RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 SMCO4Q9NRQ5 59 aa7□□□□□ -1.29
TROAP-202ENST00000380327 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
TROAP-202ENST00000380327 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
TROAP-202ENST00000380327 C2orf82Q6UX34 121 aa6.99□□□□□ -1.29
TROAP-202ENST00000380327 FA2HQ7L5A8 372 aa6.99□□□□□ -1.29
TROAP-202ENST00000380327 ALKBH7Q9BT30 221 aaPredicted RBP6.99□□□□□ -1.29
TROAP-202ENST00000380327 LPAP08519 4548 aa6.99□□□□□ -1.29
TROAP-202ENST00000380327 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
TROAP-202ENST00000380327 PACRGQ96M98 296 aaPredicted RBP6.98□□□□□ -1.29
TROAP-202ENST00000380327 TRAPPC1Q9Y5R8 145 aa6.98□□□□□ -1.29
TROAP-202ENST00000380327 UBE2D1P51668 147 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 SEC11AP67812 179 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
TROAP-202ENST00000380327 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
TROAP-202ENST00000380327 IGIPA6NJ69 53 aa6.96□□□□□ -1.3
TROAP-202ENST00000380327 PRSS2P07478 247 aa6.96□□□□□ -1.3
TROAP-202ENST00000380327 C9orf129Q5T035 196 aaKnown RBP6.96□□□□□ -1.3
TROAP-202ENST00000380327 ERASQ7Z444 233 aa6.96□□□□□ -1.3
TROAP-202ENST00000380327 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
TROAP-202ENST00000380327 RAB5BP61020 215 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 CKS1BP61024 79 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 AMELXQ99217 191 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
TROAP-202ENST00000380327 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
TROAP-202ENST00000380327 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
TROAP-202ENST00000380327 GEMIN7Q9H840 131 aaKnown RBP6.94□□□□□ -1.3
TROAP-202ENST00000380327 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
TROAP-202ENST00000380327 HERVK_113P63121 156 aa6.93□□□□□ -1.3
TROAP-202ENST00000380327 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
TROAP-202ENST00000380327 LINC00614P0C842 121 aa6.92□□□□□ -1.3
TROAP-202ENST00000380327 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
TROAP-202ENST00000380327 Q8IZM0 81 aa6.92□□□□□ -1.3
TROAP-202ENST00000380327 FAM19A3Q7Z5A8 133 aa6.91□□□□□ -1.3
TROAP-202ENST00000380327 C18orf32Q8TCD1 76 aa6.91□□□□□ -1.3
TROAP-202ENST00000380327 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
TROAP-202ENST00000380327 F8VRH5 84 aa6.9□□□□□ -1.3
TROAP-202ENST00000380327 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.3
TROAP-202ENST00000380327 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
TROAP-202ENST00000380327 NUPR1O60356 82 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 ZNF861PO60384 105 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 HBDP02042 147 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 PMVKQ15126 192 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 PRR4Q16378 134 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
TROAP-202ENST00000380327 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 C22orf24Q9Y442 160 aa6.89□□□□□ -1.31
TROAP-202ENST00000380327 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
TROAP-202ENST00000380327 ATP5LO75964 103 aa6.88□□□□□ -1.31
TROAP-202ENST00000380327 NDUFA6P56556 154 aa6.88□□□□□ -1.31
TROAP-202ENST00000380327 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
TROAP-202ENST00000380327 H3BRM9 83 aa6.87□□□□□ -1.31
TROAP-202ENST00000380327 CXCL5P42830 114 aa6.87□□□□□ -1.31
TROAP-202ENST00000380327 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
TROAP-202ENST00000380327 CBLN2Q8IUK8 224 aa6.87□□□□□ -1.31
TROAP-202ENST00000380327 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
TROAP-202ENST00000380327 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
TROAP-202ENST00000380327 MUC2Q02817 5179 aa6.86□□□□□ -1.31
TROAP-202ENST00000380327 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
TROAP-202ENST00000380327 BCE1O60756 84 aa6.85□□□□□ -1.31
TROAP-202ENST00000380327 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
TROAP-202ENST00000380327 PDZD11Q5EBL8 140 aa6.85□□□□□ -1.31
TROAP-202ENST00000380327 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
TROAP-202ENST00000380327 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
TROAP-202ENST00000380327 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
TROAP-202ENST00000380327 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
TROAP-202ENST00000380327 URB1-AS1Q96HZ7 61 aa6.84□□□□□ -1.31
TROAP-202ENST00000380327 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
TROAP-202ENST00000380327 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
TROAP-202ENST00000380327 HSBP1O75506 76 aa6.83□□□□□ -1.32
TROAP-202ENST00000380327 A0A087X002 238 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 A0A096LNJ9 63 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 TSPAN13O95857 204 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 TRGC2P03986 189 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 IGLC3P0DOY3 106 aa6.82□□□□□ -1.32
TROAP-202ENST00000380327 CRYGAP11844 174 aa6.81□□□□□ -1.32
TROAP-202ENST00000380327 NKAPP1Q8N9T2 125 aa6.81□□□□□ -1.32
TROAP-202ENST00000380327 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
TROAP-202ENST00000380327 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
TROAP-202ENST00000380327 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
TROAP-202ENST00000380327 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
TROAP-202ENST00000380327 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
TROAP-202ENST00000380327 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
TROAP-202ENST00000380327 UBE2AP49459 152 aa6.79□□□□□ -1.32
TROAP-202ENST00000380327 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
TROAP-202ENST00000380327 SFTA2Q6UW10 78 aa6.79□□□□□ -1.32
TROAP-202ENST00000380327 IGKV2-28A0A075B6P5 120 aa6.78□□□□□ -1.32
TROAP-202ENST00000380327 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
TROAP-202ENST00000380327 COLCA2A8K830 154 aa6.78□□□□□ -1.32
TROAP-202ENST00000380327 IGKV2D-28P01615 120 aa6.78□□□□□ -1.32
TROAP-202ENST00000380327 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
TROAP-202ENST00000380327 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
TROAP-202ENST00000380327 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms