RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 LELP1Q5T871 98 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 LINC00242Q5T6M2 205 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 TRACP01848 142 aa10.12□□□□□ -0.79
SHROOM1-203ENST00000378679 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
SHROOM1-203ENST00000378679 H0YGX0 51 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 F8WEM9 126 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 NCR3O14931 201 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 UBR5O95071 2799 aaPredicted RBP10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 UBE2BP63146 152 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
SHROOM1-203ENST00000378679 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
SHROOM1-203ENST00000378679 IGLV4-69A0A075B6H9 119 aa10.1□□□□□ -0.79
SHROOM1-203ENST00000378679 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
SHROOM1-203ENST00000378679 IGLV4-60A0A075B6I1 120 aa10.1□□□□□ -0.79
SHROOM1-203ENST00000378679 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
SHROOM1-203ENST00000378679 Q6ZTC4 211 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 Q9UF83 564 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 LECT2O14960 151 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 KRTAP24-1Q3LI83 254 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 HRNRQ86YZ3 2850 aaPredicted RBP10.09□□□□□ -0.79
SHROOM1-203ENST00000378679 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
SHROOM1-203ENST00000378679 H3BT86 120 aa10.08□□□□□ -0.8
SHROOM1-203ENST00000378679 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
SHROOM1-203ENST00000378679 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
SHROOM1-203ENST00000378679 ITPR2Q14571 2701 aa10.07□□□□□ -0.8
SHROOM1-203ENST00000378679 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
SHROOM1-203ENST00000378679 ORMDL1Q9P0S3 153 aa10.07□□□□□ -0.8
SHROOM1-203ENST00000378679 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
SHROOM1-203ENST00000378679 SLPIP03973 132 aa10.06□□□□□ -0.8
SHROOM1-203ENST00000378679 AMELXQ99217 191 aa10.06□□□□□ -0.8
SHROOM1-203ENST00000378679 hADV29S1A0JD25 119 aa10.06□□□□□ -0.8
SHROOM1-203ENST00000378679 DEFB105AQ8NG35 78 aa10.05□□□□□ -0.8
SHROOM1-203ENST00000378679 IL17DQ8TAD2 202 aa10.05□□□□□ -0.8
SHROOM1-203ENST00000378679 COX6A2Q02221 97 aa10.04□□□□□ -0.8
SHROOM1-203ENST00000378679 CSDC2Q9Y534 153 aaKnown RBP10.04□□□□□ -0.8
SHROOM1-203ENST00000378679 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
SHROOM1-203ENST00000378679 SMIM1B2RUZ4 78 aa10.04□□□□□ -0.8
SHROOM1-203ENST00000378679 UBL5Q9BZL1 73 aa10.03□□□□□ -0.8
SHROOM1-203ENST00000378679 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
SHROOM1-203ENST00000378679 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
SHROOM1-203ENST00000378679 KRTAP1-1Q07627 177 aa10.02□□□□□ -0.8
SHROOM1-203ENST00000378679 TIMM17BO60830 172 aa10.02□□□□□ -0.81
SHROOM1-203ENST00000378679 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
SHROOM1-203ENST00000378679 DIRC1Q969H9 104 aa10.01□□□□□ -0.81
SHROOM1-203ENST00000378679 CELA1Q9UNI1 258 aa10□□□□□ -0.81
SHROOM1-203ENST00000378679 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
SHROOM1-203ENST00000378679 PRO0461Q9UI25 63 aa10□□□□□ -0.81
SHROOM1-203ENST00000378679 J3KT08 172 aa10□□□□□ -0.81
SHROOM1-203ENST00000378679 RBM3P98179 157 aaKnown RBP9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 LINC00643Q86TS7 51 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 SPANXDQ9BXN6 97 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 NF1P21359 2839 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 BAHCC1Q9P281 2608 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 A0A087WZ39 114 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 X6R8D5 127 aa9.99□□□□□ -0.81
SHROOM1-203ENST00000378679 ACYP1P07311 99 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 LINC01546A6NGU7 62 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 ATOX1O00244 68 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 TRBV30A0A0K0K1B3 111 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 Q8IZM0 81 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 C20orf197Q8N268 126 aa9.98□□□□□ -0.81
SHROOM1-203ENST00000378679 M0QXV9 152 aa9.97□□□□□ -0.81
SHROOM1-203ENST00000378679 CYSRT1A8MQ03 144 aa9.97□□□□□ -0.81
SHROOM1-203ENST00000378679 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
SHROOM1-203ENST00000378679 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
SHROOM1-203ENST00000378679 A0A087WVE0 104 aa9.96□□□□□ -0.82
SHROOM1-203ENST00000378679 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
SHROOM1-203ENST00000378679 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
SHROOM1-203ENST00000378679 LST1O00453 97 aa9.95□□□□□ -0.82
SHROOM1-203ENST00000378679 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
SHROOM1-203ENST00000378679 FBN2P35556 2912 aa9.95□□□□□ -0.82
SHROOM1-203ENST00000378679 C6orf99Q4VX62 202 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 WFDC10BQ8IUB3 73 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 CELSR2Q9HCU4 2923 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 A8MTW9 85 aa9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 C9orf116Q5BN46 136 aaPredicted RBP9.94□□□□□ -0.82
SHROOM1-203ENST00000378679 UQCRQO14949 82 aa9.93□□□□□ -0.82
SHROOM1-203ENST00000378679 COX7BP24311 80 aa9.93□□□□□ -0.82
SHROOM1-203ENST00000378679 M0R2N4 97 aa9.93□□□□□ -0.82
SHROOM1-203ENST00000378679 KRTAP10-3P60369 221 aa9.93□□□□□ -0.82
SHROOM1-203ENST00000378679 SCXQ7RTU7 201 aa9.92□□□□□ -0.82
SHROOM1-203ENST00000378679 C3orf22Q8N5N4 141 aa9.92□□□□□ -0.82
SHROOM1-203ENST00000378679 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
SHROOM1-203ENST00000378679 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
SHROOM1-203ENST00000378679 TMEM256-PLSCR3K7ERE1 68 aa9.9□□□□□ -0.83
SHROOM1-203ENST00000378679 JMJD7-PLA2G4BH0Y9G9 81 aa9.89□□□□□ -0.83
SHROOM1-203ENST00000378679 C5orf47Q569G3 176 aa9.89□□□□□ -0.83
SHROOM1-203ENST00000378679 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms