RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 COX7CP15954 63 aa11.37□□□□□ -0.59
PTPN11-201ENST00000351677 EGFEM1PQ0D2K5 195 aa11.37□□□□□ -0.59
PTPN11-201ENST00000351677 Q6JHZ5 121 aa11.37□□□□□ -0.59
PTPN11-201ENST00000351677 IGLV9-49A0A0B4J1Y8 123 aa11.36□□□□□ -0.59
PTPN11-201ENST00000351677 FAM19A3Q7Z5A8 133 aa11.36□□□□□ -0.59
PTPN11-201ENST00000351677 PLAC8L1A1L4L8 177 aa11.36□□□□□ -0.59
PTPN11-201ENST00000351677 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
PTPN11-201ENST00000351677 FN1P02751 2386 aaKnown RBP11.35□□□□□ -0.59
PTPN11-201ENST00000351677 PRR4Q16378 134 aa11.34□□□□□ -0.59
PTPN11-201ENST00000351677 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
PTPN11-201ENST00000351677 USP9YO00507 2555 aaPredicted RBP11.34□□□□□ -0.59
PTPN11-201ENST00000351677 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
PTPN11-201ENST00000351677 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
PTPN11-201ENST00000351677 A0A087WVE0 104 aa11.33□□□□□ -0.59
PTPN11-201ENST00000351677 CASC2Q6XLA1 102 aa11.33□□□□□ -0.6
PTPN11-201ENST00000351677 LY6G6CO95867 125 aa11.33□□□□□ -0.6
PTPN11-201ENST00000351677 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
PTPN11-201ENST00000351677 M0QXV9 152 aa11.33□□□□□ -0.6
PTPN11-201ENST00000351677 SPTSSBQ8NFR3 76 aa11.32□□□□□ -0.6
PTPN11-201ENST00000351677 SEC61GP60059 68 aa11.32□□□□□ -0.6
PTPN11-201ENST00000351677 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
PTPN11-201ENST00000351677 COL4A2P08572 1712 aa11.32□□□□□ -0.6
PTPN11-201ENST00000351677 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
PTPN11-201ENST00000351677 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
PTPN11-201ENST00000351677 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
PTPN11-201ENST00000351677 Q6Q795 121 aa11.3□□□□□ -0.6
PTPN11-201ENST00000351677 LINC00315P59091 139 aa11.29□□□□□ -0.6
PTPN11-201ENST00000351677 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
PTPN11-201ENST00000351677 LINC01546A6NGU7 62 aa11.29□□□□□ -0.6
PTPN11-201ENST00000351677 A8MTW9 85 aa11.29□□□□□ -0.6
PTPN11-201ENST00000351677 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
PTPN11-201ENST00000351677 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
PTPN11-201ENST00000351677 NDUFC1O43677 76 aa11.28□□□□□ -0.6
PTPN11-201ENST00000351677 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
PTPN11-201ENST00000351677 PTPRBP23467 1997 aa11.28□□□□□ -0.6
PTPN11-201ENST00000351677 C1orf137Q5JT78 98 aa11.27□□□□□ -0.6
PTPN11-201ENST00000351677 SPTBN4Q9H254 2564 aa11.26□□□□□ -0.61
PTPN11-201ENST00000351677 REG3GQ6UW15 175 aa11.26□□□□□ -0.61
PTPN11-201ENST00000351677 LINC00337Q8N6G1 96 aa11.26□□□□□ -0.61
PTPN11-201ENST00000351677 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
PTPN11-201ENST00000351677 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
PTPN11-201ENST00000351677 Q8N2B8 174 aa11.25□□□□□ -0.61
PTPN11-201ENST00000351677 C10orf25Q5T742 122 aa11.25□□□□□ -0.61
PTPN11-201ENST00000351677 SVIPQ8NHG7 77 aa11.25□□□□□ -0.61
PTPN11-201ENST00000351677 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
PTPN11-201ENST00000351677 A0A0U1RQV1 116 aa11.24□□□□□ -0.61
PTPN11-201ENST00000351677 ATP5EP56381 51 aaPredicted RBP11.23□□□□□ -0.61
PTPN11-201ENST00000351677 COL27A1Q8IZC6 1860 aaPredicted RBP11.23□□□□□ -0.61
PTPN11-201ENST00000351677 Q9UF83 564 aa11.23□□□□□ -0.61
PTPN11-201ENST00000351677 Q6ZRU5 148 aa11.22□□□□□ -0.61
PTPN11-201ENST00000351677 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.61
PTPN11-201ENST00000351677 TRAV7A0A075B6U4 112 aa11.21□□□□□ -0.62
PTPN11-201ENST00000351677 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
PTPN11-201ENST00000351677 PCSK5Q92824 1860 aa11.2□□□□□ -0.62
PTPN11-201ENST00000351677 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
PTPN11-201ENST00000351677 LINC00846Q9NV44 126 aa11.19□□□□□ -0.62
PTPN11-201ENST00000351677 Q8N3U1 123 aa11.18□□□□□ -0.62
PTPN11-201ENST00000351677 C2orf48Q96LS8 159 aa11.18□□□□□ -0.62
PTPN11-201ENST00000351677 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
PTPN11-201ENST00000351677 LINC01561Q8N1V8 128 aa11.18□□□□□ -0.62
PTPN11-201ENST00000351677 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
PTPN11-201ENST00000351677 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
PTPN11-201ENST00000351677 ZNF462Q96JM2 2506 aa11.17□□□□□ -0.62
PTPN11-201ENST00000351677 Q8N9L7 120 aa11.16□□□□□ -0.62
PTPN11-201ENST00000351677 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
PTPN11-201ENST00000351677 DEFB116Q30KQ4 102 aa11.15□□□□□ -0.62
PTPN11-201ENST00000351677 Q9BRP9 147 aa11.15□□□□□ -0.62
PTPN11-201ENST00000351677 CIRBP-AS1Q8TBR5 109 aa11.14□□□□□ -0.63
PTPN11-201ENST00000351677 LINC00208Q96KT6 92 aa11.14□□□□□ -0.63
PTPN11-201ENST00000351677 ESRGQ1W209 222 aa11.14□□□□□ -0.63
PTPN11-201ENST00000351677 Q6ZVQ6 151 aa11.13□□□□□ -0.63
PTPN11-201ENST00000351677 POLQO75417 2590 aa11.13□□□□□ -0.63
PTPN11-201ENST00000351677 V9GYY9 64 aa11.13□□□□□ -0.63
PTPN11-201ENST00000351677 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
PTPN11-201ENST00000351677 LINC01547P58512 204 aaPredicted RBP11.13□□□□□ -0.63
PTPN11-201ENST00000351677 MTORP42345 2549 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 PRYO14603 147 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 A0A087WSZ3 146 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 FHL3Q13643 280 aa11.12□□□□□ -0.63
PTPN11-201ENST00000351677 F8WDY8 70 aa11.11□□□□□ -0.63
PTPN11-201ENST00000351677 PRLHP81277 87 aa11.11□□□□□ -0.63
PTPN11-201ENST00000351677 IGHV6-1A0A0B4J1U7 121 aa11.1□□□□□ -0.63
PTPN11-201ENST00000351677 A6NED7 52 aa11.1□□□□□ -0.63
PTPN11-201ENST00000351677 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
PTPN11-201ENST00000351677 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
PTPN11-201ENST00000351677 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
PTPN11-201ENST00000351677 FAM218AQ96MZ4 157 aa11.08□□□□□ -0.64
PTPN11-201ENST00000351677 PRR15LQ9BU68 103 aa11.08□□□□□ -0.64
PTPN11-201ENST00000351677 PCNTO95613 3336 aa11.07□□□□□ -0.64
PTPN11-201ENST00000351677 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
PTPN11-201ENST00000351677 X6R8D5 127 aa11.07□□□□□ -0.64
PTPN11-201ENST00000351677 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
PTPN11-201ENST00000351677 PRRC2CQ9Y520 2896 aaKnown RBP11.06□□□□□ -0.64
PTPN11-201ENST00000351677 PRO0461Q9UI25 63 aa11.06□□□□□ -0.64
PTPN11-201ENST00000351677 C6orf48Q9UBA6 75 aa11.05□□□□□ -0.64
PTPN11-201ENST00000351677 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
PTPN11-201ENST00000351677 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
PTPN11-201ENST00000351677 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms