RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 CAMK2N2Q96S95 79 aa6.94□□□□□ -1.3
EXOSC1-203ENST00000370886 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
EXOSC1-203ENST00000370886 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 PRSS2P07478 247 aa6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 SNRPEP62304 92 aaKnown RBP6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 SYCNQ0VAF6 134 aa6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 DPH3Q96FX2 82 aa6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
EXOSC1-203ENST00000370886 H3BRM9 83 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 HAMPP81172 84 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 OR10D4PQ8NGN7 298 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 CARD19Q96LW7 228 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 MAP1LC3CQ9BXW4 147 aa6.92□□□□□ -1.3
EXOSC1-203ENST00000370886 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 C6orf226Q5I0X4 101 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 Q6ZRU5 148 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 C9orf163Q8N9P6 203 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
EXOSC1-203ENST00000370886 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.3
EXOSC1-203ENST00000370886 CKS1BP61024 79 aa6.9□□□□□ -1.3
EXOSC1-203ENST00000370886 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
EXOSC1-203ENST00000370886 C2orf48Q96LS8 159 aa6.9□□□□□ -1.3
EXOSC1-203ENST00000370886 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
EXOSC1-203ENST00000370886 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 F8VRH5 84 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 NDUFA1O15239 70 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 COA6Q5JTJ3 125 aaKnown RBP6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 UNQ6190/PRO20217Q6UXQ8 127 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 LINC01561Q8N1V8 128 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 C14orf144Q96I85 54 aa6.89□□□□□ -1.31
EXOSC1-203ENST00000370886 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 SMIM1B2RUZ4 78 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 DDTP30046 118 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 KRTDAPP60985 99 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 ODF1Q14990 250 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 SVIPQ8NHG7 77 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
EXOSC1-203ENST00000370886 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
EXOSC1-203ENST00000370886 GAGE2BQ13066 116 aa6.87□□□□□ -1.31
EXOSC1-203ENST00000370886 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
EXOSC1-203ENST00000370886 SYS1-DBNDD2H3BUS1 97 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 DPM2O94777 84 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 PCP4P48539 62 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 MAJINQ3KP22 176 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 Q8IZM0 81 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
EXOSC1-203ENST00000370886 A0A1B0GV90 55 aa6.85□□□□□ -1.31
EXOSC1-203ENST00000370886 F8WDY8 70 aa6.85□□□□□ -1.31
EXOSC1-203ENST00000370886 PANO1I0J062 215 aa6.85□□□□□ -1.31
EXOSC1-203ENST00000370886 PLNP26678 52 aa6.85□□□□□ -1.31
EXOSC1-203ENST00000370886 C9orf116Q5BN46 136 aaPredicted RBP6.85□□□□□ -1.31
EXOSC1-203ENST00000370886 A0A096LNI7 61 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 IGKCP01834 107 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 C3orf79P0CE67 100 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
EXOSC1-203ENST00000370886 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
EXOSC1-203ENST00000370886 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
EXOSC1-203ENST00000370886 SCXQ7RTU7 201 aa6.83□□□□□ -1.32
EXOSC1-203ENST00000370886 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
EXOSC1-203ENST00000370886 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
EXOSC1-203ENST00000370886 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 IGLV5-39A0A0G2JS06 123 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 CXCL5P42830 114 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 HERVK_113P61574 105 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 Q6ZSA8 131 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 CIRBP-AS1Q8TBR5 109 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
EXOSC1-203ENST00000370886 C20orf202A1L168 122 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 PYY3Q5JQD4 70 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 STPG4Q8N801 248 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
EXOSC1-203ENST00000370886 A0A087WYN8 130 aa6.8□□□□□ -1.32
EXOSC1-203ENST00000370886 M0R143 59 aa6.8□□□□□ -1.32
EXOSC1-203ENST00000370886 PFN2P35080 140 aa6.8□□□□□ -1.32
EXOSC1-203ENST00000370886 Q6ZRP5 223 aa6.8□□□□□ -1.32
EXOSC1-203ENST00000370886 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
EXOSC1-203ENST00000370886 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
EXOSC1-203ENST00000370886 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms