RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
PTCH1-202ENST00000375271 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
PTCH1-202ENST00000375271 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-202ENST00000375271 LINC00173Q6ZV60 143 aa8.29□□□□□ -1.08
PTCH1-202ENST00000375271 MAP1LC3AQ9H492 121 aa8.29□□□□□ -1.08
PTCH1-202ENST00000375271 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
PTCH1-202ENST00000375271 RPL37AP8A6NKH3 93 aa8.28□□□□□ -1.08
PTCH1-202ENST00000375271 CXCL5P42830 114 aa8.28□□□□□ -1.08
PTCH1-202ENST00000375271 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
PTCH1-202ENST00000375271 AKAP14Q86UN6 197 aa8.28□□□□□ -1.08
PTCH1-202ENST00000375271 NKAPP1Q8N9T2 125 aa8.28□□□□□ -1.08
PTCH1-202ENST00000375271 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
PTCH1-202ENST00000375271 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
PTCH1-202ENST00000375271 HERVK_113P63121 156 aa8.27□□□□□ -1.09
PTCH1-202ENST00000375271 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
PTCH1-202ENST00000375271 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
PTCH1-202ENST00000375271 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
PTCH1-202ENST00000375271 ANAPC11Q9NYG5 84 aa8.26□□□□□ -1.09
PTCH1-202ENST00000375271 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
PTCH1-202ENST00000375271 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
PTCH1-202ENST00000375271 ZC2HC1BQ5TFG8 222 aa8.25□□□□□ -1.09
PTCH1-202ENST00000375271 ATP5L2Q7Z4Y8 100 aa8.25□□□□□ -1.09
PTCH1-202ENST00000375271 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
PTCH1-202ENST00000375271 A0A1B0GXF2 115 aa8.24□□□□□ -1.09
PTCH1-202ENST00000375271 G0S2P27469 103 aa8.24□□□□□ -1.09
PTCH1-202ENST00000375271 PEA15Q15121 130 aa8.24□□□□□ -1.09
PTCH1-202ENST00000375271 NPSP0C0P6 89 aa8.23□□□□□ -1.09
PTCH1-202ENST00000375271 Q8N8P6 123 aa8.23□□□□□ -1.09
PTCH1-202ENST00000375271 AMELXQ99217 191 aa8.23□□□□□ -1.09
PTCH1-202ENST00000375271 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
PTCH1-202ENST00000375271 PNRC1Q12796 327 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-202ENST00000375271 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
PTCH1-202ENST00000375271 IGKV2-28A0A075B6P5 120 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 K7EMI3 77 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 IGKV2D-28P01615 120 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 RAB5BP61020 215 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
PTCH1-202ENST00000375271 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
PTCH1-202ENST00000375271 CTAG1AP78358 180 aa8.19□□□□□ -1.1
PTCH1-202ENST00000375271 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
PTCH1-202ENST00000375271 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
PTCH1-202ENST00000375271 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
PTCH1-202ENST00000375271 LINC01547P58512 204 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-202ENST00000375271 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
PTCH1-202ENST00000375271 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
PTCH1-202ENST00000375271 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 IGIPA6NJ69 53 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 ATP5LO75964 103 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 PRLHP81277 87 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
PTCH1-202ENST00000375271 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
PTCH1-202ENST00000375271 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
PTCH1-202ENST00000375271 C9JQL5 133 aa8.15□□□□□ -1.1
PTCH1-202ENST00000375271 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
PTCH1-202ENST00000375271 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.1
PTCH1-202ENST00000375271 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.1
PTCH1-202ENST00000375271 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
PTCH1-202ENST00000375271 H3BRM9 83 aa8.13□□□□□ -1.11
PTCH1-202ENST00000375271 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
PTCH1-202ENST00000375271 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-202ENST00000375271 CBLN2Q8IUK8 224 aa8.13□□□□□ -1.11
PTCH1-202ENST00000375271 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 SPINK8P0C7L1 97 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 PFN2P35080 140 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
PTCH1-202ENST00000375271 ERASQ7Z444 233 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 GNB1LQ9BYB4 327 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
PTCH1-202ENST00000375271 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
PTCH1-202ENST00000375271 SCO1O75880 301 aa8.11□□□□□ -1.11
PTCH1-202ENST00000375271 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-202ENST00000375271 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
PTCH1-202ENST00000375271 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
PTCH1-202ENST00000375271 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
PTCH1-202ENST00000375271 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
PTCH1-202ENST00000375271 NDUFA12Q9UI09 145 aa8.1□□□□□ -1.11
PTCH1-202ENST00000375271 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
PTCH1-202ENST00000375271 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
PTCH1-202ENST00000375271 RAB14P61106 215 aa8.08□□□□□ -1.12
PTCH1-202ENST00000375271 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
PTCH1-202ENST00000375271 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
PTCH1-202ENST00000375271 A0A1B0GVG6 124 aa8.06□□□□□ -1.12
PTCH1-202ENST00000375271 PMVKQ15126 192 aa8.06□□□□□ -1.12
PTCH1-202ENST00000375271 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
PTCH1-202ENST00000375271 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
PTCH1-202ENST00000375271 M0R378 163 aa8.05□□□□□ -1.12
PTCH1-202ENST00000375271 VPREB1P12018 145 aa8.05□□□□□ -1.12
PTCH1-202ENST00000375271 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
PTCH1-202ENST00000375271 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
PTCH1-202ENST00000375271 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
PTCH1-202ENST00000375271 COX17Q14061 63 aa8.04□□□□□ -1.12
PTCH1-202ENST00000375271 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
PTCH1-202ENST00000375271 ASB16-AS1Q495Z4 193 aa8.04□□□□□ -1.12
PTCH1-202ENST00000375271 NDUFA6P56556 154 aa8.03□□□□□ -1.12
PTCH1-202ENST00000375271 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
PTCH1-202ENST00000375271 DAND5Q8N907 189 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms