RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 Q8IZM0 81 aa10.43□□□□□ -0.74
LRRC42-202ENST00000371368 SCGB3A1Q96QR1 104 aa10.43□□□□□ -0.74
LRRC42-202ENST00000371368 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
LRRC42-202ENST00000371368 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
LRRC42-202ENST00000371368 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
LRRC42-202ENST00000371368 M0QXV9 152 aa10.42□□□□□ -0.74
LRRC42-202ENST00000371368 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
LRRC42-202ENST00000371368 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
LRRC42-202ENST00000371368 UBE2BP63146 152 aa10.4□□□□□ -0.74
LRRC42-202ENST00000371368 COMMD7Q86VX2 200 aa10.4□□□□□ -0.74
LRRC42-202ENST00000371368 DIRC1Q969H9 104 aa10.4□□□□□ -0.74
LRRC42-202ENST00000371368 COX19Q49B96 90 aa10.39□□□□□ -0.75
LRRC42-202ENST00000371368 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
LRRC42-202ENST00000371368 C10orf91Q5T1B1 145 aa10.38□□□□□ -0.75
LRRC42-202ENST00000371368 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
LRRC42-202ENST00000371368 TINCRA0A1B0GVN0 87 aa10.37□□□□□ -0.75
LRRC42-202ENST00000371368 F8VRH5 84 aa10.37□□□□□ -0.75
LRRC42-202ENST00000371368 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
LRRC42-202ENST00000371368 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
LRRC42-202ENST00000371368 H0Y9J4 135 aa10.36□□□□□ -0.75
LRRC42-202ENST00000371368 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
LRRC42-202ENST00000371368 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
LRRC42-202ENST00000371368 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
LRRC42-202ENST00000371368 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
LRRC42-202ENST00000371368 CXCL5P42830 114 aa10.35□□□□□ -0.75
LRRC42-202ENST00000371368 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
LRRC42-202ENST00000371368 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
LRRC42-202ENST00000371368 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
LRRC42-202ENST00000371368 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
LRRC42-202ENST00000371368 RHEBQ15382 184 aa10.34□□□□□ -0.75
LRRC42-202ENST00000371368 PRR26Q8N8Z3 221 aa10.34□□□□□ -0.75
LRRC42-202ENST00000371368 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
LRRC42-202ENST00000371368 SMCO4Q9NRQ5 59 aa10.34□□□□□ -0.75
LRRC42-202ENST00000371368 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
LRRC42-202ENST00000371368 PMVKQ15126 192 aa10.33□□□□□ -0.76
LRRC42-202ENST00000371368 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
LRRC42-202ENST00000371368 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
LRRC42-202ENST00000371368 KRTAP1-4P0C5Y4 121 aa10.29□□□□□ -0.76
LRRC42-202ENST00000371368 LRP2P98164 4655 aa10.29□□□□□ -0.76
LRRC42-202ENST00000371368 IGLV1-50A0A075B6I6 118 aa10.28□□□□□ -0.76
LRRC42-202ENST00000371368 NUPR1O60356 82 aa10.28□□□□□ -0.76
LRRC42-202ENST00000371368 RAB5BP61020 215 aa10.28□□□□□ -0.76
LRRC42-202ENST00000371368 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
LRRC42-202ENST00000371368 TRAPPC1Q9Y5R8 145 aa10.28□□□□□ -0.76
LRRC42-202ENST00000371368 A0A096LNJ9 63 aa10.27□□□□□ -0.77
LRRC42-202ENST00000371368 H3BRM9 83 aa10.27□□□□□ -0.77
LRRC42-202ENST00000371368 ZNF861PO60384 105 aa10.27□□□□□ -0.77
LRRC42-202ENST00000371368 MRPL55Q7Z7F7 128 aaKnown RBP10.27□□□□□ -0.77
LRRC42-202ENST00000371368 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
LRRC42-202ENST00000371368 LINC00614P0C842 121 aa10.26□□□□□ -0.77
LRRC42-202ENST00000371368 NDUFA6P56556 154 aa10.26□□□□□ -0.77
LRRC42-202ENST00000371368 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
LRRC42-202ENST00000371368 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
LRRC42-202ENST00000371368 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
LRRC42-202ENST00000371368 APOC3P02656 99 aa10.24□□□□□ -0.77
LRRC42-202ENST00000371368 HBDP02042 147 aa10.23□□□□□ -0.77
LRRC42-202ENST00000371368 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
LRRC42-202ENST00000371368 RPL37AP8A6NKH3 93 aa10.22□□□□□ -0.77
LRRC42-202ENST00000371368 BCE1O60756 84 aa10.22□□□□□ -0.77
LRRC42-202ENST00000371368 ATP5LO75964 103 aa10.22□□□□□ -0.77
LRRC42-202ENST00000371368 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
LRRC42-202ENST00000371368 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.77
LRRC42-202ENST00000371368 GAGE10A6NGK3 116 aa10.21□□□□□ -0.77
LRRC42-202ENST00000371368 SNAPINO95295 136 aa10.21□□□□□ -0.77
LRRC42-202ENST00000371368 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
LRRC42-202ENST00000371368 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
LRRC42-202ENST00000371368 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
LRRC42-202ENST00000371368 PFN2P35080 140 aa10.19□□□□□ -0.78
LRRC42-202ENST00000371368 NDUFA5Q16718 116 aa10.19□□□□□ -0.78
LRRC42-202ENST00000371368 BAGE3Q86Y29 109 aa10.19□□□□□ -0.78
LRRC42-202ENST00000371368 SVBPQ8N300 66 aa10.19□□□□□ -0.78
LRRC42-202ENST00000371368 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
LRRC42-202ENST00000371368 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
LRRC42-202ENST00000371368 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
LRRC42-202ENST00000371368 SCO1O75880 301 aa10.15□□□□□ -0.78
LRRC42-202ENST00000371368 TMEM170BQ5T4T1 132 aa10.15□□□□□ -0.78
LRRC42-202ENST00000371368 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
LRRC42-202ENST00000371368 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
LRRC42-202ENST00000371368 COX17Q14061 63 aa10.14□□□□□ -0.79
LRRC42-202ENST00000371368 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
LRRC42-202ENST00000371368 CHTOPQ9Y3Y2 248 aaKnown RBP10.14□□□□□ -0.79
LRRC42-202ENST00000371368 LPAP08519 4548 aa10.13□□□□□ -0.79
LRRC42-202ENST00000371368 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
LRRC42-202ENST00000371368 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
LRRC42-202ENST00000371368 VPREB1P12018 145 aa10.12□□□□□ -0.79
LRRC42-202ENST00000371368 UBE2AP49459 152 aa10.12□□□□□ -0.79
LRRC42-202ENST00000371368 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
LRRC42-202ENST00000371368 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
LRRC42-202ENST00000371368 A0A087X002 238 aa10.11□□□□□ -0.79
LRRC42-202ENST00000371368 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
LRRC42-202ENST00000371368 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
LRRC42-202ENST00000371368 CRYGAP11844 174 aa10.1□□□□□ -0.79
LRRC42-202ENST00000371368 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
LRRC42-202ENST00000371368 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
LRRC42-202ENST00000371368 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
LRRC42-202ENST00000371368 TMEM223A0PJW6 202 aa10.08□□□□□ -0.8
LRRC42-202ENST00000371368 PRR4Q16378 134 aa10.08□□□□□ -0.8
LRRC42-202ENST00000371368 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
LRRC42-202ENST00000371368 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
LRRC42-202ENST00000371368 TSPAN13O95857 204 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms