RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HIVEP2P31629 2446 aa13.08□□□□□ -0.31
SHANK1-202ENST00000359082 A8MTW9 85 aa13.08□□□□□ -0.32
SHANK1-202ENST00000359082 PLXNB1O43157 2135 aa13.07□□□□□ -0.32
SHANK1-202ENST00000359082 CRYGAP11844 174 aa13.06□□□□□ -0.32
SHANK1-202ENST00000359082 C1orf134Q5TEV5 83 aa13.06□□□□□ -0.32
SHANK1-202ENST00000359082 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
SHANK1-202ENST00000359082 AMELXQ99217 191 aa13.06□□□□□ -0.32
SHANK1-202ENST00000359082 BDP1A6H8Y1 2624 aa13.06□□□□□ -0.32
SHANK1-202ENST00000359082 LYPD5Q6UWN5 251 aa13.05□□□□□ -0.32
SHANK1-202ENST00000359082 HCG22E2RYF7 251 aa13.05□□□□□ -0.32
SHANK1-202ENST00000359082 RAI1Q7Z5J4 1906 aaPredicted RBP13.05□□□□□ -0.32
SHANK1-202ENST00000359082 PRLHP81277 87 aa13.04□□□□□ -0.32
SHANK1-202ENST00000359082 C10orf142B7Z368 130 aa13.03□□□□□ -0.32
SHANK1-202ENST00000359082 C16orf95Q9H693 158 aa13.03□□□□□ -0.32
SHANK1-202ENST00000359082 HCFC1P51610 2035 aa13.02□□□□□ -0.32
SHANK1-202ENST00000359082 C2orf48Q96LS8 159 aa13.02□□□□□ -0.33
SHANK1-202ENST00000359082 Q6ZRU5 148 aa13.01□□□□□ -0.33
SHANK1-202ENST00000359082 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
SHANK1-202ENST00000359082 LRP4O75096 1905 aa13.01□□□□□ -0.33
SHANK1-202ENST00000359082 CSDC2Q9Y534 153 aaKnown RBP13□□□□□ -0.33
SHANK1-202ENST00000359082 FSHBP01225 129 aa13□□□□□ -0.33
SHANK1-202ENST00000359082 ATRXP46100 2492 aa12.99□□□□□ -0.33
SHANK1-202ENST00000359082 F8WDY8 70 aa12.98□□□□□ -0.33
SHANK1-202ENST00000359082 Q9UF83 564 aa12.98□□□□□ -0.33
SHANK1-202ENST00000359082 OTOGLQ3ZCN5 2332 aa12.97□□□□□ -0.33
SHANK1-202ENST00000359082 SORL1Q92673 2214 aa12.96□□□□□ -0.33
SHANK1-202ENST00000359082 C7orf65Q6ZTY9 151 aa12.95□□□□□ -0.34
SHANK1-202ENST00000359082 LIMD2Q9BT23 127 aa12.95□□□□□ -0.34
SHANK1-202ENST00000359082 A0A1B0GUV1 79 aa12.95□□□□□ -0.34
SHANK1-202ENST00000359082 SMCR5Q8TEV8 140 aa12.95□□□□□ -0.34
SHANK1-202ENST00000359082 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
SHANK1-202ENST00000359082 EML5Q05BV3 1969 aa12.94□□□□□ -0.34
SHANK1-202ENST00000359082 IGKV2D-30A0A075B6S6 120 aa12.94□□□□□ -0.34
SHANK1-202ENST00000359082 IGKV2-30P06310 120 aa12.94□□□□□ -0.34
SHANK1-202ENST00000359082 LINC00846Q9NV44 126 aa12.94□□□□□ -0.34
SHANK1-202ENST00000359082 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
SHANK1-202ENST00000359082 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
SHANK1-202ENST00000359082 A0A096LNJ9 63 aa12.93□□□□□ -0.34
SHANK1-202ENST00000359082 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
SHANK1-202ENST00000359082 C1orf64Q8NEQ6 169 aa12.92□□□□□ -0.34
SHANK1-202ENST00000359082 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
SHANK1-202ENST00000359082 ARHGAP32A7KAX9 2087 aa12.91□□□□□ -0.34
SHANK1-202ENST00000359082 SMIM29Q86T20 159 aa12.91□□□□□ -0.34
SHANK1-202ENST00000359082 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
SHANK1-202ENST00000359082 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
SHANK1-202ENST00000359082 KIAA0087Q14695 138 aa12.89□□□□□ -0.35
SHANK1-202ENST00000359082 LINC00337Q8N6G1 96 aa12.89□□□□□ -0.35
SHANK1-202ENST00000359082 LINC01561Q8N1V8 128 aa12.88□□□□□ -0.35
SHANK1-202ENST00000359082 CPAMD8Q8IZJ3 1885 aa12.88□□□□□ -0.35
SHANK1-202ENST00000359082 hDV103S1A0JD37 113 aa12.87□□□□□ -0.35
SHANK1-202ENST00000359082 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
SHANK1-202ENST00000359082 CDIP1Q9H305 208 aa12.87□□□□□ -0.35
SHANK1-202ENST00000359082 FHL3Q13643 280 aa12.85□□□□□ -0.35
SHANK1-202ENST00000359082 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
SHANK1-202ENST00000359082 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
SHANK1-202ENST00000359082 CXCL6P80162 114 aa12.84□□□□□ -0.35
SHANK1-202ENST00000359082 NOTCH2Q04721 2471 aa12.84□□□□□ -0.35
SHANK1-202ENST00000359082 ACACBO00763 2458 aa12.83□□□□□ -0.35
SHANK1-202ENST00000359082 Q8N2B8 174 aa12.83□□□□□ -0.36
SHANK1-202ENST00000359082 PRO0628Q9UI54 55 aa12.82□□□□□ -0.36
SHANK1-202ENST00000359082 MOBPQ13875 183 aa12.82□□□□□ -0.36
SHANK1-202ENST00000359082 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
SHANK1-202ENST00000359082 MDFIQ99750 246 aa12.82□□□□□ -0.36
SHANK1-202ENST00000359082 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
SHANK1-202ENST00000359082 ADAMTS20P59510 1910 aa12.8□□□□□ -0.36
SHANK1-202ENST00000359082 A0A1B0GU69 56 aa12.8□□□□□ -0.36
SHANK1-202ENST00000359082 EP400Q96L91 3159 aa12.79□□□□□ -0.36
SHANK1-202ENST00000359082 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.36
SHANK1-202ENST00000359082 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
SHANK1-202ENST00000359082 LINC00167Q96N53 147 aa12.77□□□□□ -0.37
SHANK1-202ENST00000359082 NHLRC4P0CG21 123 aaPredicted RBP12.76□□□□□ -0.37
SHANK1-202ENST00000359082 C6orf48Q9UBA6 75 aa12.74□□□□□ -0.37
SHANK1-202ENST00000359082 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
SHANK1-202ENST00000359082 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
SHANK1-202ENST00000359082 ACYP2P14621 99 aa12.72□□□□□ -0.37
SHANK1-202ENST00000359082 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
SHANK1-202ENST00000359082 CHTF8P0CG12 524 aa12.72□□□□□ -0.37
SHANK1-202ENST00000359082 PHF5AQ7RTV0 110 aaKnown RBP12.71□□□□□ -0.37
SHANK1-202ENST00000359082 PLA2G1BP04054 148 aaKnown RBP12.71□□□□□ -0.37
SHANK1-202ENST00000359082 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.38
SHANK1-202ENST00000359082 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
SHANK1-202ENST00000359082 SPAG11AQ6PDA7 123 aa12.7□□□□□ -0.38
SHANK1-202ENST00000359082 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
SHANK1-202ENST00000359082 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
SHANK1-202ENST00000359082 TP53AIP1Q9HCN2 124 aa12.68□□□□□ -0.38
SHANK1-202ENST00000359082 FAM218AQ96MZ4 157 aa12.67□□□□□ -0.38
SHANK1-202ENST00000359082 SONP18583 2426 aaKnown RBP12.67□□□□□ -0.38
SHANK1-202ENST00000359082 AGRNO00468 2067 aa12.67□□□□□ -0.38
SHANK1-202ENST00000359082 IGHV3OR16-9A0A0B4J2B5 98 aa12.66□□□□□ -0.38
SHANK1-202ENST00000359082 SMCPP49901 116 aaPredicted RBP12.65□□□□□ -0.38
SHANK1-202ENST00000359082 ELOF1P60002 83 aaKnown RBP12.65□□□□□ -0.38
SHANK1-202ENST00000359082 GOLGB1Q14789 3259 aaKnown RBP12.65□□□□□ -0.38
SHANK1-202ENST00000359082 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
SHANK1-202ENST00000359082 IGLV8-61A0A075B6I0 122 aa12.64□□□□□ -0.39
SHANK1-202ENST00000359082 RPS28P62857 69 aaKnown RBP12.64□□□□□ -0.39
SHANK1-202ENST00000359082 LINC00313P59037 77 aa12.63□□□□□ -0.39
SHANK1-202ENST00000359082 RTL8CO15255 209 aa12.63□□□□□ -0.39
SHANK1-202ENST00000359082 LINC00476Q8WZB0 136 aa12.63□□□□□ -0.39
SHANK1-202ENST00000359082 SERTAD4-AS1Q5TG53 156 aa12.62□□□□□ -0.39
SHANK1-202ENST00000359082 FAM19A4Q96LR4 140 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms