RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 LECT2O14960 151 aa11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 WFDC10AQ9H1F0 79 aa11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 FLNAP21333 2647 aaKnown RBP11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 MPLKIPQ8TAP9 179 aa11.31□□□□□ -0.6
SYNCRIP-202ENST00000369622 RMI2Q96E14 147 aa11.31□□□□□ -0.6
SYNCRIP-202ENST00000369622 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
SYNCRIP-202ENST00000369622 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
SYNCRIP-202ENST00000369622 LOC100131303A0A0U1RQF7 123 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 A8MTW9 85 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 FSHBP01225 129 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 K7EQD1 137 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 NDUFC2O95298 119 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 SMIM1B2RUZ4 78 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 RBM3P98179 157 aaKnown RBP11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 FAM222AQ5U5X8 452 aa11.3□□□□□ -0.6
SYNCRIP-202ENST00000369622 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-202ENST00000369622 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
SYNCRIP-202ENST00000369622 C16orf95Q9H693 158 aa11.29□□□□□ -0.6
SYNCRIP-202ENST00000369622 CCL24O00175 119 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 SERP1Q9Y6X1 66 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 CR1P17927 2039 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 H7BZZ5 65 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 DEFB113Q30KQ7 82 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
SYNCRIP-202ENST00000369622 APCP25054 2843 aa11.27□□□□□ -0.61
SYNCRIP-202ENST00000369622 TIMM17BO60830 172 aa11.27□□□□□ -0.61
SYNCRIP-202ENST00000369622 CRPP02741 224 aa11.27□□□□□ -0.61
SYNCRIP-202ENST00000369622 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.61
SYNCRIP-202ENST00000369622 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
SYNCRIP-202ENST00000369622 NBEAL2Q6ZNJ1 2754 aa11.26□□□□□ -0.61
SYNCRIP-202ENST00000369622 AKAP9Q99996 3911 aa11.26□□□□□ -0.61
SYNCRIP-202ENST00000369622 SMIM11BQ8TCY0 68 aa11.26□□□□□ -0.61
SYNCRIP-202ENST00000369622 CDC42SE2Q9NRR3 84 aa11.26□□□□□ -0.61
SYNCRIP-202ENST00000369622 F8WEM9 126 aa11.25□□□□□ -0.61
SYNCRIP-202ENST00000369622 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
SYNCRIP-202ENST00000369622 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
SYNCRIP-202ENST00000369622 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
SYNCRIP-202ENST00000369622 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
SYNCRIP-202ENST00000369622 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
SYNCRIP-202ENST00000369622 S100A7L2Q5SY68 101 aa11.23□□□□□ -0.61
SYNCRIP-202ENST00000369622 LINC00158P58513 81 aa11.22□□□□□ -0.61
SYNCRIP-202ENST00000369622 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
SYNCRIP-202ENST00000369622 SMIM26A0A096LP01 95 aa11.21□□□□□ -0.61
SYNCRIP-202ENST00000369622 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
SYNCRIP-202ENST00000369622 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
SYNCRIP-202ENST00000369622 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
SYNCRIP-202ENST00000369622 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
SYNCRIP-202ENST00000369622 COPS9Q8WXC6 57 aa11.2□□□□□ -0.62
SYNCRIP-202ENST00000369622 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 TRAV10A0A0B4J240 114 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 ESM1Q9NQ30 184 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
SYNCRIP-202ENST00000369622 IGLV4-60A0A075B6I1 120 aa11.18□□□□□ -0.62
SYNCRIP-202ENST00000369622 NOTCH2Q04721 2471 aa11.18□□□□□ -0.62
SYNCRIP-202ENST00000369622 FAM229BQ4G0N7 80 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 CCKP06307 115 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 HAMPP81172 84 aa11.17□□□□□ -0.62
SYNCRIP-202ENST00000369622 A0A096LPF7 62 aa11.16□□□□□ -0.62
SYNCRIP-202ENST00000369622 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
SYNCRIP-202ENST00000369622 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
SYNCRIP-202ENST00000369622 UBR5O95071 2799 aaPredicted RBP11.16□□□□□ -0.62
SYNCRIP-202ENST00000369622 PAX4O43316 350 aa11.15□□□□□ -0.62
SYNCRIP-202ENST00000369622 EPM2AB3EWF7 344 aa11.14□□□□□ -0.63
SYNCRIP-202ENST00000369622 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
SYNCRIP-202ENST00000369622 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
SYNCRIP-202ENST00000369622 ORMDL1Q9P0S3 153 aa11.14□□□□□ -0.63
SYNCRIP-202ENST00000369622 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
SYNCRIP-202ENST00000369622 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
SYNCRIP-202ENST00000369622 PLAC8L1A1L4L8 177 aa11.12□□□□□ -0.63
SYNCRIP-202ENST00000369622 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 OBSCN-AS1Q96MR7 158 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 A0A087WZ39 114 aa11.11□□□□□ -0.63
SYNCRIP-202ENST00000369622 TRBV6-4A0A1B0GX49 114 aa11.1□□□□□ -0.63
SYNCRIP-202ENST00000369622 M0R2N4 97 aa11.1□□□□□ -0.63
SYNCRIP-202ENST00000369622 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
SYNCRIP-202ENST00000369622 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 CCL18P55774 89 aa11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 FAM19A3Q7Z5A8 133 aa11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 TM2D3Q9BRN9 247 aa11.09□□□□□ -0.63
SYNCRIP-202ENST00000369622 IGHV3OR16-9A0A0B4J2B5 98 aa11.07□□□□□ -0.64
SYNCRIP-202ENST00000369622 H0YGX0 51 aa11.07□□□□□ -0.64
SYNCRIP-202ENST00000369622 GYPEP15421 78 aa11.07□□□□□ -0.64
SYNCRIP-202ENST00000369622 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms