RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 DEFB4AO15263 64 aa15.38■□□□□ 0.05
NKX2-1-201ENST00000354822 CCL18P55774 89 aa15.38■□□□□ 0.05
NKX2-1-201ENST00000354822 WIPF1O43516 503 aa15.37■□□□□ 0.05
NKX2-1-201ENST00000354822 Q8NAQ8 132 aa15.37■□□□□ 0.05
NKX2-1-201ENST00000354822 IGKV2-28A0A075B6P5 120 aa15.36■□□□□ 0.05
NKX2-1-201ENST00000354822 IGKV2D-28P01615 120 aa15.36■□□□□ 0.05
NKX2-1-201ENST00000354822 SPART-AS1P0CW21 52 aa15.36■□□□□ 0.05
NKX2-1-201ENST00000354822 LINC00337Q8N6G1 96 aa15.36■□□□□ 0.05
NKX2-1-201ENST00000354822 PFN2P35080 140 aa15.35■□□□□ 0.05
NKX2-1-201ENST00000354822 CD164L2Q6UWJ8 174 aa15.35■□□□□ 0.05
NKX2-1-201ENST00000354822 LINC00269Q8N2A0 174 aa15.34■□□□□ 0.05
NKX2-1-201ENST00000354822 MRPL23Q16540 153 aaKnown RBP15.33■□□□□ 0.04
NKX2-1-201ENST00000354822 CLPSL2Q6UWE3 100 aa15.32■□□□□ 0.04
NKX2-1-201ENST00000354822 FAM240AA0A1B0GVK7 77 aa15.32■□□□□ 0.04
NKX2-1-201ENST00000354822 CXCL5P42830 114 aa15.31■□□□□ 0.04
NKX2-1-201ENST00000354822 CKS1BP61024 79 aa15.31■□□□□ 0.04
NKX2-1-201ENST00000354822 CELA1Q9UNI1 258 aa15.31■□□□□ 0.04
NKX2-1-201ENST00000354822 ANGP03950 147 aaKnown RBP15.3■□□□□ 0.04
NKX2-1-201ENST00000354822 IGHV4-30-4P0DP06 118 aa15.3■□□□□ 0.04
NKX2-1-201ENST00000354822 REG3AQ06141 175 aa15.3■□□□□ 0.04
NKX2-1-201ENST00000354822 A0A1B0GV72 72 aa15.29■□□□□ 0.04
NKX2-1-201ENST00000354822 H0YGX0 51 aa15.29■□□□□ 0.04
NKX2-1-201ENST00000354822 CHCHD10Q8WYQ3 142 aaPredicted RBP15.29■□□□□ 0.04
NKX2-1-201ENST00000354822 C11orf68Q9H3H3 251 aaKnown RBP15.29■□□□□ 0.04
NKX2-1-201ENST00000354822 VWFP04275 2813 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 BAALC-AS2P0C853 105 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 SMIM11BQ8TCY0 68 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 SNCGO76070 127 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 COX17Q14061 63 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 FAM218AQ96MZ4 157 aa15.28■□□□□ 0.04
NKX2-1-201ENST00000354822 LELP1Q5T871 98 aa15.27■□□□□ 0.04
NKX2-1-201ENST00000354822 CFAP161Q6P656 301 aa15.27■□□□□ 0.04
NKX2-1-201ENST00000354822 MALP21145 153 aa15.26■□□□□ 0.03
NKX2-1-201ENST00000354822 NBEAL2Q6ZNJ1 2754 aa15.26■□□□□ 0.03
NKX2-1-201ENST00000354822 KIAA0087Q14695 138 aa15.26■□□□□ 0.03
NKX2-1-201ENST00000354822 ACYP1P07311 99 aa15.24■□□□□ 0.03
NKX2-1-201ENST00000354822 HTN3P15516 51 aa15.22■□□□□ 0.03
NKX2-1-201ENST00000354822 OR13C6PQ8NH95 151 aa15.22■□□□□ 0.03
NKX2-1-201ENST00000354822 TENM1Q9UKZ4 2725 aa15.22■□□□□ 0.03
NKX2-1-201ENST00000354822 IGLV10-54A0A075B6I4 117 aa15.21■□□□□ 0.03
NKX2-1-201ENST00000354822 DNAL4O96015 105 aa15.21■□□□□ 0.03
NKX2-1-201ENST00000354822 TEP1Q99973 2627 aaKnown RBP15.21■□□□□ 0.03
NKX2-1-201ENST00000354822 GAGE2BQ13066 116 aa15.21■□□□□ 0.02
NKX2-1-201ENST00000354822 GAGE2EQ4V326 116 aa15.21■□□□□ 0.02
NKX2-1-201ENST00000354822 C15orf53Q8NAA6 179 aa15.21■□□□□ 0.02
NKX2-1-201ENST00000354822 GAGE2DQ9UEU5 116 aa15.21■□□□□ 0.02
NKX2-1-201ENST00000354822 NDUFC2O95298 119 aa15.2■□□□□ 0.02
NKX2-1-201ENST00000354822 KRTAP24-1Q3LI83 254 aa15.2■□□□□ 0.02
NKX2-1-201ENST00000354822 Q6Q795 121 aa15.2■□□□□ 0.02
NKX2-1-201ENST00000354822 Q8N3U1 123 aa15.2■□□□□ 0.02
NKX2-1-201ENST00000354822 KLK5Q9Y337 293 aaPredicted RBP15.19■□□□□ 0.02
NKX2-1-201ENST00000354822 F8P00451 2351 aa15.19■□□□□ 0.02
NKX2-1-201ENST00000354822 INAFM2P0DMQ5 153 aa15.18■□□□□ 0.02
NKX2-1-201ENST00000354822 Q9HAA7 133 aa15.18■□□□□ 0.02
NKX2-1-201ENST00000354822 ATRQ13535 2644 aa15.18■□□□□ 0.02
NKX2-1-201ENST00000354822 MUC7Q8TAX7 377 aa15.17■□□□□ 0.02
NKX2-1-201ENST00000354822 PRR34Q9NV39 138 aa15.17■□□□□ 0.02
NKX2-1-201ENST00000354822 C22orf24Q9Y442 160 aa15.17■□□□□ 0.02
NKX2-1-201ENST00000354822 A0A087WYN8 130 aa15.16■□□□□ 0.02
NKX2-1-201ENST00000354822 H3BNG1 76 aa15.14■□□□□ 0.01
NKX2-1-201ENST00000354822 LYPD5Q6UWN5 251 aa15.14■□□□□ 0.01
NKX2-1-201ENST00000354822 OXLD1Q5BKU9 147 aa15.12■□□□□ 0.01
NKX2-1-201ENST00000354822 TMEM126AQ9H061 195 aa15.12■□□□□ 0.01
NKX2-1-201ENST00000354822 KLK12Q9UKR0 248 aa15.12■□□□□ 0.01
NKX2-1-201ENST00000354822 SPAG11BQ08648 103 aa15.11■□□□□ 0.01
NKX2-1-201ENST00000354822 C3orf56Q8N813 242 aa15.11■□□□□ 0.01
NKX2-1-201ENST00000354822 A0A1B0GX51 115 aa15.1■□□□□ 0.01
NKX2-1-201ENST00000354822 LECT2O14960 151 aa15.1■□□□□ 0.01
NKX2-1-201ENST00000354822 TTC32Q5I0X7 151 aa15.09■□□□□ 0.01
NKX2-1-201ENST00000354822 A0A0J9YWU9 116 aa15.09■□□□□ 0.01
NKX2-1-201ENST00000354822 KRTAP10-11P60412 298 aa15.09■□□□□ 0.01
NKX2-1-201ENST00000354822 ENHOQ6UWT2 76 aa15.09■□□□□ 0.01
NKX2-1-201ENST00000354822 TRRAPQ9Y4A5 3859 aa15.08■□□□□ 0
NKX2-1-201ENST00000354822 C9orf116Q5BN46 136 aaPredicted RBP15.08■□□□□ 0
NKX2-1-201ENST00000354822 ANAPC13Q9BS18 74 aa15.07■□□□□ 0
NKX2-1-201ENST00000354822 NANOS2P60321 138 aaKnown RBP15.07■□□□□ 0
NKX2-1-201ENST00000354822 PRR3P79522 188 aaKnown RBP15.06■□□□□ 0
NKX2-1-201ENST00000354822 EGFEM1PQ0D2K5 195 aa15.06■□□□□ 0
NKX2-1-201ENST00000354822 UNQ6190/PRO20217Q6UXQ8 127 aa15.05■□□□□ 0
NKX2-1-201ENST00000354822 CYSRT1A8MQ03 144 aa15.05■□□□□ -0
NKX2-1-201ENST00000354822 ORMDL1Q9P0S3 153 aa15.05■□□□□ -0
NKX2-1-201ENST00000354822 OBSCN-AS1Q96MR7 158 aa15.04■□□□□ -0
NKX2-1-201ENST00000354822 GVQW2A0A096LPI5 108 aaPredicted RBP15.04■□□□□ -0
NKX2-1-201ENST00000354822 TRBV7-7A0A0K0K1E9 115 aa15.04■□□□□ -0
NKX2-1-201ENST00000354822 NDUFV3P56181 108 aaKnown RBP15.04■□□□□ -0
NKX2-1-201ENST00000354822 KPRPQ5T749 579 aaPredicted RBP15.04■□□□□ -0
NKX2-1-201ENST00000354822 SDIM1Q6ZPB5 146 aa15.04■□□□□ -0
NKX2-1-201ENST00000354822 C6orf223Q8N319 242 aa15.04■□□□□ -0
NKX2-1-201ENST00000354822 C10orf25Q5T742 122 aa15.03■□□□□ -0
NKX2-1-201ENST00000354822 LINC00643Q86TS7 51 aa15.03■□□□□ -0
NKX2-1-201ENST00000354822 LINC00167Q96N53 147 aa15.03■□□□□ -0
NKX2-1-201ENST00000354822 IMUPQ9GZP8 106 aa15.02■□□□□ -0
NKX2-1-201ENST00000354822 GAGE2AQ6NT46 116 aa15.01□□□□□ -0.01
NKX2-1-201ENST00000354822 RETNQ9HD89 108 aa15.01□□□□□ -0.01
NKX2-1-201ENST00000354822 S100A7L2Q5SY68 101 aa15□□□□□ -0.01
NKX2-1-201ENST00000354822 Q8N814 137 aa15□□□□□ -0.01
NKX2-1-201ENST00000354822 FLNBO75369 2602 aaKnown RBP14.99□□□□□ -0.01
NKX2-1-201ENST00000354822 Q6ZTC4 211 aa14.98□□□□□ -0.01
NKX2-1-201ENST00000354822 NCR3O14931 201 aa14.97□□□□□ -0.01
NKX2-1-201ENST00000354822 SLPIP03973 132 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms