RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 J3QQQ9 107 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 DLEU1O43261 78 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
CDX4-201ENST00000373514 A0A087WZ39 114 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 LGALS3P17931 250 aaKnown RBP12.1□□□□□ -0.47
CDX4-201ENST00000373514 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
CDX4-201ENST00000373514 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
CDX4-201ENST00000373514 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
CDX4-201ENST00000373514 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
CDX4-201ENST00000373514 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 C14orf177Q52M58 125 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 COX7A2LO14548 114 aa12.07□□□□□ -0.48
CDX4-201ENST00000373514 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
CDX4-201ENST00000373514 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
CDX4-201ENST00000373514 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
CDX4-201ENST00000373514 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
CDX4-201ENST00000373514 SLPIP03973 132 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 MALP21145 153 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 CTAG1AP78358 180 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 GCSHP23434 173 aa12.02□□□□□ -0.48
CDX4-201ENST00000373514 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.49
CDX4-201ENST00000373514 SCGB1D4Q6XE38 83 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 NDUFA1O15239 70 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 ORAOV1Q8WV07 137 aa12□□□□□ -0.49
CDX4-201ENST00000373514 APOMO95445 188 aa11.99□□□□□ -0.49
CDX4-201ENST00000373514 CNBPP62633 177 aaKnown RBP11.99□□□□□ -0.49
CDX4-201ENST00000373514 Q8IZM0 81 aa11.98□□□□□ -0.49
CDX4-201ENST00000373514 KIAA1109Q2LD37 5005 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 PRSS2P07478 247 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
CDX4-201ENST00000373514 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CDX4-201ENST00000373514 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
CDX4-201ENST00000373514 HAMPP81172 84 aa11.96□□□□□ -0.5
CDX4-201ENST00000373514 KIAA0087Q14695 138 aa11.96□□□□□ -0.5
CDX4-201ENST00000373514 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
CDX4-201ENST00000373514 FAM30AQ9NZY2 134 aa11.95□□□□□ -0.5
CDX4-201ENST00000373514 HSD52Q0P140 79 aa11.94□□□□□ -0.5
CDX4-201ENST00000373514 APOBP04114 4563 aaKnown RBP11.93□□□□□ -0.5
CDX4-201ENST00000373514 HERV-K104P63124 156 aa11.93□□□□□ -0.5
CDX4-201ENST00000373514 Q6ZRU5 148 aa11.93□□□□□ -0.5
CDX4-201ENST00000373514 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
CDX4-201ENST00000373514 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
CDX4-201ENST00000373514 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
CDX4-201ENST00000373514 HIST1H4GQ99525 98 aa11.92□□□□□ -0.5
CDX4-201ENST00000373514 CXCL5P42830 114 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 CKS1BP61024 79 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
CDX4-201ENST00000373514 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 M0R143 59 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 TAL2Q16559 108 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 LITAFQ99732 161 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SNHG12Q9BXW3 62 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 RYR1P21817 5038 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 TIMM17BO60830 172 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDX4-201ENST00000373514 BATFQ16520 125 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 PANO1I0J062 215 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
CDX4-201ENST00000373514 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 Q6ZSA8 131 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 DNAH8Q96JB1 4490 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 XGP55808 180 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
CDX4-201ENST00000373514 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
CDX4-201ENST00000373514 CEND1Q8N111 149 aa11.87□□□□□ -0.51
CDX4-201ENST00000373514 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 SPANXCQ9NY87 97 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 FXYD2P54710 66 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 DAND5Q8N907 189 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 KRTAP17-1Q9BYP8 105 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms