RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 C5orf42Q9H799 3197 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 LINC00315P59091 139 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 VPS13AQ96RL7 3174 aa7.45□□□□□ -1.22
NUP188-201ENST00000372577 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.44□□□□□ -1.22
NUP188-201ENST00000372577 NDUFC1O43677 76 aa7.44□□□□□ -1.22
NUP188-201ENST00000372577 SORL1Q92673 2214 aa7.44□□□□□ -1.22
NUP188-201ENST00000372577 Q8N814 137 aa7.44□□□□□ -1.22
NUP188-201ENST00000372577 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
NUP188-201ENST00000372577 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
NUP188-201ENST00000372577 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
NUP188-201ENST00000372577 PTPRBP23467 1997 aa7.43□□□□□ -1.22
NUP188-201ENST00000372577 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
NUP188-201ENST00000372577 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
NUP188-201ENST00000372577 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
NUP188-201ENST00000372577 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
NUP188-201ENST00000372577 MYO9AB2RTY4 2548 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 COL27A1Q8IZC6 1860 aaPredicted RBP7.41□□□□□ -1.22
NUP188-201ENST00000372577 Q6ZTC4 211 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 USP17L23D6RBM5 183 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 FSHBP01225 129 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 BRK1Q8WUW1 75 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 XGP55808 180 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 LYPD5Q6UWN5 251 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
NUP188-201ENST00000372577 ANKRD11Q6UB99 2663 aaPredicted RBP7.4□□□□□ -1.22
NUP188-201ENST00000372577 LRCOL1A6NCL2 159 aa7.4□□□□□ -1.22
NUP188-201ENST00000372577 TRBV10-3A0A0K0K1G6 114 aa7.4□□□□□ -1.23
NUP188-201ENST00000372577 RETNQ9HD89 108 aa7.39□□□□□ -1.23
NUP188-201ENST00000372577 SCXQ7RTU7 201 aa7.39□□□□□ -1.23
NUP188-201ENST00000372577 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 COX7CP15954 63 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 C3orf84H3BNL1 204 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 VPREB1P12018 145 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 C2CD3Q4AC94 2353 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 C1orf195Q5TG92 126 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
NUP188-201ENST00000372577 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
NUP188-201ENST00000372577 PRYO14603 147 aa7.37□□□□□ -1.23
NUP188-201ENST00000372577 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
NUP188-201ENST00000372577 A0A096LNI7 61 aa7.37□□□□□ -1.23
NUP188-201ENST00000372577 H3BNG1 76 aa7.37□□□□□ -1.23
NUP188-201ENST00000372577 A0A087WYN8 130 aa7.36□□□□□ -1.23
NUP188-201ENST00000372577 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
NUP188-201ENST00000372577 CHD9Q3L8U1 2897 aa7.36□□□□□ -1.23
NUP188-201ENST00000372577 IGHV3OR16-9A0A0B4J2B5 98 aa7.36□□□□□ -1.23
NUP188-201ENST00000372577 A0A0U1RQV1 116 aa7.35□□□□□ -1.23
NUP188-201ENST00000372577 C10orf25Q5T742 122 aa7.34□□□□□ -1.23
NUP188-201ENST00000372577 MYO18BQ8IUG5 2567 aa7.34□□□□□ -1.23
NUP188-201ENST00000372577 FRYLO94915 3013 aa7.34□□□□□ -1.23
NUP188-201ENST00000372577 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
NUP188-201ENST00000372577 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.23
NUP188-201ENST00000372577 C6orf223Q8N319 242 aa7.34□□□□□ -1.23
NUP188-201ENST00000372577 ABCA2Q9BZC7 2435 aa7.33□□□□□ -1.24
NUP188-201ENST00000372577 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
NUP188-201ENST00000372577 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
NUP188-201ENST00000372577 M0R2N4 97 aa7.32□□□□□ -1.24
NUP188-201ENST00000372577 LINC01556Q5JQF7 62 aa7.32□□□□□ -1.24
NUP188-201ENST00000372577 PPDPFQ9H3Y8 114 aa7.32□□□□□ -1.24
NUP188-201ENST00000372577 AGRNO00468 2067 aa7.32□□□□□ -1.24
NUP188-201ENST00000372577 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
NUP188-201ENST00000372577 PRR3P79522 188 aaKnown RBP7.31□□□□□ -1.24
NUP188-201ENST00000372577 LINC00337Q8N6G1 96 aa7.31□□□□□ -1.24
NUP188-201ENST00000372577 LY6G6CO95867 125 aa7.31□□□□□ -1.24
NUP188-201ENST00000372577 USP9XQ93008 2570 aaPredicted RBP7.31□□□□□ -1.24
NUP188-201ENST00000372577 A8MTW9 85 aa7.31□□□□□ -1.24
NUP188-201ENST00000372577 X6R8D5 127 aa7.3□□□□□ -1.24
NUP188-201ENST00000372577 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
NUP188-201ENST00000372577 Q6ZRU5 148 aa7.3□□□□□ -1.24
NUP188-201ENST00000372577 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
NUP188-201ENST00000372577 SPTBN5Q9NRC6 3674 aaKnown RBP7.29□□□□□ -1.24
NUP188-201ENST00000372577 DOPEY1Q5JWR5 2465 aa7.28□□□□□ -1.24
NUP188-201ENST00000372577 TRBV7-6A0A0J9YX20 115 aa7.28□□□□□ -1.24
NUP188-201ENST00000372577 ABCA12Q86UK0 2595 aa7.28□□□□□ -1.24
NUP188-201ENST00000372577 WFDC13Q8IUB5 93 aa7.28□□□□□ -1.24
NUP188-201ENST00000372577 CCDC179H3BU77 68 aa7.27□□□□□ -1.24
NUP188-201ENST00000372577 TRANK1O15050 2925 aa7.27□□□□□ -1.25
NUP188-201ENST00000372577 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
NUP188-201ENST00000372577 DNAH14Q0VDD8 3507 aa7.26□□□□□ -1.25
NUP188-201ENST00000372577 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
NUP188-201ENST00000372577 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
NUP188-201ENST00000372577 TRBV7-7A0A0K0K1E9 115 aa7.25□□□□□ -1.25
NUP188-201ENST00000372577 SBSPONQ8IVN8 264 aa7.25□□□□□ -1.25
NUP188-201ENST00000372577 A0A1B0GW54 56 aa7.25□□□□□ -1.25
NUP188-201ENST00000372577 USP9YO00507 2555 aaPredicted RBP7.25□□□□□ -1.25
NUP188-201ENST00000372577 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
NUP188-201ENST00000372577 Q9BRP9 147 aa7.24□□□□□ -1.25
NUP188-201ENST00000372577 A0A096LNT2 108 aa7.24□□□□□ -1.25
NUP188-201ENST00000372577 CXCL6P80162 114 aa7.24□□□□□ -1.25
NUP188-201ENST00000372577 ESRGQ1W209 222 aa7.24□□□□□ -1.25
NUP188-201ENST00000372577 SPINK6Q6UWN8 80 aa7.23□□□□□ -1.25
NUP188-201ENST00000372577 Q8NAQ8 132 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms