RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 C2orf48Q96LS8 159 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 RPL36AP83881 106 aaKnown RBP4.48□□□□□ -1.69
CHD6-202ENST00000373222 SBSPONQ8IVN8 264 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 CSNK1G2-AS1Q8NCQ2 148 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
CHD6-202ENST00000373222 RPL36ALQ969Q0 106 aaKnown RBP4.48□□□□□ -1.69
CHD6-202ENST00000373222 ICOSQ9Y6W8 199 aa4.48□□□□□ -1.69
CHD6-202ENST00000373222 A0A096LPF7 62 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 J3QR89 54 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 DEFB4AO15263 64 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 DEFB130BP0DP73 79 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 DEFB130AP0DP74 79 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 GAGE6Q13070 117 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 TMEM86BQ8N661 226 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 DNAJC30Q96LL9 226 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 CDC42SE2Q9NRR3 84 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 MAST4O15021 2626 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 TRBV20-1A0A075B6N2 111 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 IGLV5-45A0A087WSX0 123 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 TRAV4A0A0B4J268 109 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 CRLF1O75462 422 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 SPANXDQ9BXN6 97 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
CHD6-202ENST00000373222 LYRM9A8MSI8 78 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 NDUFA1O15239 70 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
CHD6-202ENST00000373222 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 H7C423 109 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 CLPSL2Q6UWE3 100 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 PRIMA1Q86XR5 153 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 ATP6V0E2Q8NHE4 81 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 LINC00308Q8TCZ7 52 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.7
CHD6-202ENST00000373222 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
CHD6-202ENST00000373222 TRGV4A0A0C4DH28 118 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 HERVK_113P63121 156 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 FHL2Q14192 279 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 LYRM7Q5U5X0 104 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 F8P00451 2351 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 DAZ2Q13117 558 aaKnown RBP4.45□□□□□ -1.7
CHD6-202ENST00000373222 MEIG1Q5JSS6 88 aa4.45□□□□□ -1.7
CHD6-202ENST00000373222 DAZ4Q86SG3 579 aaKnown RBP4.45□□□□□ -1.7
CHD6-202ENST00000373222 DAZ3Q9NR90 486 aaKnown RBP4.45□□□□□ -1.7
CHD6-202ENST00000373222 FAM240AA0A1B0GVK7 77 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 UBE2L6O14933 153 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 RPL18AQ02543 176 aaKnown RBP4.44□□□□□ -1.7
CHD6-202ENST00000373222 ATXN8Q156A1 80 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 C16orf74Q96GX8 76 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 TMEM243Q9BU79 118 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 NBEAL1Q6ZS30 2694 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 TRBV10-1A0A0K0K1A3 114 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 C5orf38Q86SI9 138 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 CHCHD5Q9BSY4 110 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
CHD6-202ENST00000373222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
CHD6-202ENST00000373222 J3QKU1 62 aa4.43□□□□□ -1.7
CHD6-202ENST00000373222 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
CHD6-202ENST00000373222 C16orf95Q9H693 158 aa4.43□□□□□ -1.7
CHD6-202ENST00000373222 APOC4P55056 127 aa4.43□□□□□ -1.7
CHD6-202ENST00000373222 C1orf195Q5TG92 126 aa4.43□□□□□ -1.7
CHD6-202ENST00000373222 TRBV6-8A0A0A6YYG3 113 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 LST1O00453 97 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 PFN2P35080 140 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
CHD6-202ENST00000373222 TRAV8-4A0A0B4J246 113 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 TRBV6-4A0A1B0GX49 114 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 LY6G6DO95868 133 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 DEFB135Q30KP9 77 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 LINC00337Q8N6G1 96 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 IGKV2-28A0A075B6P5 120 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 INAFM1C9JVW0 142 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 TIMM17BO60830 172 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 IGKV2D-28P01615 120 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 XCL1P47992 114 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 CIRBPQ14011 172 aaKnown RBP4.41□□□□□ -1.7
CHD6-202ENST00000373222 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 COL6A5A8TX70 2615 aa4.41□□□□□ -1.7
CHD6-202ENST00000373222 IGHV3OR16-9A0A0B4J2B5 98 aa4.4□□□□□ -1.7
CHD6-202ENST00000373222 CKS1BP61024 79 aa4.4□□□□□ -1.7
CHD6-202ENST00000373222 TTC32Q5I0X7 151 aa4.4□□□□□ -1.7
CHD6-202ENST00000373222 COX7B2Q8TF08 81 aa4.4□□□□□ -1.7
CHD6-202ENST00000373222 UBE2WQ96B02 151 aa4.4□□□□□ -1.7
CHD6-202ENST00000373222 IGLV10-54A0A075B6I4 117 aa4.4□□□□□ -1.71
CHD6-202ENST00000373222 TMEM262E9PQX1 116 aa4.4□□□□□ -1.71
CHD6-202ENST00000373222 IFITM1P13164 125 aa4.4□□□□□ -1.71
CHD6-202ENST00000373222 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms