RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 PLAC8Q9NZF1 115 aa13.82□□□□□ -0.2
GFRA3-202ENST00000378362 LRP1Q07954 4544 aaKnown RBP13.81□□□□□ -0.2
GFRA3-202ENST00000378362 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
GFRA3-202ENST00000378362 HSBP1O75506 76 aa13.81□□□□□ -0.2
GFRA3-202ENST00000378362 PLA2G1BP04054 148 aaKnown RBP13.8□□□□□ -0.2
GFRA3-202ENST00000378362 KRTAP10-4P60372 401 aaPredicted RBP13.8□□□□□ -0.2
GFRA3-202ENST00000378362 LINC01561Q8N1V8 128 aa13.8□□□□□ -0.2
GFRA3-202ENST00000378362 Q6ZRP5 223 aa13.8□□□□□ -0.2
GFRA3-202ENST00000378362 ATP5LO75964 103 aa13.79□□□□□ -0.2
GFRA3-202ENST00000378362 GAGE2EQ4V326 116 aa13.79□□□□□ -0.2
GFRA3-202ENST00000378362 GAGE2DQ9UEU5 116 aa13.79□□□□□ -0.2
GFRA3-202ENST00000378362 IGLV5-45A0A087WSX0 123 aa13.78□□□□□ -0.2
GFRA3-202ENST00000378362 A0A1W2PNN7 141 aa13.78□□□□□ -0.2
GFRA3-202ENST00000378362 CKS1BP61024 79 aa13.78□□□□□ -0.2
GFRA3-202ENST00000378362 RPL37AP61513 92 aaKnown RBP13.78□□□□□ -0.2
GFRA3-202ENST00000378362 H0Y8G0 127 aa13.77□□□□□ -0.21
GFRA3-202ENST00000378362 IGLC3P0DOY3 106 aa13.77□□□□□ -0.21
GFRA3-202ENST00000378362 Q8IZM0 81 aa13.77□□□□□ -0.21
GFRA3-202ENST00000378362 IFI27L1Q96BM0 104 aa13.77□□□□□ -0.21
GFRA3-202ENST00000378362 PKHD1L1Q86WI1 4243 aa13.77□□□□□ -0.21
GFRA3-202ENST00000378362 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
GFRA3-202ENST00000378362 RNF151Q2KHN1 245 aa13.76□□□□□ -0.21
GFRA3-202ENST00000378362 DMBT1Q9UGM3 2413 aaPredicted RBP13.76□□□□□ -0.21
GFRA3-202ENST00000378362 FAM168BA1KXE4 195 aa13.76□□□□□ -0.21
GFRA3-202ENST00000378362 ZNF22P17026 224 aaPredicted RBP13.76□□□□□ -0.21
GFRA3-202ENST00000378362 LINC00474Q9P2X8 69 aa13.76□□□□□ -0.21
GFRA3-202ENST00000378362 F8WDY8 70 aa13.74□□□□□ -0.21
GFRA3-202ENST00000378362 FABP4P15090 132 aa13.74□□□□□ -0.21
GFRA3-202ENST00000378362 COX7B2Q8TF08 81 aa13.74□□□□□ -0.21
GFRA3-202ENST00000378362 CHTOPQ9Y3Y2 248 aaKnown RBP13.74□□□□□ -0.21
GFRA3-202ENST00000378362 HNRNPA3P51991 378 aaKnown RBP13.74□□□□□ -0.21
GFRA3-202ENST00000378362 HERC1Q15751 4861 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 TRBV30A0A0K0K1B3 111 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BKO60814 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BJP06899 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BOP23527 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BBP33778 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BDP58876 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BCP62807 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST2H2BEQ16778 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.72□□□□□ -0.21
GFRA3-202ENST00000378362 TMEM170BQ5T4T1 132 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BHQ93079 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BNQ99877 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 HIST1H2BMQ99879 126 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 PKIGQ9Y2B9 76 aa13.72□□□□□ -0.21
GFRA3-202ENST00000378362 H3BRM9 83 aa13.71□□□□□ -0.22
GFRA3-202ENST00000378362 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
GFRA3-202ENST00000378362 FAT3Q8TDW7 4589 aa13.7□□□□□ -0.22
GFRA3-202ENST00000378362 F8VRH5 84 aa13.69□□□□□ -0.22
GFRA3-202ENST00000378362 TLX1NBP0CAT3 122 aa13.69□□□□□ -0.22
GFRA3-202ENST00000378362 NDUFC2-KCTD14E9PQ53 114 aa13.69□□□□□ -0.22
GFRA3-202ENST00000378362 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
GFRA3-202ENST00000378362 FAM19A5Q7Z5A7 132 aaPredicted RBP13.68□□□□□ -0.22
GFRA3-202ENST00000378362 C7orf33Q8WU49 177 aa13.68□□□□□ -0.22
GFRA3-202ENST00000378362 XAGE1AQ9HD64 81 aa13.68□□□□□ -0.22
GFRA3-202ENST00000378362 C9orf129Q5T035 196 aaKnown RBP13.67□□□□□ -0.22
GFRA3-202ENST00000378362 KRTAP7-1Q8IUC3 87 aa13.67□□□□□ -0.22
GFRA3-202ENST00000378362 TRAV12-1A0A0B4J245 112 aa13.67□□□□□ -0.22
GFRA3-202ENST00000378362 IGLV5-39A0A0G2JS06 123 aa13.67□□□□□ -0.22
GFRA3-202ENST00000378362 PMCHL2Q9BQD1 86 aa13.66□□□□□ -0.22
GFRA3-202ENST00000378362 LOC105371267A0A1B0GV96 52 aa13.64□□□□□ -0.23
GFRA3-202ENST00000378362 ZNF625Q96I27 306 aaPredicted RBP13.64□□□□□ -0.23
GFRA3-202ENST00000378362 ODF1Q14990 250 aa13.64□□□□□ -0.23
GFRA3-202ENST00000378362 CXCL5P42830 114 aa13.63□□□□□ -0.23
GFRA3-202ENST00000378362 KRTAP11-1Q8IUC1 163 aa13.61□□□□□ -0.23
GFRA3-202ENST00000378362 TMEM223A0PJW6 202 aa13.6□□□□□ -0.23
GFRA3-202ENST00000378362 PFN2P35080 140 aa13.6□□□□□ -0.23
GFRA3-202ENST00000378362 PRR3P79522 188 aaKnown RBP13.6□□□□□ -0.23
GFRA3-202ENST00000378362 SERTAD4-AS1Q5TG53 156 aa13.6□□□□□ -0.23
GFRA3-202ENST00000378362 HSPB8Q9UJY1 196 aa13.6□□□□□ -0.23
GFRA3-202ENST00000378362 TMA7Q9Y2S6 64 aaKnown RBP13.57□□□□□ -0.24
GFRA3-202ENST00000378362 M0QXV9 152 aa13.56□□□□□ -0.24
GFRA3-202ENST00000378362 PSORS1C2Q9UIG4 136 aa13.56□□□□□ -0.24
GFRA3-202ENST00000378362 A0A0U1RRA0 63 aa13.54□□□□□ -0.24
GFRA3-202ENST00000378362 MAP1LC3CQ9BXW4 147 aa13.54□□□□□ -0.24
GFRA3-202ENST00000378362 CTAG1AP78358 180 aa13.52□□□□□ -0.25
GFRA3-202ENST00000378362 ERG28Q9UKR5 140 aa13.52□□□□□ -0.25
GFRA3-202ENST00000378362 C22orf24Q9Y442 160 aa13.51□□□□□ -0.25
GFRA3-202ENST00000378362 DPM2O94777 84 aa13.5□□□□□ -0.25
GFRA3-202ENST00000378362 TSPEAR-AS2P59090 65 aa13.5□□□□□ -0.25
GFRA3-202ENST00000378362 C1orf137Q5JT78 98 aa13.5□□□□□ -0.25
GFRA3-202ENST00000378362 UBE2BP63146 152 aa13.5□□□□□ -0.25
GFRA3-202ENST00000378362 IGKCP01834 107 aa13.49□□□□□ -0.25
GFRA3-202ENST00000378362 SYS1-DBNDD2H3BUS1 97 aa13.48□□□□□ -0.25
GFRA3-202ENST00000378362 J3QL48 77 aa13.48□□□□□ -0.25
GFRA3-202ENST00000378362 PLNP26678 52 aa13.48□□□□□ -0.25
GFRA3-202ENST00000378362 GAGE10A6NGK3 116 aa13.47□□□□□ -0.25
GFRA3-202ENST00000378362 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
GFRA3-202ENST00000378362 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
GFRA3-202ENST00000378362 LINC00158P58513 81 aa13.46□□□□□ -0.25
GFRA3-202ENST00000378362 TNXBP22105 4242 aa13.46□□□□□ -0.25
GFRA3-202ENST00000378362 NDUFA12Q9UI09 145 aa13.45□□□□□ -0.26
GFRA3-202ENST00000378362 RPL37AP8A6NKH3 93 aa13.44□□□□□ -0.26
GFRA3-202ENST00000378362 KRTAP29-1A8MX34 341 aaPredicted RBP13.44□□□□□ -0.26
GFRA3-202ENST00000378362 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
GFRA3-202ENST00000378362 Q8NDZ9 215 aa13.44□□□□□ -0.26
GFRA3-202ENST00000378362 C3orf79P0CE67 100 aa13.43□□□□□ -0.26
GFRA3-202ENST00000378362 KRTDAPP60985 99 aa13.43□□□□□ -0.26
GFRA3-202ENST00000378362 SRSF9Q13242 221 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms