RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
PCDHA1-201ENST00000378133 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.53
PCDHA1-201ENST00000378133 UNC79Q9P2D8 2635 aa11.71□□□□□ -0.53
PCDHA1-201ENST00000378133 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.53
PCDHA1-201ENST00000378133 ITPR2Q14571 2701 aa11.71□□□□□ -0.53
PCDHA1-201ENST00000378133 RPL18AQ02543 176 aaKnown RBP11.71□□□□□ -0.54
PCDHA1-201ENST00000378133 GIG44P09565 113 aaPredicted RBP11.7□□□□□ -0.54
PCDHA1-201ENST00000378133 LOC100131303A0A0U1RQF7 123 aa11.7□□□□□ -0.54
PCDHA1-201ENST00000378133 UBE2L6O14933 153 aa11.69□□□□□ -0.54
PCDHA1-201ENST00000378133 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
PCDHA1-201ENST00000378133 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
PCDHA1-201ENST00000378133 LINC00846Q9NV44 126 aa11.69□□□□□ -0.54
PCDHA1-201ENST00000378133 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 LINC00158P58513 81 aa11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 ACANP16112 2415 aa11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 H0YGX0 51 aa11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
PCDHA1-201ENST00000378133 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
PCDHA1-201ENST00000378133 Q6JHZ5 121 aa11.67□□□□□ -0.54
PCDHA1-201ENST00000378133 MTORP42345 2549 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 HECTD1Q9ULT8 2610 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 LECT2O14960 151 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 OBSCN-AS1Q96MR7 158 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 A0A087WVE0 104 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
PCDHA1-201ENST00000378133 F8WDY8 70 aa11.65□□□□□ -0.54
PCDHA1-201ENST00000378133 TMEM258P61165 79 aa11.65□□□□□ -0.54
PCDHA1-201ENST00000378133 SERP2Q8N6R1 65 aa11.65□□□□□ -0.54
PCDHA1-201ENST00000378133 NCR3O14931 201 aa11.65□□□□□ -0.55
PCDHA1-201ENST00000378133 CCL18P55774 89 aa11.65□□□□□ -0.55
PCDHA1-201ENST00000378133 C16orf74Q96GX8 76 aa11.64□□□□□ -0.55
PCDHA1-201ENST00000378133 TRGV4A0A0C4DH28 118 aa11.63□□□□□ -0.55
PCDHA1-201ENST00000378133 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
PCDHA1-201ENST00000378133 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 SLPIP03973 132 aa11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 KRTAP1-1Q07627 177 aa11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 C19orf73Q9NVV2 129 aa11.62□□□□□ -0.55
PCDHA1-201ENST00000378133 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
PCDHA1-201ENST00000378133 PFN2P35080 140 aa11.61□□□□□ -0.55
PCDHA1-201ENST00000378133 IGLV4-60A0A075B6I1 120 aa11.61□□□□□ -0.55
PCDHA1-201ENST00000378133 PAX4O43316 350 aa11.61□□□□□ -0.55
PCDHA1-201ENST00000378133 FN1P02751 2386 aaKnown RBP11.61□□□□□ -0.55
PCDHA1-201ENST00000378133 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
PCDHA1-201ENST00000378133 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
PCDHA1-201ENST00000378133 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
PCDHA1-201ENST00000378133 UPK3BQ9BT76 320 aa11.6□□□□□ -0.55
PCDHA1-201ENST00000378133 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
PCDHA1-201ENST00000378133 IGLV1-51P01701 117 aa11.59□□□□□ -0.55
PCDHA1-201ENST00000378133 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
PCDHA1-201ENST00000378133 FHL2Q14192 279 aa11.58□□□□□ -0.56
PCDHA1-201ENST00000378133 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
PCDHA1-201ENST00000378133 ORMDL1Q9P0S3 153 aa11.58□□□□□ -0.56
PCDHA1-201ENST00000378133 PRO0628Q9UI54 55 aa11.58□□□□□ -0.56
PCDHA1-201ENST00000378133 PKIGQ9Y2B9 76 aa11.58□□□□□ -0.56
PCDHA1-201ENST00000378133 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
PCDHA1-201ENST00000378133 CCKP06307 115 aa11.56□□□□□ -0.56
PCDHA1-201ENST00000378133 DEFB130BP0DP73 79 aa11.54□□□□□ -0.56
PCDHA1-201ENST00000378133 DEFB130AP0DP74 79 aa11.54□□□□□ -0.56
PCDHA1-201ENST00000378133 SS18Q15532 418 aa11.54□□□□□ -0.56
PCDHA1-201ENST00000378133 C16orf95Q9H693 158 aa11.53□□□□□ -0.56
PCDHA1-201ENST00000378133 A0A087WZ39 114 aa11.53□□□□□ -0.56
PCDHA1-201ENST00000378133 RNASE1P07998 156 aaKnown RBP11.53□□□□□ -0.56
PCDHA1-201ENST00000378133 ANK3Q12955 4377 aaKnown RBP11.53□□□□□ -0.56
PCDHA1-201ENST00000378133 SMR3AQ99954 134 aa11.52□□□□□ -0.56
PCDHA1-201ENST00000378133 C11orf68Q9H3H3 251 aaKnown RBP11.52□□□□□ -0.56
PCDHA1-201ENST00000378133 HILS1P60008 231 aa11.52□□□□□ -0.57
PCDHA1-201ENST00000378133 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
PCDHA1-201ENST00000378133 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.57
PCDHA1-201ENST00000378133 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
PCDHA1-201ENST00000378133 OTOGQ6ZRI0 2925 aa11.51□□□□□ -0.57
PCDHA1-201ENST00000378133 LY6G6DO95868 133 aa11.51□□□□□ -0.57
PCDHA1-201ENST00000378133 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
PCDHA1-201ENST00000378133 JMJD7-PLA2G4BH0Y9G9 81 aa11.5□□□□□ -0.57
PCDHA1-201ENST00000378133 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
PCDHA1-201ENST00000378133 GHRHP01286 108 aa11.49□□□□□ -0.57
PCDHA1-201ENST00000378133 SEC61GP60059 68 aa11.49□□□□□ -0.57
PCDHA1-201ENST00000378133 TRAV23DV6A0A075B6W5 121 aa11.48□□□□□ -0.57
PCDHA1-201ENST00000378133 GYPEP15421 78 aa11.47□□□□□ -0.57
PCDHA1-201ENST00000378133 TMEM256-PLSCR3K7ERE1 68 aa11.47□□□□□ -0.57
PCDHA1-201ENST00000378133 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
PCDHA1-201ENST00000378133 Q8N814 137 aa11.47□□□□□ -0.57
PCDHA1-201ENST00000378133 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
PCDHA1-201ENST00000378133 XCL1P47992 114 aa11.46□□□□□ -0.57
PCDHA1-201ENST00000378133 ATP5EP2Q5VTU8 51 aa11.46□□□□□ -0.57
PCDHA1-201ENST00000378133 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
PCDHA1-201ENST00000378133 PRR3P79522 188 aaKnown RBP11.46□□□□□ -0.58
PCDHA1-201ENST00000378133 A0A096LPF7 62 aa11.45□□□□□ -0.58
PCDHA1-201ENST00000378133 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
PCDHA1-201ENST00000378133 NOTCH2Q04721 2471 aa11.44□□□□□ -0.58
PCDHA1-201ENST00000378133 NANOS2P60321 138 aaKnown RBP11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 FAM236DA0A1B0GTK5 79 aa11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 NDUFC2O95298 119 aa11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 FAM236CP0DP71 79 aa11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
PCDHA1-201ENST00000378133 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
PCDHA1-201ENST00000378133 C20orf197Q8N268 126 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms