RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 J3QQQ9 107 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 DLEU1O43261 78 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
CDX4-201ENST00000373514 A0A087WZ39 114 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
CDX4-201ENST00000373514 LGALS3P17931 250 aaKnown RBP12.1□□□□□ -0.47
CDX4-201ENST00000373514 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
CDX4-201ENST00000373514 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
CDX4-201ENST00000373514 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
CDX4-201ENST00000373514 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
CDX4-201ENST00000373514 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 C14orf177Q52M58 125 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
CDX4-201ENST00000373514 COX7A2LO14548 114 aa12.07□□□□□ -0.48
CDX4-201ENST00000373514 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
CDX4-201ENST00000373514 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
CDX4-201ENST00000373514 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
CDX4-201ENST00000373514 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
CDX4-201ENST00000373514 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
CDX4-201ENST00000373514 SLPIP03973 132 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 MALP21145 153 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 CTAG1AP78358 180 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
CDX4-201ENST00000373514 GCSHP23434 173 aa12.02□□□□□ -0.48
CDX4-201ENST00000373514 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.49
CDX4-201ENST00000373514 SCGB1D4Q6XE38 83 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 NDUFA1O15239 70 aa12.01□□□□□ -0.49
CDX4-201ENST00000373514 ORAOV1Q8WV07 137 aa12□□□□□ -0.49
CDX4-201ENST00000373514 APOMO95445 188 aa11.99□□□□□ -0.49
CDX4-201ENST00000373514 CNBPP62633 177 aaKnown RBP11.99□□□□□ -0.49
CDX4-201ENST00000373514 Q8IZM0 81 aa11.98□□□□□ -0.49
CDX4-201ENST00000373514 KIAA1109Q2LD37 5005 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 PRSS2P07478 247 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
CDX4-201ENST00000373514 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
CDX4-201ENST00000373514 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CDX4-201ENST00000373514 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
CDX4-201ENST00000373514 HAMPP81172 84 aa11.96□□□□□ -0.5
CDX4-201ENST00000373514 KIAA0087Q14695 138 aa11.96□□□□□ -0.5
CDX4-201ENST00000373514 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
CDX4-201ENST00000373514 FAM30AQ9NZY2 134 aa11.95□□□□□ -0.5
CDX4-201ENST00000373514 HSD52Q0P140 79 aa11.94□□□□□ -0.5
CDX4-201ENST00000373514 APOBP04114 4563 aaKnown RBP11.93□□□□□ -0.5
CDX4-201ENST00000373514 HERV-K104P63124 156 aa11.93□□□□□ -0.5
CDX4-201ENST00000373514 Q6ZRU5 148 aa11.93□□□□□ -0.5
CDX4-201ENST00000373514 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
CDX4-201ENST00000373514 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
CDX4-201ENST00000373514 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
CDX4-201ENST00000373514 HIST1H4GQ99525 98 aa11.92□□□□□ -0.5
CDX4-201ENST00000373514 CXCL5P42830 114 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 CKS1BP61024 79 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
CDX4-201ENST00000373514 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 M0R143 59 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 TAL2Q16559 108 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 LITAFQ99732 161 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 SNHG12Q9BXW3 62 aa11.91□□□□□ -0.5
CDX4-201ENST00000373514 RYR1P21817 5038 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 TIMM17BO60830 172 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDX4-201ENST00000373514 BATFQ16520 125 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
CDX4-201ENST00000373514 PANO1I0J062 215 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
CDX4-201ENST00000373514 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 Q6ZSA8 131 aa11.89□□□□□ -0.51
CDX4-201ENST00000373514 DNAH8Q96JB1 4490 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 XGP55808 180 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
CDX4-201ENST00000373514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
CDX4-201ENST00000373514 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
CDX4-201ENST00000373514 CEND1Q8N111 149 aa11.87□□□□□ -0.51
CDX4-201ENST00000373514 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 SPANXCQ9NY87 97 aa11.86□□□□□ -0.51
CDX4-201ENST00000373514 FXYD2P54710 66 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 DAND5Q8N907 189 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 KRTAP17-1Q9BYP8 105 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
CDX4-201ENST00000373514 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms