RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GAGE2AQ6NT46 116 aa14.17□□□□□ -0.14
CLN5-201ENST00000377453 OR13C6PQ8NH95 151 aa14.17□□□□□ -0.14
CLN5-201ENST00000377453 LINC00959A0A1B0GUT2 108 aa14.16□□□□□ -0.14
CLN5-201ENST00000377453 PAX4O43316 350 aa14.16□□□□□ -0.14
CLN5-201ENST00000377453 RPL28P46779 137 aaKnown RBP14.16□□□□□ -0.14
CLN5-201ENST00000377453 KRTAP10-3P60369 221 aa14.15□□□□□ -0.14
CLN5-201ENST00000377453 PRR3P79522 188 aaKnown RBP14.15□□□□□ -0.14
CLN5-201ENST00000377453 A0A087WZ39 114 aa14.14□□□□□ -0.15
CLN5-201ENST00000377453 FAM236AA0A1B0GUQ0 79 aa14.14□□□□□ -0.15
CLN5-201ENST00000377453 FAM236BA0A1B0GV22 79 aa14.14□□□□□ -0.15
CLN5-201ENST00000377453 HIVEP2P31629 2446 aa14.14□□□□□ -0.15
CLN5-201ENST00000377453 RNASE1P07998 156 aaKnown RBP14.14□□□□□ -0.15
CLN5-201ENST00000377453 MALP21145 153 aa14.14□□□□□ -0.15
CLN5-201ENST00000377453 C6orf226Q5I0X4 101 aa14.13□□□□□ -0.15
CLN5-201ENST00000377453 LINC00482Q8N8I6 264 aa14.13□□□□□ -0.15
CLN5-201ENST00000377453 MRPL23Q16540 153 aaKnown RBP14.12□□□□□ -0.15
CLN5-201ENST00000377453 C14orf132Q9NPU4 83 aa14.12□□□□□ -0.15
CLN5-201ENST00000377453 TRBV7-7A0A0K0K1E9 115 aa14.11□□□□□ -0.15
CLN5-201ENST00000377453 LECT2O14960 151 aa14.11□□□□□ -0.15
CLN5-201ENST00000377453 IGLV10-54A0A075B6I4 117 aa14.11□□□□□ -0.15
CLN5-201ENST00000377453 C16orf95Q9H693 158 aa14.1□□□□□ -0.15
CLN5-201ENST00000377453 CMC4P56277 68 aaPredicted RBP14.1□□□□□ -0.15
CLN5-201ENST00000377453 FAM222AQ5U5X8 452 aa14.1□□□□□ -0.15
CLN5-201ENST00000377453 IBA57-AS1B1ANH7 110 aa14.09□□□□□ -0.15
CLN5-201ENST00000377453 DNAL4O96015 105 aa14.09□□□□□ -0.15
CLN5-201ENST00000377453 NCR3O14931 201 aa14.08□□□□□ -0.16
CLN5-201ENST00000377453 PF4P02776 101 aa14.07□□□□□ -0.16
CLN5-201ENST00000377453 C9orf116Q5BN46 136 aaPredicted RBP14.07□□□□□ -0.16
CLN5-201ENST00000377453 X6R8D5 127 aa14.07□□□□□ -0.16
CLN5-201ENST00000377453 FAM110AQ9BQ89 295 aa14.06□□□□□ -0.16
CLN5-201ENST00000377453 ACYP1P07311 99 aa14.05□□□□□ -0.16
CLN5-201ENST00000377453 LINC00269Q8N2A0 174 aa14.05□□□□□ -0.16
CLN5-201ENST00000377453 LINC00643Q86TS7 51 aa14.04□□□□□ -0.16
CLN5-201ENST00000377453 SS18Q15532 418 aa14.03□□□□□ -0.16
CLN5-201ENST00000377453 DEFB135Q30KP9 77 aa14.02□□□□□ -0.17
CLN5-201ENST00000377453 LINC00526Q96FQ7 95 aa14.02□□□□□ -0.17
CLN5-201ENST00000377453 FLNBO75369 2602 aaKnown RBP14.02□□□□□ -0.17
CLN5-201ENST00000377453 SDIM1Q6ZPB5 146 aa14.01□□□□□ -0.17
CLN5-201ENST00000377453 INAFM2P0DMQ5 153 aa14.01□□□□□ -0.17
CLN5-201ENST00000377453 HILS1P60008 231 aa14.01□□□□□ -0.17
CLN5-201ENST00000377453 KIR2DL5BQ8NHK3 375 aa14.01□□□□□ -0.17
CLN5-201ENST00000377453 IGKV3D-7A0A0C4DH55 119 aa14□□□□□ -0.17
CLN5-201ENST00000377453 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
CLN5-201ENST00000377453 Q8NDZ9 215 aa14□□□□□ -0.17
CLN5-201ENST00000377453 HIVEP1P15822 2718 aa13.99□□□□□ -0.17
CLN5-201ENST00000377453 LINC00612Q8N6U2 182 aa13.99□□□□□ -0.17
CLN5-201ENST00000377453 PRO0255Q9UI72 69 aa13.99□□□□□ -0.17
CLN5-201ENST00000377453 NANOS2P60321 138 aaKnown RBP13.98□□□□□ -0.17
CLN5-201ENST00000377453 LINC00846Q9NV44 126 aa13.98□□□□□ -0.17
CLN5-201ENST00000377453 TENM1Q9UKZ4 2725 aa13.98□□□□□ -0.17
CLN5-201ENST00000377453 ANGP03950 147 aaKnown RBP13.97□□□□□ -0.17
CLN5-201ENST00000377453 H0YGX0 51 aa13.97□□□□□ -0.17
CLN5-201ENST00000377453 Q8IZM0 81 aa13.96□□□□□ -0.17
CLN5-201ENST00000377453 CHCHD10Q8WYQ3 142 aaPredicted RBP13.96□□□□□ -0.17
CLN5-201ENST00000377453 HTN3P15516 51 aa13.95□□□□□ -0.18
CLN5-201ENST00000377453 KIAA0087Q14695 138 aa13.95□□□□□ -0.18
CLN5-201ENST00000377453 C6orf223Q8N319 242 aa13.95□□□□□ -0.18
CLN5-201ENST00000377453 CELA1Q9UNI1 258 aa13.95□□□□□ -0.18
CLN5-201ENST00000377453 NSD1Q96L73 2696 aaPredicted RBP13.95□□□□□ -0.18
CLN5-201ENST00000377453 A0A1B0GUV1 79 aa13.94□□□□□ -0.18
CLN5-201ENST00000377453 SMIM20Q8N5G0 67 aa13.94□□□□□ -0.18
CLN5-201ENST00000377453 TRRAPQ9Y4A5 3859 aa13.94□□□□□ -0.18
CLN5-201ENST00000377453 A0A087WVE0 104 aa13.94□□□□□ -0.18
CLN5-201ENST00000377453 LY6G6DO95868 133 aa13.94□□□□□ -0.18
CLN5-201ENST00000377453 IMUPQ9GZP8 106 aa13.93□□□□□ -0.18
CLN5-201ENST00000377453 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
CLN5-201ENST00000377453 C10orf25Q5T742 122 aa13.92□□□□□ -0.18
CLN5-201ENST00000377453 CXCL5P42830 114 aa13.92□□□□□ -0.18
CLN5-201ENST00000377453 REG3AQ06141 175 aa13.91□□□□□ -0.18
CLN5-201ENST00000377453 IGHV4-28A0A0C4DH34 117 aa13.91□□□□□ -0.18
CLN5-201ENST00000377453 CFAP161Q6P656 301 aa13.91□□□□□ -0.18
CLN5-201ENST00000377453 OBSCN-AS1Q96MR7 158 aa13.9□□□□□ -0.18
CLN5-201ENST00000377453 ORMDL1Q9P0S3 153 aa13.9□□□□□ -0.18
CLN5-201ENST00000377453 CD164L2Q6UWJ8 174 aa13.89□□□□□ -0.19
CLN5-201ENST00000377453 UNQ6190/PRO20217Q6UXQ8 127 aa13.88□□□□□ -0.19
CLN5-201ENST00000377453 ATRQ13535 2644 aa13.87□□□□□ -0.19
CLN5-201ENST00000377453 C9orf153Q5TBE3 101 aa13.87□□□□□ -0.19
CLN5-201ENST00000377453 DAD1P61803 113 aa13.87□□□□□ -0.19
CLN5-201ENST00000377453 C6orf99Q4VX62 202 aa13.86□□□□□ -0.19
CLN5-201ENST00000377453 WFDC9Q8NEX5 89 aa13.86□□□□□ -0.19
CLN5-201ENST00000377453 INAFM1C9JVW0 142 aa13.85□□□□□ -0.19
CLN5-201ENST00000377453 Q8N814 137 aa13.85□□□□□ -0.19
CLN5-201ENST00000377453 C3orf22Q8N5N4 141 aa13.84□□□□□ -0.19
CLN5-201ENST00000377453 CYSTM1Q9H1C7 97 aa13.82□□□□□ -0.2
CLN5-201ENST00000377453 SMIM9A6NGZ8 99 aa13.82□□□□□ -0.2
CLN5-201ENST00000377453 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
CLN5-201ENST00000377453 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
CLN5-201ENST00000377453 TEP1Q99973 2627 aaKnown RBP13.81□□□□□ -0.2
CLN5-201ENST00000377453 SPAG11BQ08648 103 aa13.8□□□□□ -0.2
CLN5-201ENST00000377453 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
CLN5-201ENST00000377453 S100A7L2Q5SY68 101 aa13.8□□□□□ -0.2
CLN5-201ENST00000377453 TMEM126AQ9H061 195 aa13.8□□□□□ -0.2
CLN5-201ENST00000377453 LINC01561Q8N1V8 128 aa13.79□□□□□ -0.2
CLN5-201ENST00000377453 RPL18AQ02543 176 aaKnown RBP13.78□□□□□ -0.2
CLN5-201ENST00000377453 CCKP06307 115 aa13.78□□□□□ -0.2
CLN5-201ENST00000377453 HIST1H4AP62805 103 aaKnown RBP13.78□□□□□ -0.2
CLN5-201ENST00000377453 Q8NAQ8 132 aa13.78□□□□□ -0.2
CLN5-201ENST00000377453 CYSRT1A8MQ03 144 aa13.77□□□□□ -0.2
CLN5-201ENST00000377453 UQCRQO14949 82 aa13.77□□□□□ -0.2
CLN5-201ENST00000377453 Q6JHZ5 121 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms