RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 Q9H8V8 135 aa13.13□□□□□ -0.31
SPNS1-204ENST00000352260 TRGV2A0A075B6R0 118 aa13.12□□□□□ -0.31
SPNS1-204ENST00000352260 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
SPNS1-204ENST00000352260 C22orf24Q9Y442 160 aa13.12□□□□□ -0.31
SPNS1-204ENST00000352260 VWFP04275 2813 aa13.12□□□□□ -0.31
SPNS1-204ENST00000352260 ANK2Q01484 3957 aa13.12□□□□□ -0.31
SPNS1-204ENST00000352260 TRBV10-1A0A0K0K1A3 114 aa13.11□□□□□ -0.31
SPNS1-204ENST00000352260 SMIM9A6NGZ8 99 aa13.11□□□□□ -0.31
SPNS1-204ENST00000352260 WIPF1O43516 503 aa13.11□□□□□ -0.31
SPNS1-204ENST00000352260 TRAV13-2A0A0B4J235 113 aa13.11□□□□□ -0.31
SPNS1-204ENST00000352260 RPL28P46779 137 aaKnown RBP13.11□□□□□ -0.31
SPNS1-204ENST00000352260 TMEM258P61165 79 aa13.11□□□□□ -0.31
SPNS1-204ENST00000352260 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
SPNS1-204ENST00000352260 MALP21145 153 aa13.1□□□□□ -0.31
SPNS1-204ENST00000352260 RPL18AQ02543 176 aaKnown RBP13.1□□□□□ -0.31
SPNS1-204ENST00000352260 X6R8D5 127 aa13.1□□□□□ -0.31
SPNS1-204ENST00000352260 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
SPNS1-204ENST00000352260 Q6JHZ5 121 aa13.09□□□□□ -0.31
SPNS1-204ENST00000352260 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
SPNS1-204ENST00000352260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
SPNS1-204ENST00000352260 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
SPNS1-204ENST00000352260 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
SPNS1-204ENST00000352260 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
SPNS1-204ENST00000352260 FAM19A5Q7Z5A7 132 aaPredicted RBP13.08□□□□□ -0.32
SPNS1-204ENST00000352260 KIR2DL5BQ8NHK3 375 aa13.08□□□□□ -0.32
SPNS1-204ENST00000352260 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
SPNS1-204ENST00000352260 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
SPNS1-204ENST00000352260 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
SPNS1-204ENST00000352260 APOC4P55056 127 aa13.06□□□□□ -0.32
SPNS1-204ENST00000352260 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
SPNS1-204ENST00000352260 DNAL4O96015 105 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 SERP2Q8N6R1 65 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 OBSCN-AS1Q96MR7 158 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 TRBV6-4A0A1B0GX49 114 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 FHL2Q14192 279 aa13.05□□□□□ -0.32
SPNS1-204ENST00000352260 DEFB135Q30KP9 77 aa13.04□□□□□ -0.32
SPNS1-204ENST00000352260 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
SPNS1-204ENST00000352260 LOC100131303A0A0U1RQF7 123 aa13.03□□□□□ -0.32
SPNS1-204ENST00000352260 H0YGX0 51 aa13.03□□□□□ -0.32
SPNS1-204ENST00000352260 COX6A2Q02221 97 aa13.03□□□□□ -0.32
SPNS1-204ENST00000352260 DEFB130BP0DP73 79 aa13.03□□□□□ -0.32
SPNS1-204ENST00000352260 DEFB130AP0DP74 79 aa13.03□□□□□ -0.32
SPNS1-204ENST00000352260 CRPP02741 224 aa13.02□□□□□ -0.32
SPNS1-204ENST00000352260 NTM-AS1Q6ZSK4 140 aa13.02□□□□□ -0.32
SPNS1-204ENST00000352260 KLK5Q9Y337 293 aaPredicted RBP13.01□□□□□ -0.33
SPNS1-204ENST00000352260 hADV29S1A0JD25 119 aa13□□□□□ -0.33
SPNS1-204ENST00000352260 IGHV4-30-4P0DP06 118 aa13□□□□□ -0.33
SPNS1-204ENST00000352260 OXLD1Q5BKU9 147 aa13□□□□□ -0.33
SPNS1-204ENST00000352260 UPK3BQ9BT76 320 aa13□□□□□ -0.33
SPNS1-204ENST00000352260 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
SPNS1-204ENST00000352260 F5H768 121 aa12.99□□□□□ -0.33
SPNS1-204ENST00000352260 PKD1L1Q8TDX9 2849 aa12.99□□□□□ -0.33
SPNS1-204ENST00000352260 DPH3Q96FX2 82 aa12.98□□□□□ -0.33
SPNS1-204ENST00000352260 IGHV4-28A0A0C4DH34 117 aa12.98□□□□□ -0.33
SPNS1-204ENST00000352260 LYRM9A8MSI8 78 aa12.98□□□□□ -0.33
SPNS1-204ENST00000352260 KRTAP10-11P60412 298 aa12.97□□□□□ -0.33
SPNS1-204ENST00000352260 NDUFC2-KCTD14E9PQ53 114 aa12.96□□□□□ -0.33
SPNS1-204ENST00000352260 S100A7L2Q5SY68 101 aa12.96□□□□□ -0.33
SPNS1-204ENST00000352260 DEFB4AO15263 64 aa12.96□□□□□ -0.34
SPNS1-204ENST00000352260 ATP5EP2Q5VTU8 51 aa12.96□□□□□ -0.34
SPNS1-204ENST00000352260 Q8NAQ8 132 aa12.95□□□□□ -0.34
SPNS1-204ENST00000352260 TMEM243Q9BU79 118 aa12.95□□□□□ -0.34
SPNS1-204ENST00000352260 Q9HAA7 133 aa12.95□□□□□ -0.34
SPNS1-204ENST00000352260 A0A0U1RRA0 63 aa12.94□□□□□ -0.34
SPNS1-204ENST00000352260 MIFP14174 115 aa12.94□□□□□ -0.34
SPNS1-204ENST00000352260 NBEAL1Q6ZS30 2694 aa12.93□□□□□ -0.34
SPNS1-204ENST00000352260 TRAV13-1A0A0B4J241 112 aa12.93□□□□□ -0.34
SPNS1-204ENST00000352260 USP17L23D6RBM5 183 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 EGFEM1PQ0D2K5 195 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 SND1-IT1Q9HBX3 110 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 LINC00846Q9NV44 126 aa12.92□□□□□ -0.34
SPNS1-204ENST00000352260 UBE2L6O14933 153 aa12.91□□□□□ -0.34
SPNS1-204ENST00000352260 GYPEP15421 78 aa12.91□□□□□ -0.34
SPNS1-204ENST00000352260 C14orf132Q9NPU4 83 aa12.91□□□□□ -0.34
SPNS1-204ENST00000352260 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 PRO0255Q9UI72 69 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 CELA1Q9UNI1 258 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 MGAM2Q2M2H8 2515 aa12.9□□□□□ -0.34
SPNS1-204ENST00000352260 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.35
SPNS1-204ENST00000352260 NDUFC2O95298 119 aa12.9□□□□□ -0.35
SPNS1-204ENST00000352260 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.35
SPNS1-204ENST00000352260 A0A087WYN8 130 aa12.89□□□□□ -0.35
SPNS1-204ENST00000352260 DAD1P61803 113 aa12.89□□□□□ -0.35
SPNS1-204ENST00000352260 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
SPNS1-204ENST00000352260 IGKV3D-7A0A0C4DH55 119 aa12.88□□□□□ -0.35
SPNS1-204ENST00000352260 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
SPNS1-204ENST00000352260 CCKP06307 115 aa12.87□□□□□ -0.35
SPNS1-204ENST00000352260 CYSTM1Q9H1C7 97 aa12.87□□□□□ -0.35
SPNS1-204ENST00000352260 TRBV10-3A0A0K0K1G6 114 aa12.86□□□□□ -0.35
SPNS1-204ENST00000352260 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
SPNS1-204ENST00000352260 PAX4O43316 350 aa12.86□□□□□ -0.35
SPNS1-204ENST00000352260 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
SPNS1-204ENST00000352260 JMJD7-PLA2G4BH0Y9G9 81 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms