RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-204ENST00000368210 XAGE1AQ9HD64 81 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 C5orf42Q9H799 3197 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 LINC00846Q9NV44 126 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
PTPRK-204ENST00000368210 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
PTPRK-204ENST00000368210 HTTP42858 3142 aa9.55□□□□□ -0.88
PTPRK-204ENST00000368210 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
PTPRK-204ENST00000368210 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
PTPRK-204ENST00000368210 AGRNO00468 2067 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 IGLV2-18A0A075B6J9 118 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 NTM-AS1Q6ZSK4 140 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 FAM19A1Q7Z5A9 133 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 LELP1Q5T871 98 aa9.54□□□□□ -0.88
PTPRK-204ENST00000368210 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-204ENST00000368210 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
PTPRK-204ENST00000368210 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
PTPRK-204ENST00000368210 CD164Q04900 197 aa9.52□□□□□ -0.89
PTPRK-204ENST00000368210 Q6ZQY7 126 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 PCSK5Q92824 1860 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 SYCNQ0VAF6 134 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
PTPRK-204ENST00000368210 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
PTPRK-204ENST00000368210 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
PTPRK-204ENST00000368210 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
PTPRK-204ENST00000368210 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
PTPRK-204ENST00000368210 BEAN1Q3B7T3 259 aa9.49□□□□□ -0.89
PTPRK-204ENST00000368210 C16orf95Q9H693 158 aa9.49□□□□□ -0.89
PTPRK-204ENST00000368210 IGKV4-1P06312 121 aa9.49□□□□□ -0.89
PTPRK-204ENST00000368210 IL17DQ8TAD2 202 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 LIMD2Q9BT23 127 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 CHD9Q3L8U1 2897 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 H0Y9J4 135 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 HIGD2AQ9BW72 106 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 AMELXQ99217 191 aa9.48□□□□□ -0.89
PTPRK-204ENST00000368210 C3orf84H3BNL1 204 aa9.47□□□□□ -0.89
PTPRK-204ENST00000368210 Q8IZM0 81 aa9.47□□□□□ -0.89
PTPRK-204ENST00000368210 K7ERS5 55 aa9.47□□□□□ -0.89
PTPRK-204ENST00000368210 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
PTPRK-204ENST00000368210 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
PTPRK-204ENST00000368210 Q6ZSN1 163 aa9.46□□□□□ -0.89
PTPRK-204ENST00000368210 CELA1Q9UNI1 258 aa9.46□□□□□ -0.89
PTPRK-204ENST00000368210 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
PTPRK-204ENST00000368210 A0A087WYN8 130 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
PTPRK-204ENST00000368210 FHL2Q14192 279 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 CXCL6P80162 114 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 Q8N9L7 120 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 Q8N814 137 aa9.45□□□□□ -0.9
PTPRK-204ENST00000368210 PTPRBP23467 1997 aa9.44□□□□□ -0.9
PTPRK-204ENST00000368210 COX6A2Q02221 97 aa9.44□□□□□ -0.9
PTPRK-204ENST00000368210 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-204ENST00000368210 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
PTPRK-204ENST00000368210 FHL3Q13643 280 aa9.44□□□□□ -0.9
PTPRK-204ENST00000368210 COX17Q14061 63 aa9.43□□□□□ -0.9
PTPRK-204ENST00000368210 A0A087WZ39 114 aa9.43□□□□□ -0.9
PTPRK-204ENST00000368210 Q8N2B8 174 aa9.43□□□□□ -0.9
PTPRK-204ENST00000368210 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-204ENST00000368210 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
PTPRK-204ENST00000368210 Q6ZVQ6 151 aa9.42□□□□□ -0.9
PTPRK-204ENST00000368210 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
PTPRK-204ENST00000368210 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
PTPRK-204ENST00000368210 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-204ENST00000368210 A0A0J9YWU9 116 aa9.41□□□□□ -0.9
PTPRK-204ENST00000368210 M0R378 163 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 MUC7Q8TAX7 377 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 IGKV2D-28P01615 120 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
PTPRK-204ENST00000368210 LINC00315P59091 139 aa9.4□□□□□ -0.91
PTPRK-204ENST00000368210 FLNBO75369 2602 aaKnown RBP9.39□□□□□ -0.91
PTPRK-204ENST00000368210 C11orf72Q8NBR9 251 aa9.39□□□□□ -0.91
PTPRK-204ENST00000368210 COL27A1Q8IZC6 1860 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-204ENST00000368210 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
PTPRK-204ENST00000368210 MKI67P46013 3256 aaKnown RBP9.38□□□□□ -0.91
PTPRK-204ENST00000368210 A0A096LNI7 61 aa9.37□□□□□ -0.91
PTPRK-204ENST00000368210 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-204ENST00000368210 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-204ENST00000368210 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
PTPRK-204ENST00000368210 MUC4Q99102 2169 aa9.35□□□□□ -0.91
PTPRK-204ENST00000368210 A0A1B0GUV1 79 aa9.35□□□□□ -0.91
PTPRK-204ENST00000368210 hDV103S1A0JD37 113 aa9.35□□□□□ -0.91
PTPRK-204ENST00000368210 Q6ZTC4 211 aa9.35□□□□□ -0.91
PTPRK-204ENST00000368210 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
PTPRK-204ENST00000368210 KLK9Q2XQG4 91 aa9.33□□□□□ -0.92
PTPRK-204ENST00000368210 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
PTPRK-204ENST00000368210 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
PTPRK-204ENST00000368210 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
PTPRK-204ENST00000368210 TRANK1O15050 2925 aa9.31□□□□□ -0.92
PTPRK-204ENST00000368210 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms