KIAA0087Q14695 138 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 C6orf226Q5I0X4 101 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 RPL13AP40429 203 aaKnown RBP13.08□□□□□ -0.32
GMDS-201ENST00000380805 CXCL5P42830 114 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
GMDS-201ENST00000380805 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
GMDS-201ENST00000380805 C11orf45Q8TAV5 145 aa13.07□□□□□ -0.32
GMDS-201ENST00000380805 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
GMDS-201ENST00000380805 M0QXV9 152 aa13.05□□□□□ -0.32
GMDS-201ENST00000380805 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
GMDS-201ENST00000380805 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 COX6CP09669 75 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 LINC00158P58513 81 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
GMDS-201ENST00000380805 ATXN8Q156A1 80 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 MTURNQ8N3F0 131 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 LINC01600Q96MT4 127 aa13.04□□□□□ -0.32
GMDS-201ENST00000380805 DEFB131BA0A096LNP1 70 aa13.03□□□□□ -0.32
GMDS-201ENST00000380805 KLK12Q9UKR0 248 aa13.03□□□□□ -0.32
GMDS-201ENST00000380805 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
GMDS-201ENST00000380805 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
GMDS-201ENST00000380805 TENM3Q9P273 2699 aa13.02□□□□□ -0.32
GMDS-201ENST00000380805 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.32
GMDS-201ENST00000380805 ETDBQ3ZM63 59 aa13.02□□□□□ -0.32
GMDS-201ENST00000380805 MALP21145 153 aa13.02□□□□□ -0.33
GMDS-201ENST00000380805 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
GMDS-201ENST00000380805 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
GMDS-201ENST00000380805 CCL18P55774 89 aa13.01□□□□□ -0.33
GMDS-201ENST00000380805 COX17Q14061 63 aa13.01□□□□□ -0.33
GMDS-201ENST00000380805 WFDC10BQ8IUB3 73 aa13.01□□□□□ -0.33
GMDS-201ENST00000380805 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
GMDS-201ENST00000380805 CKS1BP61024 79 aa13□□□□□ -0.33
GMDS-201ENST00000380805 CFAP161Q6P656 301 aa13□□□□□ -0.33
GMDS-201ENST00000380805 C2orf82Q6UX34 121 aa13□□□□□ -0.33
GMDS-201ENST00000380805 TRAV13-2A0A0B4J235 113 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 ESRGQ1W209 222 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 IGKV2-28A0A075B6P5 120 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 IGKV2D-28P01615 120 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 PFN2P35080 140 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 MRAPQ8TCY5 172 aa12.99□□□□□ -0.33
GMDS-201ENST00000380805 FBN3Q75N90 2809 aa12.98□□□□□ -0.33
GMDS-201ENST00000380805 LST1O00453 97 aa12.98□□□□□ -0.33
GMDS-201ENST00000380805 CRPP02741 224 aa12.97□□□□□ -0.33
GMDS-201ENST00000380805 SLC25A20O43772 301 aa12.96□□□□□ -0.33
GMDS-201ENST00000380805 TEN1Q86WV5 123 aa12.96□□□□□ -0.33
GMDS-201ENST00000380805 LINC00337Q8N6G1 96 aa12.96□□□□□ -0.33
GMDS-201ENST00000380805 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
GMDS-201ENST00000380805 TRAV10A0A0B4J240 114 aa12.96□□□□□ -0.34
GMDS-201ENST00000380805 C9JAW5 83 aa12.96□□□□□ -0.34
GMDS-201ENST00000380805 LINC01556Q5JQF7 62 aa12.96□□□□□ -0.34
GMDS-201ENST00000380805 HUWE1Q7Z6Z7 4374 aaKnown RBP12.96□□□□□ -0.34
GMDS-201ENST00000380805 KRTAP26-1Q6PEX3 210 aa12.95□□□□□ -0.34
GMDS-201ENST00000380805 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
GMDS-201ENST00000380805 DNAH9Q9NYC9 4486 aa12.95□□□□□ -0.34
GMDS-201ENST00000380805 J3QR89 54 aa12.94□□□□□ -0.34
GMDS-201ENST00000380805 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
GMDS-201ENST00000380805 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
GMDS-201ENST00000380805 RNF151Q2KHN1 245 aa12.94□□□□□ -0.34
GMDS-201ENST00000380805 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
GMDS-201ENST00000380805 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
GMDS-201ENST00000380805 CLEC2BQ92478 149 aa12.93□□□□□ -0.34
GMDS-201ENST00000380805 CBY1Q9Y3M2 126 aa12.93□□□□□ -0.34
GMDS-201ENST00000380805 GVQW2A0A096LPI5 108 aaPredicted RBP12.92□□□□□ -0.34
GMDS-201ENST00000380805 NDUFC2O95298 119 aa12.91□□□□□ -0.34
GMDS-201ENST00000380805 ANKRD29Q8N6D5 301 aa12.91□□□□□ -0.34
GMDS-201ENST00000380805 VPS25Q9BRG1 176 aa12.91□□□□□ -0.34
GMDS-201ENST00000380805 H3BT86 120 aa12.9□□□□□ -0.34
GMDS-201ENST00000380805 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.34
GMDS-201ENST00000380805 PPDPFLQ8WWR9 84 aa12.9□□□□□ -0.34
GMDS-201ENST00000380805 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
GMDS-201ENST00000380805 COL7A1Q02388 2944 aa12.88□□□□□ -0.35
GMDS-201ENST00000380805 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
GMDS-201ENST00000380805 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
GMDS-201ENST00000380805 UNQ6190/PRO20217Q6UXQ8 127 aa12.87□□□□□ -0.35
GMDS-201ENST00000380805 C6orf223Q8N319 242 aa12.87□□□□□ -0.35
GMDS-201ENST00000380805 TRACP01848 142 aa12.86□□□□□ -0.35
GMDS-201ENST00000380805 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
GMDS-201ENST00000380805 C9orf116Q5BN46 136 aaPredicted RBP12.85□□□□□ -0.35
GMDS-201ENST00000380805 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
GMDS-201ENST00000380805 C15orf56Q8N910 161 aa12.82□□□□□ -0.36
GMDS-201ENST00000380805 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
GMDS-201ENST00000380805 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
GMDS-201ENST00000380805 C6orf48Q9UBA6 75 aa12.82□□□□□ -0.36
GMDS-201ENST00000380805 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
GMDS-201ENST00000380805 F8WDY8 70 aa12.81□□□□□ -0.36
GMDS-201ENST00000380805 C2orf48Q96LS8 159 aa12.81□□□□□ -0.36
GMDS-201ENST00000380805 FAM218AQ96MZ4 157 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms