RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RPL18AQ02543 176 aaKnown RBP14.09□□□□□ -0.15
ECHDC1-203ENST00000368291 PACRGQ96M98 296 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-203ENST00000368291 IGLC3P0DOY3 106 aa14.09□□□□□ -0.15
ECHDC1-203ENST00000368291 NDUFA6P56556 154 aa14.09□□□□□ -0.15
ECHDC1-203ENST00000368291 TRBV30A0A0K0K1B3 111 aa14.08□□□□□ -0.16
ECHDC1-203ENST00000368291 PRSS2P07478 247 aa14.08□□□□□ -0.16
ECHDC1-203ENST00000368291 LINC00310P59036 64 aa14.08□□□□□ -0.16
ECHDC1-203ENST00000368291 Q6ZRP5 223 aa14.08□□□□□ -0.16
ECHDC1-203ENST00000368291 A0A1W2PNN7 141 aa14.07□□□□□ -0.16
ECHDC1-203ENST00000368291 C6orf226Q5I0X4 101 aa14.07□□□□□ -0.16
ECHDC1-203ENST00000368291 BAGE3Q86Y29 109 aa14.07□□□□□ -0.16
ECHDC1-203ENST00000368291 C9orf116Q5BN46 136 aaPredicted RBP14.06□□□□□ -0.16
ECHDC1-203ENST00000368291 FAM19A2Q8N3H0 131 aa14.06□□□□□ -0.16
ECHDC1-203ENST00000368291 SPINK8P0C7L1 97 aa14.05□□□□□ -0.16
ECHDC1-203ENST00000368291 MYCBP2O75592 4640 aa14.04□□□□□ -0.16
ECHDC1-203ENST00000368291 HSBP1O75506 76 aa14.04□□□□□ -0.16
ECHDC1-203ENST00000368291 HNRNPA3P51991 378 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-203ENST00000368291 CKS1BP61024 79 aa14.04□□□□□ -0.16
ECHDC1-203ENST00000368291 SERF1AO75920 110 aa14.03□□□□□ -0.16
ECHDC1-203ENST00000368291 ZNF22P17026 224 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-203ENST00000368291 COX7B2Q8TF08 81 aa14.02□□□□□ -0.17
ECHDC1-203ENST00000368291 IFI27L1Q96BM0 104 aa14.02□□□□□ -0.17
ECHDC1-203ENST00000368291 C11orf86A6NJI1 115 aa14.01□□□□□ -0.17
ECHDC1-203ENST00000368291 NUPR1O60356 82 aa14.01□□□□□ -0.17
ECHDC1-203ENST00000368291 C7orf33Q8WU49 177 aa14.01□□□□□ -0.17
ECHDC1-203ENST00000368291 NDUFC2-KCTD14E9PQ53 114 aa14□□□□□ -0.17
ECHDC1-203ENST00000368291 H3BRM9 83 aa14□□□□□ -0.17
ECHDC1-203ENST00000368291 GAGE2EQ4V326 116 aa14□□□□□ -0.17
ECHDC1-203ENST00000368291 GAGE2DQ9UEU5 116 aa14□□□□□ -0.17
ECHDC1-203ENST00000368291 IGLV5-39A0A0G2JS06 123 aa13.99□□□□□ -0.17
ECHDC1-203ENST00000368291 F8VRH5 84 aa13.99□□□□□ -0.17
ECHDC1-203ENST00000368291 CXCL5P42830 114 aa13.99□□□□□ -0.17
ECHDC1-203ENST00000368291 TRAV12-1A0A0B4J245 112 aa13.98□□□□□ -0.17
ECHDC1-203ENST00000368291 FAM168BA1KXE4 195 aa13.98□□□□□ -0.17
ECHDC1-203ENST00000368291 CHTOPQ9Y3Y2 248 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-203ENST00000368291 KRTAP7-1Q8IUC3 87 aa13.97□□□□□ -0.17
ECHDC1-203ENST00000368291 C9orf129Q5T035 196 aaKnown RBP13.96□□□□□ -0.18
ECHDC1-203ENST00000368291 PRR3P79522 188 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-203ENST00000368291 TMEM170BQ5T4T1 132 aa13.94□□□□□ -0.18
ECHDC1-203ENST00000368291 PHF5AQ7RTV0 110 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BKO60814 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 LEPROTL1O95214 131 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BJP06899 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BOP23527 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BBP33778 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BDP58876 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BCP62807 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST2H2BEQ16778 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BHQ93079 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BNQ99877 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 HIST1H2BMQ99879 126 aa13.93□□□□□ -0.18
ECHDC1-203ENST00000368291 LRP1Q07954 4544 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-203ENST00000368291 FAM19A5Q7Z5A7 132 aaPredicted RBP13.91□□□□□ -0.18
ECHDC1-203ENST00000368291 FAT3Q8TDW7 4589 aa13.9□□□□□ -0.18
ECHDC1-203ENST00000368291 ODF1Q14990 250 aa13.9□□□□□ -0.18
ECHDC1-203ENST00000368291 KRTAP29-1A8MX34 341 aaPredicted RBP13.89□□□□□ -0.19
ECHDC1-203ENST00000368291 XAGE1AQ9HD64 81 aa13.89□□□□□ -0.19
ECHDC1-203ENST00000368291 TMEM223A0PJW6 202 aa13.88□□□□□ -0.19
ECHDC1-203ENST00000368291 FABP4P15090 132 aa13.88□□□□□ -0.19
ECHDC1-203ENST00000368291 H0Y8G0 127 aa13.87□□□□□ -0.19
ECHDC1-203ENST00000368291 KRTAP11-1Q8IUC1 163 aa13.87□□□□□ -0.19
ECHDC1-203ENST00000368291 SERTAD4-AS1Q5TG53 156 aa13.86□□□□□ -0.19
ECHDC1-203ENST00000368291 HSPB8Q9UJY1 196 aa13.86□□□□□ -0.19
ECHDC1-203ENST00000368291 PSORS1C2Q9UIG4 136 aa13.85□□□□□ -0.19
ECHDC1-203ENST00000368291 DMBT1Q9UGM3 2413 aaPredicted RBP13.85□□□□□ -0.19
ECHDC1-203ENST00000368291 M0QXV9 152 aa13.84□□□□□ -0.19
ECHDC1-203ENST00000368291 ZNF625Q96I27 306 aaPredicted RBP13.83□□□□□ -0.19
ECHDC1-203ENST00000368291 OXTP01178 125 aa13.82□□□□□ -0.2
ECHDC1-203ENST00000368291 SRSF9Q13242 221 aaKnown RBP eCLIP13.81□□□□□ -0.2
ECHDC1-203ENST00000368291 ATP6V1G1O75348 118 aa13.8□□□□□ -0.2
ECHDC1-203ENST00000368291 S100A1P23297 94 aa13.8□□□□□ -0.2
ECHDC1-203ENST00000368291 PFN2P35080 140 aa13.8□□□□□ -0.2
ECHDC1-203ENST00000368291 PMCHL2Q9BQD1 86 aa13.8□□□□□ -0.2
ECHDC1-203ENST00000368291 ERG28Q9UKR5 140 aa13.8□□□□□ -0.2
ECHDC1-203ENST00000368291 J3QL48 77 aa13.79□□□□□ -0.2
ECHDC1-203ENST00000368291 C22orf24Q9Y442 160 aa13.79□□□□□ -0.2
ECHDC1-203ENST00000368291 COA6Q5JTJ3 125 aaKnown RBP13.78□□□□□ -0.2
ECHDC1-203ENST00000368291 C1orf137Q5JT78 98 aa13.77□□□□□ -0.21
ECHDC1-203ENST00000368291 SFTA2Q6UW10 78 aa13.77□□□□□ -0.21
ECHDC1-203ENST00000368291 MAP1LC3CQ9BXW4 147 aa13.77□□□□□ -0.21
ECHDC1-203ENST00000368291 PLA2G2DQ9UNK4 145 aa13.77□□□□□ -0.21
ECHDC1-203ENST00000368291 HERC1Q15751 4861 aa13.76□□□□□ -0.21
ECHDC1-203ENST00000368291 PLNP26678 52 aa13.76□□□□□ -0.21
ECHDC1-203ENST00000368291 COX17Q14061 63 aa13.76□□□□□ -0.21
ECHDC1-203ENST00000368291 SPINK6Q6UWN8 80 aa13.76□□□□□ -0.21
ECHDC1-203ENST00000368291 DPM2O94777 84 aa13.75□□□□□ -0.21
ECHDC1-203ENST00000368291 UBE2BP63146 152 aa13.74□□□□□ -0.21
ECHDC1-203ENST00000368291 TP73-AS1Q9UF72 201 aa13.74□□□□□ -0.21
ECHDC1-203ENST00000368291 IGKCP01834 107 aa13.73□□□□□ -0.21
ECHDC1-203ENST00000368291 SND1-IT1Q9HBX3 110 aa13.73□□□□□ -0.21
ECHDC1-203ENST00000368291 SYS1-DBNDD2H3BUS1 97 aa13.72□□□□□ -0.21
ECHDC1-203ENST00000368291 TSPEAR-AS2P59090 65 aa13.72□□□□□ -0.21
ECHDC1-203ENST00000368291 IGLV5-37A0A075B6J1 123 aa13.71□□□□□ -0.21
ECHDC1-203ENST00000368291 IGLV7-43P04211 117 aa13.71□□□□□ -0.21
ECHDC1-203ENST00000368291 MRPL55Q7Z7F7 128 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-203ENST00000368291 MT1HL1P0DM35 61 aa13.71□□□□□ -0.22
ECHDC1-203ENST00000368291 LEPROTO15243 131 aa13.7□□□□□ -0.22
ECHDC1-203ENST00000368291 LBHQ53QV2 105 aaPredicted RBP13.7□□□□□ -0.22
ECHDC1-203ENST00000368291 NDUFA12Q9UI09 145 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms