RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MIFP14174 115 aa11.01□□□□□ -0.65
CNKSR1-202ENST00000374253 KRTAP24-1Q3LI83 254 aa11.01□□□□□ -0.65
CNKSR1-202ENST00000374253 COX6CP09669 75 aa11.01□□□□□ -0.65
CNKSR1-202ENST00000374253 SS18Q15532 418 aa11.01□□□□□ -0.65
CNKSR1-202ENST00000374253 SPART-AS1P0CW21 52 aa11□□□□□ -0.65
CNKSR1-202ENST00000374253 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
CNKSR1-202ENST00000374253 A0A1B0GUV1 79 aa11□□□□□ -0.65
CNKSR1-202ENST00000374253 NTN5Q8WTR8 489 aaPredicted RBP10.99□□□□□ -0.65
CNKSR1-202ENST00000374253 PPDPFLQ8WWR9 84 aa10.99□□□□□ -0.65
CNKSR1-202ENST00000374253 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
CNKSR1-202ENST00000374253 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
CNKSR1-202ENST00000374253 REG3AQ06141 175 aa10.96□□□□□ -0.65
CNKSR1-202ENST00000374253 LINC00337Q8N6G1 96 aa10.96□□□□□ -0.65
CNKSR1-202ENST00000374253 CHCHD10Q8WYQ3 142 aaPredicted RBP10.96□□□□□ -0.65
CNKSR1-202ENST00000374253 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.66
CNKSR1-202ENST00000374253 LST1O00453 97 aa10.96□□□□□ -0.66
CNKSR1-202ENST00000374253 CCL18P55774 89 aa10.96□□□□□ -0.66
CNKSR1-202ENST00000374253 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 WIPF1O43516 503 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 SIGMAR1Q99720 223 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 SPATA25Q9BR10 227 aa10.95□□□□□ -0.66
CNKSR1-202ENST00000374253 NBEAL1Q6ZS30 2694 aa10.94□□□□□ -0.66
CNKSR1-202ENST00000374253 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CNKSR1-202ENST00000374253 MRPL23Q16540 153 aaKnown RBP10.94□□□□□ -0.66
CNKSR1-202ENST00000374253 LINC00526Q96FQ7 95 aa10.94□□□□□ -0.66
CNKSR1-202ENST00000374253 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
CNKSR1-202ENST00000374253 SHISA2Q6UWI4 295 aa10.93□□□□□ -0.66
CNKSR1-202ENST00000374253 IBA57-AS1B1ANH7 110 aa10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 CRPP02741 224 aa10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 KLK12Q9UKR0 248 aa10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 MALP21145 153 aa10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 FAM218AQ96MZ4 157 aa10.92□□□□□ -0.66
CNKSR1-202ENST00000374253 COX7A2LO14548 114 aa10.91□□□□□ -0.66
CNKSR1-202ENST00000374253 CKS1BP61024 79 aa10.91□□□□□ -0.66
CNKSR1-202ENST00000374253 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
CNKSR1-202ENST00000374253 PRR3P79522 188 aaKnown RBP10.9□□□□□ -0.67
CNKSR1-202ENST00000374253 Q6ZTC4 211 aa10.9□□□□□ -0.67
CNKSR1-202ENST00000374253 Q8IZM0 81 aa10.9□□□□□ -0.67
CNKSR1-202ENST00000374253 BAHCC1Q9P281 2608 aa10.89□□□□□ -0.67
CNKSR1-202ENST00000374253 PRB2P02812 416 aaPredicted RBP10.89□□□□□ -0.67
CNKSR1-202ENST00000374253 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
CNKSR1-202ENST00000374253 LELP1Q5T871 98 aa10.89□□□□□ -0.67
CNKSR1-202ENST00000374253 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
CNKSR1-202ENST00000374253 CYSRT1A8MQ03 144 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 KIAA0087Q14695 138 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 MT-ATP8P03928 68 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 XGP55808 180 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 Q9HAA7 133 aa10.88□□□□□ -0.67
CNKSR1-202ENST00000374253 LYPD5Q6UWN5 251 aa10.87□□□□□ -0.67
CNKSR1-202ENST00000374253 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
CNKSR1-202ENST00000374253 M0QXV9 152 aa10.86□□□□□ -0.67
CNKSR1-202ENST00000374253 DNAH3Q8TD57 4116 aa10.86□□□□□ -0.67
CNKSR1-202ENST00000374253 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
CNKSR1-202ENST00000374253 KPRPQ5T749 579 aaPredicted RBP10.85□□□□□ -0.67
CNKSR1-202ENST00000374253 WFDC10BQ8IUB3 73 aa10.85□□□□□ -0.67
CNKSR1-202ENST00000374253 H3BT86 120 aa10.85□□□□□ -0.67
CNKSR1-202ENST00000374253 A0A0J9YWU9 116 aa10.84□□□□□ -0.67
CNKSR1-202ENST00000374253 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
CNKSR1-202ENST00000374253 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
CNKSR1-202ENST00000374253 UNQ6190/PRO20217Q6UXQ8 127 aa10.83□□□□□ -0.68
CNKSR1-202ENST00000374253 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
CNKSR1-202ENST00000374253 A0A087WYN8 130 aa10.83□□□□□ -0.68
CNKSR1-202ENST00000374253 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
CNKSR1-202ENST00000374253 EGFEM1PQ0D2K5 195 aa10.82□□□□□ -0.68
CNKSR1-202ENST00000374253 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
CNKSR1-202ENST00000374253 Q8NDZ9 215 aa10.81□□□□□ -0.68
CNKSR1-202ENST00000374253 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
CNKSR1-202ENST00000374253 BAALC-AS2P0C853 105 aa10.8□□□□□ -0.68
CNKSR1-202ENST00000374253 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
CNKSR1-202ENST00000374253 LINC01561Q8N1V8 128 aa10.79□□□□□ -0.68
CNKSR1-202ENST00000374253 PRR34Q9NV39 138 aa10.79□□□□□ -0.68
CNKSR1-202ENST00000374253 NCR3O14931 201 aa10.78□□□□□ -0.68
CNKSR1-202ENST00000374253 TRACP01848 142 aa10.78□□□□□ -0.68
CNKSR1-202ENST00000374253 SLPIP03973 132 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 ESRGQ1W209 222 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 A0A1B0GV72 72 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 HIGD2BQ4VC39 106 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 MRAPQ8TCY5 172 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
CNKSR1-202ENST00000374253 LECT2O14960 151 aa10.76□□□□□ -0.69
CNKSR1-202ENST00000374253 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
CNKSR1-202ENST00000374253 CXCL5P42830 114 aa10.76□□□□□ -0.69
CNKSR1-202ENST00000374253 C11orf45Q8TAV5 145 aa10.75□□□□□ -0.69
CNKSR1-202ENST00000374253 SCGB1A1P11684 91 aa10.75□□□□□ -0.69
CNKSR1-202ENST00000374253 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
CNKSR1-202ENST00000374253 DNAL4O96015 105 aa10.74□□□□□ -0.69
CNKSR1-202ENST00000374253 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
CNKSR1-202ENST00000374253 TTC32Q5I0X7 151 aa10.73□□□□□ -0.69
CNKSR1-202ENST00000374253 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
CNKSR1-202ENST00000374253 COX17Q14061 63 aa10.73□□□□□ -0.69
CNKSR1-202ENST00000374253 HUWE1Q7Z6Z7 4374 aaKnown RBP10.72□□□□□ -0.69
CNKSR1-202ENST00000374253 XAGE1AQ9HD64 81 aa10.72□□□□□ -0.69
CNKSR1-202ENST00000374253 DEFB121Q5J5C9 76 aa10.71□□□□□ -0.7
CNKSR1-202ENST00000374253 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms