RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
PDLIM7-202ENST00000355841 APOMO95445 188 aa11.59□□□□□ -0.55
PDLIM7-202ENST00000355841 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
PDLIM7-202ENST00000355841 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
PDLIM7-202ENST00000355841 HINT1P49773 126 aaPredicted RBP11.58□□□□□ -0.56
PDLIM7-202ENST00000355841 CNBPP62633 177 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-202ENST00000355841 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-202ENST00000355841 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
PDLIM7-202ENST00000355841 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
PDLIM7-202ENST00000355841 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
PDLIM7-202ENST00000355841 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-202ENST00000355841 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-202ENST00000355841 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
PDLIM7-202ENST00000355841 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
PDLIM7-202ENST00000355841 TOMM7Q9P0U1 55 aa11.55□□□□□ -0.56
PDLIM7-202ENST00000355841 SMIM1B2RUZ4 78 aa11.54□□□□□ -0.56
PDLIM7-202ENST00000355841 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-202ENST00000355841 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
PDLIM7-202ENST00000355841 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
PDLIM7-202ENST00000355841 COX8AP10176 69 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 ODF1Q14990 250 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 Q6ZRU5 148 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
PDLIM7-202ENST00000355841 F8VRH5 84 aa11.52□□□□□ -0.56
PDLIM7-202ENST00000355841 HAMPP81172 84 aa11.52□□□□□ -0.56
PDLIM7-202ENST00000355841 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.56
PDLIM7-202ENST00000355841 CARD19Q96LW7 228 aa11.52□□□□□ -0.56
PDLIM7-202ENST00000355841 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
PDLIM7-202ENST00000355841 C2orf82Q6UX34 121 aa11.52□□□□□ -0.57
PDLIM7-202ENST00000355841 KIAA1109Q2LD37 5005 aa11.51□□□□□ -0.57
PDLIM7-202ENST00000355841 H3BRM9 83 aa11.51□□□□□ -0.57
PDLIM7-202ENST00000355841 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
PDLIM7-202ENST00000355841 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
PDLIM7-202ENST00000355841 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
PDLIM7-202ENST00000355841 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
PDLIM7-202ENST00000355841 PRSS2P07478 247 aa11.49□□□□□ -0.57
PDLIM7-202ENST00000355841 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
PDLIM7-202ENST00000355841 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-202ENST00000355841 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
PDLIM7-202ENST00000355841 NDUFA1O15239 70 aa11.48□□□□□ -0.57
PDLIM7-202ENST00000355841 Q8IZM0 81 aa11.48□□□□□ -0.57
PDLIM7-202ENST00000355841 PANO1I0J062 215 aa11.47□□□□□ -0.57
PDLIM7-202ENST00000355841 PTTG1IPP53801 180 aa11.47□□□□□ -0.57
PDLIM7-202ENST00000355841 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
PDLIM7-202ENST00000355841 CHTF8P0CG12 524 aa11.46□□□□□ -0.57
PDLIM7-202ENST00000355841 CKS1BP61024 79 aa11.46□□□□□ -0.57
PDLIM7-202ENST00000355841 C2orf91Q6ZV80 131 aa11.46□□□□□ -0.57
PDLIM7-202ENST00000355841 C6orf48Q9UBA6 75 aa11.46□□□□□ -0.57
PDLIM7-202ENST00000355841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.46□□□□□ -0.57
PDLIM7-202ENST00000355841 DNAH8Q96JB1 4490 aa11.46□□□□□ -0.58
PDLIM7-202ENST00000355841 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 TAX1BP3O14907 124 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 XGP55808 180 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 Q6ZSA8 131 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
PDLIM7-202ENST00000355841 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 DPM2O94777 84 aa11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 PLNP26678 52 aa11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 ANKRD39Q53RE8 183 aa11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 RYR1P21817 5038 aa11.44□□□□□ -0.58
PDLIM7-202ENST00000355841 F8WDY8 70 aa11.43□□□□□ -0.58
PDLIM7-202ENST00000355841 IGKCP01834 107 aa11.43□□□□□ -0.58
PDLIM7-202ENST00000355841 TP73-AS1Q9UF72 201 aa11.43□□□□□ -0.58
PDLIM7-202ENST00000355841 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
PDLIM7-202ENST00000355841 A0A096LNI7 61 aa11.42□□□□□ -0.58
PDLIM7-202ENST00000355841 HSPG2P98160 4391 aa11.41□□□□□ -0.58
PDLIM7-202ENST00000355841 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-202ENST00000355841 HSD52Q0P140 79 aa11.41□□□□□ -0.58
PDLIM7-202ENST00000355841 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 VAMP3Q15836 100 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 DPH3Q96FX2 82 aa11.4□□□□□ -0.58
PDLIM7-202ENST00000355841 A6NDN8 102 aa11.4□□□□□ -0.59
PDLIM7-202ENST00000355841 Q6ZVH6 145 aa11.4□□□□□ -0.59
PDLIM7-202ENST00000355841 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
PDLIM7-202ENST00000355841 CXCL5P42830 114 aa11.39□□□□□ -0.59
PDLIM7-202ENST00000355841 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
PDLIM7-202ENST00000355841 CBY1Q9Y3M2 126 aa11.39□□□□□ -0.59
PDLIM7-202ENST00000355841 Q6ZRP5 223 aa11.38□□□□□ -0.59
PDLIM7-202ENST00000355841 SPACA4Q8TDM5 124 aa11.38□□□□□ -0.59
PDLIM7-202ENST00000355841 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 ZNF625Q96I27 306 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 HIGD1BQ9P298 99 aa11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-202ENST00000355841 TSPEAR-AS2P59090 65 aa11.35□□□□□ -0.59
PDLIM7-202ENST00000355841 A0A087WYN8 130 aa11.34□□□□□ -0.59
PDLIM7-202ENST00000355841 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
PDLIM7-202ENST00000355841 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
PDLIM7-202ENST00000355841 NMUP48645 174 aa11.33□□□□□ -0.6
PDLIM7-202ENST00000355841 HERVK_113P61574 105 aa11.33□□□□□ -0.6
PDLIM7-202ENST00000355841 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms