RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FAM236BA0A1B0GV22 79 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1B0GW64 132 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 FABP5P3A8MUU1 101 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV2D-28P01615 120 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 Q0VG73 95 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 HCP5Q6MZN7 132 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MORN4Q8NDC4 146 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PRO1854Q9UHT4 67 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 KLK5Q9Y337 293 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MYH4Q9Y623 1939 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MED12Q93074 2177 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 GREB1Q4ZG55 1949 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MYH2Q9UKX2 1941 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 DNAH8Q96JB1 4490 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV40A0A0B4J280 105 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV1-24A0A0C4DH33 117 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV1-9A0A0C4DH69 117 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MYMXA0A1B0GTQ4 84 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 F2Z2F3 143 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 F8WEM9 126 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 NPYP01303 97 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 SCTP09683 121 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 COX8AP10176 69 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 CRYGAP11844 174 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 XCL1P47992 114 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 KLRD1Q13241 179 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 HRCT1Q6UXD1 115 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF818PQ6ZRF7 136 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 NUP35Q8NFH5 326 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 OTORQ9NRC9 128 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 AKAP6Q13023 2319 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 USH2AO75445 5202 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MYH1P12882 1939 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV1D-42A0A075B6H8 117 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGLV2-18A0A075B6J9 118 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV12-2A0A075B6T6 113 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV1-1A0A0B4J248 108 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV4A0A0B4J268 109 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGLC7A0M8Q6 106 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 CHKB-CPT1BH3BT56 60 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 UQCRQO14949 82 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PRB2P02812 416 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 HLA-DRB4P13762 266 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PSMB8P28062 276 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 DSCR4P56555 118 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 FXYD7P58549 80 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PRB3Q04118 309 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 FOXI2Q6ZQN5 318 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MIR17HGQ75NE6 70 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 WFDC11Q8NEX6 87 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 DSCR8Q96T75 97 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 Q9Y3F1 56 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 HLA-DRB4X5D2U9 266 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MDN1Q9NU22 5596 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 ESPL1Q14674 2120 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MDC1Q14676 2089 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 hADV29S1A0JD25 119 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TCRAP04437 139 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 BAALC-AS2P0C853 105 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 COX6A1P12074 109 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 SNRPD3P62318 126 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TFF3Q07654 80 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 WFDC2Q14508 124 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 Q6Q795 121 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 Q6ZUT4 128 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TEN1Q86WV5 123 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 C18orf32Q8TCD1 76 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TM2D3Q9BRN9 247 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TIMM21Q9BVV7 248 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 LY96Q9Y6Y9 160 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 HEATR5BQ9P2D3 2071 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 CD163L1Q9NR16 1453 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TACC2O95359 2948 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 PLXNB2O15031 1838 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV3D-7A0A0C4DH55 119 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 K7ERJ3 54 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 IGLC1P0CG04 106 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 PEBP1P30086 187 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 RNASE4P34096 147 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 LINC01554Q52M75 96 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 NMSQ5H8A3 153 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 DPH3P1Q9H4G8 78 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 JPT1Q9UK76 154 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 PI4KAP42356 2102 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 CHD3Q12873 2000 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 DOCK4Q8N1I0 1966 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 INTS1Q8N201 2190 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 IGLV4-60A0A075B6I1 120 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TRBV19A0A075B6N1 114 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM14DPA8MWL7 114 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 ODF3BA8MYP8 253 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 ADCYAP1P18509 176 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 C3orf22Q8N5N4 141 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TOMM6Q96B49 74 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 CXCL16Q9H2A7 254 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 CYTL1Q9NRR1 136 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 ZFC3H1O60293 1989 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms