RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 LY6G6CO95867 125 aa9.84□□□□□ -0.83
SEMA6C-204ENST00000368914 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
SEMA6C-204ENST00000368914 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
SEMA6C-204ENST00000368914 EDA2RQ9HAV5 297 aa9.83□□□□□ -0.84
SEMA6C-204ENST00000368914 LEPROTO15243 131 aa9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 SPAG11BQ08648 103 aa9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
SEMA6C-204ENST00000368914 TRBV20-1A0A075B6N2 111 aa9.81□□□□□ -0.84
SEMA6C-204ENST00000368914 COX6CP09669 75 aa9.81□□□□□ -0.84
SEMA6C-204ENST00000368914 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
SEMA6C-204ENST00000368914 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
SEMA6C-204ENST00000368914 B9D2Q9BPU9 175 aa9.81□□□□□ -0.84
SEMA6C-204ENST00000368914 SCGB1A1P11684 91 aa9.8□□□□□ -0.84
SEMA6C-204ENST00000368914 MUSTN1Q8IVN3 82 aa9.8□□□□□ -0.84
SEMA6C-204ENST00000368914 TM2D3Q9BRN9 247 aa9.8□□□□□ -0.84
SEMA6C-204ENST00000368914 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
SEMA6C-204ENST00000368914 AMELXQ99217 191 aa9.79□□□□□ -0.84
SEMA6C-204ENST00000368914 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
SEMA6C-204ENST00000368914 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
SEMA6C-204ENST00000368914 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
SEMA6C-204ENST00000368914 C9JAW5 83 aa9.78□□□□□ -0.84
SEMA6C-204ENST00000368914 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
SEMA6C-204ENST00000368914 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
SEMA6C-204ENST00000368914 A4D1N5 150 aa9.77□□□□□ -0.85
SEMA6C-204ENST00000368914 MT-ATP8P03928 68 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 LINC00588Q9Y4M8 146 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 LINC00612Q8N6U2 182 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 FOXI1Q12951 378 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
SEMA6C-204ENST00000368914 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
SEMA6C-204ENST00000368914 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
SEMA6C-204ENST00000368914 LINC01546A6NGU7 62 aa9.74□□□□□ -0.85
SEMA6C-204ENST00000368914 SMIM20Q8N5G0 67 aa9.74□□□□□ -0.85
SEMA6C-204ENST00000368914 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
SEMA6C-204ENST00000368914 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
SEMA6C-204ENST00000368914 TIRAPP58753 221 aa9.73□□□□□ -0.85
SEMA6C-204ENST00000368914 H7C423 109 aa9.73□□□□□ -0.85
SEMA6C-204ENST00000368914 HIGD1BQ9P298 99 aa9.72□□□□□ -0.85
SEMA6C-204ENST00000368914 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
SEMA6C-204ENST00000368914 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
SEMA6C-204ENST00000368914 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.86
SEMA6C-204ENST00000368914 TSPAN13O95857 204 aa9.71□□□□□ -0.86
SEMA6C-204ENST00000368914 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 MIAQ16674 131 aa9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 A0A1B0GUV1 79 aa9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 TAL2Q16559 108 aa9.7□□□□□ -0.86
SEMA6C-204ENST00000368914 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
SEMA6C-204ENST00000368914 NHLRC4P0CG21 123 aaPredicted RBP9.69□□□□□ -0.86
SEMA6C-204ENST00000368914 ENHOQ6UWT2 76 aa9.69□□□□□ -0.86
SEMA6C-204ENST00000368914 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
SEMA6C-204ENST00000368914 NCR3O14931 201 aa9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 SLC25A20O43772 301 aa9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 NDUFA1O15239 70 aa9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 RMI2Q96E14 147 aa9.68□□□□□ -0.86
SEMA6C-204ENST00000368914 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
SEMA6C-204ENST00000368914 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
SEMA6C-204ENST00000368914 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
SEMA6C-204ENST00000368914 A0A087WZ39 114 aa9.67□□□□□ -0.86
SEMA6C-204ENST00000368914 DNAL4O96015 105 aa9.66□□□□□ -0.86
SEMA6C-204ENST00000368914 XGP55808 180 aa9.66□□□□□ -0.86
SEMA6C-204ENST00000368914 IFITM1P13164 125 aa9.65□□□□□ -0.86
SEMA6C-204ENST00000368914 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
SEMA6C-204ENST00000368914 ANKRD29Q8N6D5 301 aa9.65□□□□□ -0.86
SEMA6C-204ENST00000368914 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.86
SEMA6C-204ENST00000368914 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
SEMA6C-204ENST00000368914 HERV-K104P63124 156 aa9.64□□□□□ -0.87
SEMA6C-204ENST00000368914 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
SEMA6C-204ENST00000368914 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
SEMA6C-204ENST00000368914 TCL1BO95988 128 aa9.61□□□□□ -0.87
SEMA6C-204ENST00000368914 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
SEMA6C-204ENST00000368914 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
SEMA6C-204ENST00000368914 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
SEMA6C-204ENST00000368914 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
SEMA6C-204ENST00000368914 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
SEMA6C-204ENST00000368914 CFC1BP0CG36 223 aa9.59□□□□□ -0.87
SEMA6C-204ENST00000368914 CFC1P0CG37 223 aa9.59□□□□□ -0.87
SEMA6C-204ENST00000368914 Q6ZRU5 148 aa9.59□□□□□ -0.87
SEMA6C-204ENST00000368914 MEGF8Q7Z7M0 2845 aa9.59□□□□□ -0.87
SEMA6C-204ENST00000368914 H3BNG1 76 aa9.58□□□□□ -0.88
SEMA6C-204ENST00000368914 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
SEMA6C-204ENST00000368914 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
SEMA6C-204ENST00000368914 DNAH10OSP0CZ25 163 aa9.57□□□□□ -0.88
SEMA6C-204ENST00000368914 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms