RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 AVPP01185 164 aa8.95□□□□□ -0.98
CHD3-203ENST00000380358 COX17Q14061 63 aa8.94□□□□□ -0.98
CHD3-203ENST00000380358 TTC28Q96AY4 2481 aa8.94□□□□□ -0.98
CHD3-203ENST00000380358 Q8N814 137 aa8.94□□□□□ -0.98
CHD3-203ENST00000380358 C11orf21Q9P2W6 132 aa8.94□□□□□ -0.98
CHD3-203ENST00000380358 Q8IZM0 81 aa8.93□□□□□ -0.98
CHD3-203ENST00000380358 ALPK3Q96L96 1907 aa8.93□□□□□ -0.98
CHD3-203ENST00000380358 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
CHD3-203ENST00000380358 COX7CP15954 63 aa8.92□□□□□ -0.98
CHD3-203ENST00000380358 ACYP2P14621 99 aa8.92□□□□□ -0.98
CHD3-203ENST00000380358 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
CHD3-203ENST00000380358 FSTL3O95633 263 aa8.92□□□□□ -0.98
CHD3-203ENST00000380358 NRACQ8N912 160 aa8.91□□□□□ -0.98
CHD3-203ENST00000380358 MDFIQ99750 246 aa8.91□□□□□ -0.98
CHD3-203ENST00000380358 KIAA1549LQ6ZVL6 1849 aa8.91□□□□□ -0.98
CHD3-203ENST00000380358 C11orf71Q6IPW1 123 aa8.91□□□□□ -0.98
CHD3-203ENST00000380358 A0A1B0GU69 56 aa8.91□□□□□ -0.98
CHD3-203ENST00000380358 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
CHD3-203ENST00000380358 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.98
CHD3-203ENST00000380358 C16orf90A8MZG2 172 aa8.9□□□□□ -0.98
CHD3-203ENST00000380358 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.99
CHD3-203ENST00000380358 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
CHD3-203ENST00000380358 Q8N3U1 123 aa8.89□□□□□ -0.99
CHD3-203ENST00000380358 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
CHD3-203ENST00000380358 C1orf64Q8NEQ6 169 aa8.89□□□□□ -0.99
CHD3-203ENST00000380358 Q6ZRU5 148 aa8.88□□□□□ -0.99
CHD3-203ENST00000380358 EGFEM1PQ0D2K5 195 aa8.87□□□□□ -0.99
CHD3-203ENST00000380358 MYO18BQ8IUG5 2567 aa8.87□□□□□ -0.99
CHD3-203ENST00000380358 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
CHD3-203ENST00000380358 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
CHD3-203ENST00000380358 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 FHL2Q14192 279 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
CHD3-203ENST00000380358 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 APLNQ9ULZ1 77 aa8.85□□□□□ -0.99
CHD3-203ENST00000380358 Q96NJ1 140 aa8.84□□□□□ -0.99
CHD3-203ENST00000380358 Q6ZSN1 163 aa8.84□□□□□ -0.99
CHD3-203ENST00000380358 Q6ZPA2 131 aa8.83□□□□□ -1
CHD3-203ENST00000380358 SMIM29Q86T20 159 aa8.83□□□□□ -1
CHD3-203ENST00000380358 Q6JHZ5 121 aa8.82□□□□□ -1
CHD3-203ENST00000380358 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
CHD3-203ENST00000380358 CACNA1AO00555 2505 aa8.82□□□□□ -1
CHD3-203ENST00000380358 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
CHD3-203ENST00000380358 ACACBO00763 2458 aa8.82□□□□□ -1
CHD3-203ENST00000380358 KLLNB2CW77 178 aa8.82□□□□□ -1
CHD3-203ENST00000380358 KIAA0087Q14695 138 aa8.81□□□□□ -1
CHD3-203ENST00000380358 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
CHD3-203ENST00000380358 IGLV1-40P01703 118 aa8.81□□□□□ -1
CHD3-203ENST00000380358 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
CHD3-203ENST00000380358 LINC01554Q52M75 96 aa8.8□□□□□ -1
CHD3-203ENST00000380358 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
CHD3-203ENST00000380358 FHL3Q13643 280 aa8.79□□□□□ -1
CHD3-203ENST00000380358 LRP4O75096 1905 aa8.79□□□□□ -1
CHD3-203ENST00000380358 C2orf91Q6ZV80 131 aa8.79□□□□□ -1
CHD3-203ENST00000380358 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
CHD3-203ENST00000380358 IMUPQ9GZP8 106 aa8.79□□□□□ -1
CHD3-203ENST00000380358 TSPEAR-AS2P59090 65 aa8.79□□□□□ -1
CHD3-203ENST00000380358 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
CHD3-203ENST00000380358 C9orf92A6NGG3 77 aa8.78□□□□□ -1
CHD3-203ENST00000380358 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
CHD3-203ENST00000380358 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
CHD3-203ENST00000380358 LINC00313P59037 77 aa8.77□□□□□ -1.01
CHD3-203ENST00000380358 IGLV1-51P01701 117 aa8.77□□□□□ -1.01
CHD3-203ENST00000380358 P0C879 139 aa8.77□□□□□ -1.01
CHD3-203ENST00000380358 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
CHD3-203ENST00000380358 C11orf1Q9H5F2 150 aa8.76□□□□□ -1.01
CHD3-203ENST00000380358 MYO9AB2RTY4 2548 aa8.76□□□□□ -1.01
CHD3-203ENST00000380358 C2CD3Q4AC94 2353 aa8.75□□□□□ -1.01
CHD3-203ENST00000380358 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
CHD3-203ENST00000380358 RTL8CO15255 209 aa8.74□□□□□ -1.01
CHD3-203ENST00000380358 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
CHD3-203ENST00000380358 LINC00574Q9H8X3 128 aa8.72□□□□□ -1.01
CHD3-203ENST00000380358 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
CHD3-203ENST00000380358 Q8N6K4 173 aa8.72□□□□□ -1.01
CHD3-203ENST00000380358 PTPRSQ13332 1948 aa8.72□□□□□ -1.01
CHD3-203ENST00000380358 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.02
CHD3-203ENST00000380358 EIF4EBP1Q13541 118 aaPredicted RBP8.71□□□□□ -1.02
CHD3-203ENST00000380358 IGLV6-57P01721 117 aa8.71□□□□□ -1.02
CHD3-203ENST00000380358 LINC00167Q96N53 147 aa8.7□□□□□ -1.02
CHD3-203ENST00000380358 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
CHD3-203ENST00000380358 MUC7Q8TAX7 377 aa8.69□□□□□ -1.02
CHD3-203ENST00000380358 LINC00315P59091 139 aa8.69□□□□□ -1.02
CHD3-203ENST00000380358 F8P00451 2351 aa8.68□□□□□ -1.02
CHD3-203ENST00000380358 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
CHD3-203ENST00000380358 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
CHD3-203ENST00000380358 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
CHD3-203ENST00000380358 LRRK2Q5S007 2527 aa8.67□□□□□ -1.02
CHD3-203ENST00000380358 ST20-AS1Q8NBB2 130 aa8.66□□□□□ -1.02
CHD3-203ENST00000380358 Q8N2B8 174 aa8.66□□□□□ -1.02
CHD3-203ENST00000380358 PIEZO2Q9H5I5 2752 aa8.66□□□□□ -1.02
CHD3-203ENST00000380358 COL4A4P53420 1690 aaPredicted RBP8.66□□□□□ -1.02
CHD3-203ENST00000380358 A0A0D9SG42 100 aa8.65□□□□□ -1.03
CHD3-203ENST00000380358 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.03
CHD3-203ENST00000380358 TLN1Q9Y490 2541 aaKnown RBP8.64□□□□□ -1.03
CHD3-203ENST00000380358 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
CHD3-203ENST00000380358 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
CHD3-203ENST00000380358 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms