RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 C9orf153Q5TBE3 101 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 TMEM244Q5VVB8 128 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 C6orf201Q7Z4U5 140 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 FAM223AQ8IWN6 122 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 DEFB106AQ8N104 65 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 CCDC115Q96NT0 180 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 SAR1AQ9NR31 198 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 ARL2-SNX15V9GYD0 113 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 MAGI2Q86UL8 1455 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 IFT140Q96RY7 1462 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 KDM5CP41229 1560 aa-1.59□□□□□ -2.66
MIR539-201ENST00000365690 XRN1Q8IZH2 1706 aaKnown RBP-1.6□□□□□ -2.67
MIR539-201ENST00000365690 QRICH2Q9H0J4 1663 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 TRBV7-7A0A0K0K1E9 115 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 DPM2O94777 84 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 TPM2P07951 284 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 ASIPP42127 132 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 POLR2HP52434 150 aaKnown RBP-1.6□□□□□ -2.67
MIR539-201ENST00000365690 COX6B2Q6YFQ2 88 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 TCTE3Q8IZS6 198 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 MNS1Q8NEH6 495 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 MYOZ3Q8TDC0 251 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 MAGOHBQ96A72 148 aaKnown RBP-1.6□□□□□ -2.67
MIR539-201ENST00000365690 DNAH17Q9UFH2 4485 aa-1.6□□□□□ -2.67
MIR539-201ENST00000365690 SPENQ96T58 3664 aaKnown RBP-1.6□□□□□ -2.67
MIR539-201ENST00000365690 ADGRG4Q8IZF6 3080 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.61□□□□□ -2.67
MIR539-201ENST00000365690 M0R129 80 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 MT1FP04733 61 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 TCTAP57738 103 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 NCS1P62166 190 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 SMIM20Q8N5G0 67 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 THEM6Q8WUY1 208 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 TSLPQ969D9 159 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 EDC4Q6P2E9 1401 aaKnown RBP-1.61□□□□□ -2.67
MIR539-201ENST00000365690 ANKRD30AQ9BXX3 1397 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 DOCK2Q92608 1830 aa-1.61□□□□□ -2.67
MIR539-201ENST00000365690 DNAH10Q8IVF4 4471 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 MYH13Q9UKX3 1938 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 FYCO1Q9BQS8 1478 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 UBE2L5PA0A1B0GUS4 154 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 CHKB-CPT1BH3BT56 60 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 ARMS2P0C7Q2 107 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 C3orf79P0CE67 100 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 SAA2P0DJI9 122 aaPredicted RBP-1.62□□□□□ -2.67
MIR539-201ENST00000365690 GNG3P63215 75 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 TPM4P67936 248 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 CCL7P80098 99 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 CEP19Q96LK0 163 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 PRAP1Q96NZ9 151 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 ATP6V1DQ9Y5K8 247 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 TMEM2Q9UHN6 1383 aa-1.62□□□□□ -2.67
MIR539-201ENST00000365690 PLB1Q6P1J6 1458 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 LRRC37AA6NMS7 1700 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 A0A0G2JND7 137 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 TPM3P06753 285 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 SCGB1A1P11684 91 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 CDKN2CP42773 168 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 LINC00158P58513 81 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 GNGT1P63211 74 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 MMGT1Q8N4V1 131 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 PRO3102Q9H379 93 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 UQCR10Q9UDW1 63 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 ARAP2Q8WZ64 1704 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 ATMQ13315 3056 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 ZNF518AQ6AHZ1 1483 aa-1.63□□□□□ -2.67
MIR539-201ENST00000365690 SPTBN5Q9NRC6 3674 aaKnown RBP-1.63□□□□□ -2.67
MIR539-201ENST00000365690 ANKRD36A6QL64 1941 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 A0A1W2PRE2 83 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 UBE2L3P68036 154 aaKnown RBP-1.64□□□□□ -2.67
MIR539-201ENST00000365690 PTRHD1Q6GMV3 140 aaKnown RBP-1.64□□□□□ -2.67
MIR539-201ENST00000365690 OR9Q1Q8NGQ5 310 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 CDC26Q8NHZ8 85 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 PPP1R14BQ96C90 147 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 ATP6V1G3Q96LB4 118 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 LINC00846Q9NV44 126 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 TIAM2Q8IVF5 1701 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 PSME4Q14997 1843 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 TET3O43151 1660 aa-1.64□□□□□ -2.67
MIR539-201ENST00000365690 PDCD11Q14690 1871 aaKnown RBP-1.65□□□□□ -2.67
MIR539-201ENST00000365690 OVOS2A0A0G2JMS6 1433 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 ABCC5O15440 1437 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 MAPKBP1O60336 1514 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 C4AP0C0L4 1744 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 C4BP0C0L5 1744 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 RPS29P62273 56 aaKnown RBP-1.65□□□□□ -2.67
MIR539-201ENST00000365690 HIST1H1AQ02539 215 aaPredicted RBP-1.65□□□□□ -2.67
MIR539-201ENST00000365690 TMEM128Q5BJH2 165 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 SERP2Q8N6R1 65 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 TMEM35BQ8NCS4 154 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 SNRNP25Q9BV90 132 aaKnown RBP-1.65□□□□□ -2.67
MIR539-201ENST00000365690 SMPXQ9UHP9 88 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.65□□□□□ -2.67
MIR539-201ENST00000365690 RGPD2P0DJD1 1756 aa-1.65□□□□□ -2.67
MIR539-201ENST00000365690 KIAA1551Q9HCM1 1747 aa-1.66□□□□□ -2.67
MIR539-201ENST00000365690 LINC01546A6NGU7 62 aa-1.66□□□□□ -2.68
MIR539-201ENST00000365690 H3BQF6 201 aa-1.66□□□□□ -2.68
MIR539-201ENST00000365690 K7EP13 123 aa-1.66□□□□□ -2.68
MIR539-201ENST00000365690 SERPINB1P30740 379 aa-1.66□□□□□ -2.68
MIR539-201ENST00000365690 REEP5Q00765 189 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms